Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_441 and Pf1N1B4_442 are separated by 481 nucleotides
Pf1N1B4_441 - hypothetical protein, at 523,413 to 523,679
_441
Pf1N1B4_442 - hypothetical protein, at 524,161 to 525,132
_442
Position (kb) 523
524 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 522.476 kb on - strand at 522.516 kb on + strand at 522.517 kb on - strand at 522.517 kb on - strand at 522.517 kb on - strand at 522.517 kb on - strand at 522.660 kb on + strand at 522.770 kb on - strand at 522.770 kb on - strand at 522.791 kb on + strand at 522.791 kb on + strand at 522.791 kb on + strand at 522.792 kb on - strand at 522.792 kb on - strand at 522.792 kb on - strand at 522.792 kb on - strand at 522.831 kb on - strand at 523.009 kb on + strand at 523.055 kb on + strand at 523.055 kb on + strand at 523.055 kb on + strand at 523.055 kb on + strand at 523.055 kb on + strand at 523.056 kb on - strand at 523.056 kb on - strand at 523.056 kb on - strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.059 kb on + strand at 523.060 kb on - strand at 523.060 kb on - strand at 523.060 kb on - strand at 523.060 kb on - strand at 523.060 kb on - strand at 523.156 kb on + strand at 523.156 kb on + strand at 523.156 kb on + strand at 523.156 kb on + strand at 523.156 kb on + strand at 523.156 kb on + strand at 523.156 kb on + strand at 523.157 kb on - strand at 523.157 kb on - strand at 523.157 kb on - strand at 523.157 kb on - strand at 523.157 kb on - strand at 523.157 kb on - strand at 523.168 kb on + strand at 523.168 kb on + strand at 523.169 kb on - strand at 523.281 kb on + strand at 523.281 kb on + strand at 523.281 kb on + strand at 523.282 kb on - strand at 523.282 kb on - strand at 523.282 kb on - strand at 523.326 kb on + strand at 523.326 kb on + strand at 523.360 kb on + strand at 523.360 kb on + strand at 523.360 kb on + strand at 523.360 kb on + strand at 523.360 kb on + strand at 523.361 kb on - strand at 523.361 kb on - strand at 523.361 kb on - strand at 523.361 kb on - strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.364 kb on + strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.365 kb on - strand at 523.368 kb on + strand at 523.368 kb on + strand at 523.368 kb on + strand at 523.368 kb on + strand at 523.368 kb on + strand at 523.368 kb on + strand at 523.369 kb on - strand at 523.369 kb on - strand at 523.369 kb on - strand at 523.369 kb on - strand at 523.369 kb on - strand at 523.369 kb on - strand at 523.414 kb on + strand at 523.415 kb on - strand at 523.415 kb on - strand at 523.415 kb on - strand at 523.457 kb on + strand at 523.572 kb on + strand, within Pf1N1B4_441 at 523.572 kb on + strand, within Pf1N1B4_441 at 523.573 kb on - strand, within Pf1N1B4_441 at 523.583 kb on + strand, within Pf1N1B4_441 at 523.633 kb on + strand, within Pf1N1B4_441 at 523.634 kb on - strand, within Pf1N1B4_441 