Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10320

Experiment: R2A with Selective_ion_mix_1 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Selective_ion_mix_1 1 X
2,272,337	+		LRK54_RS10315	0.13	-0.2
2,272,337	+		LRK54_RS10315	0.13	-1.4
2,272,337	+		LRK54_RS10315	0.13	-2.2
2,272,337	+		LRK54_RS10315	0.13	+0.0
2,272,337	+		LRK54_RS10315	0.13	-0.6
2,272,337	+		LRK54_RS10315	0.13	-1.8
2,272,337	+		LRK54_RS10315	0.13	+1.3
2,272,337	+		LRK54_RS10315	0.13	+0.5
2,272,337	+		LRK54_RS10315	0.13	+2.7
2,272,337	+		LRK54_RS10315	0.13	-0.2
2,272,337	+		LRK54_RS10315	0.13	-0.8
2,272,338	-		LRK54_RS10315	0.13	+0.3
2,272,338	-		LRK54_RS10315	0.13	-1.7
2,272,338	-		LRK54_RS10315	0.13	+1.2
2,272,338	-		LRK54_RS10315	0.13	-1.6
2,272,338	-		LRK54_RS10315	0.13	-0.3
2,272,338	-		LRK54_RS10315	0.13	-0.2
2,272,338	-		LRK54_RS10315	0.13	-0.8
2,272,338	-		LRK54_RS10315	0.13	-2.5
2,272,358	+		LRK54_RS10315	0.15	+1.3
2,272,359	-		LRK54_RS10315	0.15	-1.0
2,272,359	-		LRK54_RS10315	0.15	-0.2
2,272,463	+		LRK54_RS10315	0.25	-2.4
2,272,463	+		LRK54_RS10315	0.25	+0.8
2,272,463	+		LRK54_RS10315	0.25	-2.3
2,272,463	+		LRK54_RS10315	0.25	-0.8
2,272,464	-		LRK54_RS10315	0.25	-0.3
2,272,464	-		LRK54_RS10315	0.25	-0.5
2,272,464	-		LRK54_RS10315	0.25	+1.0
2,272,464	-		LRK54_RS10315	0.25	+0.7
2,272,464	-		LRK54_RS10315	0.25	-0.2
2,272,464	-		LRK54_RS10315	0.25	+0.2
2,272,464	-		LRK54_RS10315	0.25	-2.8
2,272,472	+		LRK54_RS10315	0.26	+0.3
2,272,472	+		LRK54_RS10315	0.26	-0.8
2,272,473	-		LRK54_RS10315	0.26	-0.6
2,272,473	-		LRK54_RS10315	0.26	+0.8
2,272,523	+		LRK54_RS10315	0.31	+1.5
2,272,523	+		LRK54_RS10315	0.31	+2.1
2,272,524	-		LRK54_RS10315	0.31	+1.8
2,272,524	-		LRK54_RS10315	0.31	+1.5
2,272,524	-		LRK54_RS10315	0.31	-0.7
2,272,565	+		LRK54_RS10315	0.36	-0.2
2,272,565	+		LRK54_RS10315	0.36	+1.3
2,272,565	+		LRK54_RS10315	0.36	-2.1
2,272,566	-		LRK54_RS10315	0.36	+1.0
2,272,566	-		LRK54_RS10315	0.36	-0.6
2,272,566	-		LRK54_RS10315	0.36	+2.7
2,272,566	-		LRK54_RS10315	0.36	-0.9
2,272,566	-		LRK54_RS10315	0.36	+1.6
2,272,566	-		LRK54_RS10315	0.36	+0.4
2,272,566	-		LRK54_RS10315	0.36	+1.3
2,272,566	-		LRK54_RS10315	0.36	-1.8
2,272,566	-		LRK54_RS10315	0.36	-0.2
2,272,566	-		LRK54_RS10315	0.36	-0.3
2,272,566	-		LRK54_RS10315	0.36	+0.4
2,272,566	-		LRK54_RS10315	0.36	+0.3
2,272,568	+		LRK54_RS10315	0.36	+0.3