at 523.720 kb on - strand at 523.720 kb on - strand at 523.720 kb on - strand at 523.816 kb on + strand at 523.816 kb on + strand at 523.816 kb on + strand at 523.816 kb on + strand at 523.816 kb on + strand at 523.817 kb on - strand at 523.817 kb on - strand at 523.817 kb on - strand at 523.817 kb on - strand at 523.817 kb on - strand at 523.927 kb on - strand at 524.113 kb on - strand at 524.292 kb on + strand, within Pf1N1B4_442 at 524.292 kb on + strand, within Pf1N1B4_442 at 524.292 kb on + strand, within Pf1N1B4_442 at 524.293 kb on - strand, within Pf1N1B4_442 at 524.293 kb on - strand at 524.293 kb on - strand, within Pf1N1B4_442 at 524.293 kb on - strand, within Pf1N1B4_442 at 524.293 kb on - strand, within Pf1N1B4_442 at 524.293 kb on - strand, within Pf1N1B4_442 at 524.293 kb on - strand at 524.361 kb on + strand, within Pf1N1B4_442 at 524.361 kb on + strand, within Pf1N1B4_442 at 524.362 kb on - strand, within Pf1N1B4_442 at 524.362 kb on - strand, within Pf1N1B4_442 at 524.362 kb on - strand, within Pf1N1B4_442 at 524.362 kb on - strand, within Pf1N1B4_442 at 524.362 kb on - strand, within Pf1N1B4_442 at 524.412 kb on + strand, within Pf1N1B4_442 at 524.412 kb on + strand, within Pf1N1B4_442 at 524.413 kb on - strand, within Pf1N1B4_442 at 524.413 kb on - strand, within Pf1N1B4_442 at 524.515 kb on - strand, within Pf1N1B4_442 at 524.515 kb on - strand, within Pf1N1B4_442 at 524.515 kb on - strand, within Pf1N1B4_442 at 524.515 kb on - strand, within Pf1N1B4_442 at 524.573 kb on + strand, within Pf1N1B4_442 at 524.574 kb on - strand, within Pf1N1B4_442 at 524.580 kb on + strand, within Pf1N1B4_442 at 524.581 kb on - strand, within Pf1N1B4_442 at 524.624 kb on + strand, within Pf1N1B4_442 at 524.624 kb on + strand, within Pf1N1B4_442 at 524.624 kb on + strand, within Pf1N1B4_442 at 524.624 kb on + strand, within Pf1N1B4_442 at 524.624 kb on + strand at 524.624 kb on + strand, within Pf1N1B4_442 at 524.624 kb on + strand, within Pf1N1B4_442 at 524.625 kb on - strand, within Pf1N1B4_442 at 524.625 kb on - strand, within Pf1N1B4_442 at 524.625 kb on - strand, within Pf1N1B4_442 at 524.625 kb on - strand, within Pf1N1B4_442 at 524.625 kb on - strand, within Pf1N1B4_442
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 522,476 - -0.1 522,516 + +0.4 522,517 - -1.8 522,517 - -1.0 522,517 - -0.4 522,517 - -0.1 522,660 + +0.9 522,770 - +0.6 522,770 - -0.0 522,791 + +1.2 522,791 + -1.0 522,791 + -0.8 522,792 - -1.6 522,792 - -1.0 522,792 - -1.1 522,792 - -1.0 522,831 - -1.7 523,009 + -0.4 523,055 + +1.2 523,055 + +0.5 523,055 + +0.6 523,055 + -0.1 523,055 + -0.8 523,056 - -0.6 523,056 - -0.6 523,056 - -1.6 523,059 + -0.5 523,059 + -1.2 523,059 + -0.6 523,059 + -0.1 523,059 + +0.5 523,059 + -1.6 523,059 + -0.9 523,059 + +0.2 523,059 + +0.0 523,059 + +1.8 523,059 + +0.2 523,060 - -0.8 523,060 - -2.2 523,060 - +1.1 523,060 - +0.6 523,060 - +0.2 523,156 + +0.9 523,156 + -0.9 523,156 + -1.6 523,156 + -0.6 523,156 + -1.8 523,156 + +0.8 523,156 + -1.1 523,157 - -3.0 523,157 - +0.2 523,157 - -0.5 523,157 - -0.0 523,157 - +0.0 523,157 - -2.0 523,168 + +1.2 523,168 + -1.4 523,169 - -1.6 523,281 + -0.4 523,281 + -1.2 523,281 + +0.6 523,282 - +0.6 523,282 - -1.1 523,282 - -0.1 523,326 + -0.4 523,326 + +0.8 523,360 + +0.8 523,360 + -1.6 523,360 + -1.2 523,360 + -1.1 523,360 + -0.1 523,361 - -1.2 523,361 - +0.0 523,361 - +2.2 523,361 - +0.1 523,364 + +1.2 523,364 + -0.4 523,364 + -0.8 523,364 + -0.9 523,364 + +0.2 523,364 + -1.1 523,364 + +1.0 523,364 + -1.1 523,364 + -2.1 523,364 + -1.7 523,364 + -1.6 523,364 + +0.2 523,365 - -0.1 523,365 - -1.0 523,365 - +0.2 523,365 - -1.4 523,365 - +0.2 523,365 - +0.4 523,365 - -0.8 523,365 - +2.2 523,365 - +0.5 523,365 - +1.2 523,365 - -1.2 523,365 - +1.2 523,365 - -1.4 523,365 - -0.8 523,365 - +0.2 523,368 + -0.2 523,368 + -0.5 523,368 + -0.9 523,368 + -0.4 523,368 + -0.4 523,368 + -0.8 523,369 - -0.7 523,369 - -0.8 523,369 - -1.1 523,369 - +0.2 523,369 - +0.5 523,369 - -0.2 523,414 + -1.4 523,415 - -0.1 523,415 - -1.1 523,415 - -0.2 523,457 + +2.2 523,572 + Pf1N1B4_441 0.60 -0.4 523,572 + Pf1N1B4_441 0.60 -0.8 523,573 - Pf1N1B4_441 0.60 -1.6 523,583 + Pf1N1B4_441 0.64 -0.8 523,633 + Pf1N1B4_441 0.82 -0.4 523,634 - Pf1N1B4_441 0.83 +0.0 523,720 - -1.6 523,720 - -0.1 523,720 - -0.1 523,816 + +0.1 523,816 + +0.5 523,816 + +0.9 523,816 + +0.6 523,816 + -2.1 523,817 - -2.0 523,817 - +1.2 523,817 - -0.5 523,817 - -1.1 523,817 - +1.2 523,927 - -1.1 524,113 - -0.3 524,292 + Pf1N1B4_442 0.13 +1.2 524,292 + Pf1N1B4_442 0.13 +0.2 524,292 + Pf1N1B4_442 0.13 +0.2 524,293 - Pf1N1B4_442 0.14 +0.2 524,293 - +1.2 524,293 - Pf1N1B4_442 0.14 -1.1 524,293 - Pf1N1B4_442 0.14 -0.2 524,293 - Pf1N1B4_442 0.14 -0.3 524,293 - Pf1N1B4_442 0.14 +0.2 524,293 - -0.4 524,361 + Pf1N1B4_442 0.21 -0.3 524,361 + Pf1N1B4_442 0.21 -0.8 524,362 - Pf1N1B4_442 0.21 +0.4 524,362 - Pf1N1B4_442 0.21 -0.2 524,362 - Pf1N1B4_442 0.21 -0.4 524,362 - Pf1N1B4_442 0.21 -0.4 524,362 - Pf1N1B4_442 0.21 -0.5 524,412 + Pf1N1B4_442 0.26 -0.8 524,412 + Pf1N1B4_442 0.26 +0.8 524,413 - Pf1N1B4_442 0.26 +0.9 524,413 - Pf1N1B4_442 0.26 -0.4 524,515 - Pf1N1B4_442 0.36 -0.1 524,515 - Pf1N1B4_442 0.36 -0.2 524,515 - Pf1N1B4_442 0.36 +0.5 524,515 - Pf1N1B4_442 0.36 +0.6 524,573 + Pf1N1B4_442 0.42 -1.1 524,574 - Pf1N1B4_442 0.42 -0.7 524,580 + Pf1N1B4_442 0.43 -0.9 524,581 - Pf1N1B4_442 0.43 -1.8 524,624 + Pf1N1B4_442 0.48 +0.2 524,624 + Pf1N1B4_442 0.48 +0.6 524,624 + Pf1N1B4_442 0.48 +0.6 524,624 + Pf1N1B4_442 0.48 +0.2 524,624 + -0.4 524,624 + Pf1N1B4_442 0.48 -0.4 524,624 + Pf1N1B4_442 0.48 -0.8 524,625 - Pf1N1B4_442 0.48 -1.1 524,625 - Pf1N1B4_442 0.48 -1.6 524,625 - Pf1N1B4_442 0.48 -1.8 524,625 - Pf1N1B4_442 0.48 -2.0 524,625 - Pf1N1B4_442 0.48 -0.1
Or see this region's nucleotide sequence