2,272,568	+		LRK54_RS10315	0.36	-0.2
2,272,568	+		LRK54_RS10315	0.36	+0.1
2,272,569	-		LRK54_RS10315	0.36	+0.5
2,272,740	-		LRK54_RS10315	0.53	+0.8
2,272,820	+		LRK54_RS10315	0.61	+0.4
2,272,820	+		LRK54_RS10315	0.61	+0.5
2,272,821	-		LRK54_RS10315	0.61	-0.9
2,272,821	-		LRK54_RS10315	0.61	-0.9
2,272,821	-		LRK54_RS10315	0.61	-0.9
2,272,973	+		LRK54_RS10315	0.76	-0.9
2,272,973	+		LRK54_RS10315	0.76	+1.3
2,272,973	+		LRK54_RS10315	0.76	-0.5
2,272,973	+		LRK54_RS10315	0.76	+0.7
2,272,974	-		LRK54_RS10315	0.76	+0.3
2,272,974	-		LRK54_RS10315	0.76	-0.9
2,272,974	-		LRK54_RS10315	0.76	+0.0
2,272,974	-		LRK54_RS10315	0.76	-0.2
2,273,246	+				-0.2
2,273,246	+				-0.2
2,273,247	-				+0.4
2,273,658	-		LRK54_RS10320	0.26	-1.3
2,273,797	+		LRK54_RS10320	0.34	-0.9
2,273,809	+		LRK54_RS10320	0.35	+0.6
2,273,809	+		LRK54_RS10320	0.35	+1.8
2,274,001	+		LRK54_RS10320	0.46	-0.1
2,274,002	-		LRK54_RS10320	0.46	-0.5
2,274,506	-		LRK54_RS10320	0.75	-0.2
2,274,506	-		LRK54_RS10320	0.75	-0.3
2,274,662	-		LRK54_RS10320	0.85	-0.4
2,274,662	-		LRK54_RS10320	0.85	-2.2
2,274,662	-		LRK54_RS10320	0.85	+0.8
2,274,875	+				+0.1
2,274,875	+				-0.6
2,274,875	+				+0.4
2,274,876	-				-1.4
2,275,534	+		LRK54_RS10325	0.26	-0.6
2,275,534	+		LRK54_RS10325	0.26	+0.8
2,275,534	+		LRK54_RS10325	0.26	+2.5
2,275,534	+		LRK54_RS10325	0.26	+2.3
2,275,534	+		LRK54_RS10325	0.26	-1.1
2,275,535	-		LRK54_RS10325	0.26	-2.4
2,275,644	+		LRK54_RS10325	0.36	+0.7
2,275,644	+		LRK54_RS10325	0.36	-2.6
2,275,645	-		LRK54_RS10325	0.36	-0.7
2,275,645	-		LRK54_RS10325	0.36	-0.5
2,275,645	-		LRK54_RS10325	0.36	+0.0
2,275,654	+		LRK54_RS10325	0.37	+0.3
2,275,726	+		LRK54_RS10325	0.44	+0.4
2,275,727	-		LRK54_RS10325	0.44	-1.4
2,275,873	+		LRK54_RS10325	0.57	+0.1
2,275,873	+		LRK54_RS10325	0.57	-0.7
2,275,873	+		LRK54_RS10325	0.57	-0.3
2,275,873	+		LRK54_RS10325	0.57	+0.2
2,275,873	+		LRK54_RS10325	0.57	-0.6
2,275,873	+		LRK54_RS10325	0.57	-1.1
2,275,873	+		LRK54_RS10325	0.57	-0.3
2,275,873	+		LRK54_RS10325	0.57	-0.4
2,275,874	-		LRK54_RS10325	0.57	+0.9
2,275,874	-		LRK54_RS10325	0.57	+0.1
2,275,874	-		LRK54_RS10325	0.57	-0.4
2,275,874	-		LRK54_RS10325	0.57	-2.1
2,275,874	-		LRK54_RS10325	0.57	-0.2
2,275,874	-		LRK54_RS10325	0.57	-0.7
2,275,924	+		LRK54_RS10325	0.62	+0.2
2,275,924	+		LRK54_RS10325	0.62	-0.3
2,275,925	-		LRK54_RS10325	0.62	+1.1