Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09210

Experiment: R2A with Selective_ion_mix_1 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Selective_ion_mix_1 1 X
2,016,123	+		LRK54_RS09200	0.61	+1.8
2,016,123	+		LRK54_RS09200	0.61	+0.1
2,016,174	+		LRK54_RS09200	0.65	-0.0
2,016,174	+		LRK54_RS09200	0.65	-1.7
2,016,174	+		LRK54_RS09200	0.65	+0.2
2,016,174	+		LRK54_RS09200	0.65	+0.8
2,016,174	+		LRK54_RS09200	0.65	+1.8
2,016,174	+		LRK54_RS09200	0.65	+1.1
2,016,174	+		LRK54_RS09200	0.65	+0.6
2,016,174	+		LRK54_RS09200	0.65	-0.6
2,016,174	+		LRK54_RS09200	0.65	-0.5
2,016,175	-		LRK54_RS09200	0.65	-0.8
2,016,175	-		LRK54_RS09200	0.65	+0.1
2,016,175	-		LRK54_RS09200	0.65	+2.0
2,016,175	-		LRK54_RS09200	0.65	+0.6
2,016,175	-		LRK54_RS09200	0.65	-0.2
2,016,175	-		LRK54_RS09200	0.65	-0.5
2,016,175	-		LRK54_RS09200	0.65	+1.0
2,016,175	-		LRK54_RS09200	0.65	-0.6
2,016,291	+		LRK54_RS09200	0.74	+2.0
2,016,291	+		LRK54_RS09200	0.74	+0.8
2,016,291	+		LRK54_RS09200	0.74	+2.0
2,016,291	+		LRK54_RS09200	0.74	+2.5
2,016,291	+		LRK54_RS09200	0.74	-0.4
2,016,291	+		LRK54_RS09200	0.74	+0.9
2,016,291	+		LRK54_RS09200	0.74	+0.2
2,016,291	+		LRK54_RS09200	0.74	+0.6
2,016,291	+		LRK54_RS09200	0.74	+1.2
2,016,291	+		LRK54_RS09200	0.74	+0.2
2,016,291	+		LRK54_RS09200	0.74	+1.3
2,016,291	+		LRK54_RS09200	0.74	+1.0
2,016,291	+		LRK54_RS09200	0.74	-0.2
2,016,291	+		LRK54_RS09200	0.74	+1.0
2,016,291	+		LRK54_RS09200	0.74	+1.0
2,016,291	+		LRK54_RS09200	0.74	+0.0
2,016,291	+		LRK54_RS09200	0.74	+4.7
2,016,292	-		LRK54_RS09200	0.74	+1.9
2,016,292	-		LRK54_RS09200	0.74	-0.3
2,016,292	-		LRK54_RS09200	0.74	+3.6
2,016,292	-		LRK54_RS09200	0.74	-0.9
2,016,292	-		LRK54_RS09200	0.74	+0.4
2,016,292	-		LRK54_RS09200	0.74	-0.6
2,016,436	-		LRK54_RS09200	0.85	+1.7
2,016,436	-		LRK54_RS09200	0.85	+1.0
2,016,525	+				-1.7
2,016,525	+				+1.2
2,016,525	+				+2.8
2,016,525	+				+0.8
2,016,526	-				-0.0
2,016,526	-				-0.2
2,016,636	+				+1.1
2,016,636	+				+0.8
2,016,636	+				-0.7
2,016,636	+				+0.3
2,016,636	+				-0.3
2,016,636	+				+0.9
2,016,636	+				-0.7
2,016,636	+				-0.2
2,016,636	+				-0.4
2,016,636	+				+1.6
2,016,636	+				+1.2
2,016,636	+				-0.8
2,016,636	+				-0.1
2,016,636	+				-0.8
2,016,636	+				-2.5
2,016,636	+				-1.3
2,016,636	+				+1.9
2,016,636	+				-1.4
2,016,636	+				+0.4
2,016,636	+				-1.1
2,016,636	+				-1.2
2,016,636	+				+1.1
2,016,636	+				-0.9
2,016,636	+				+1.1
2,016,636	+				-1.7
2,016,636	+				+0.1
2,016,636	+				-0.4
2,016,636	+				-0.8
2,016,636	+				+1.8
2,016,636	+				+0.6
2,016,636	+				+1.0
2,016,636	+				-0.6
2,016,637	-				+0.2
2,016,637	-				-0.2
2,016,637	-				+0.2
2,016,637	-				-0.6
2,016,637	-				-1.2
2,016,637	-				+0.0
2,016,637	-				+0.6
2,016,637	-				-1.5
2,016,637	-				-0.8
2,016,637	-				+1.2
2,016,637	-				+1.5
2,016,637	-				+0.4
2,016,637	-				-0.2
2,016,637	-				-0.1
2,016,637	-				-1.7
2,016,637	-				+0.2
2,016,637	-				+0.3
2,016,637	-				-0.3
2,016,637	-				-1.8
2,016,637	-				+0.0
2,016,637	-				+0.7
2,016,637	-				-0.1
2,016,637	-				+1.7
2,016,637	-				-0.2
2,016,712	+				-1.3
2,016,712	+				+2.0
2,016,712	+				-0.4
2,016,712	+				-0.6
2,016,712	+				+1.6
2,016,712	+				+0.2
2,016,712	+				-0.0
2,016,712	+				-1.3
2,016,712	+				+0.5
2,016,712	+				+0.5
2,016,712	+				-1.2
2,016,712	+				-1.6
2,016,712	+				-0.7
2,016,713	-				+0.2
2,016,713	-				+1.0
2,016,713	-				+1.1
2,016,713	-				+0.4
2,016,713	-				-0.0
2,016,713	-				+0.3
2,016,713	-				-0.2
2,016,713	-				+0.2
2,016,713	-				-0.0
2,016,713	-				+0.3
2,016,713	-				-0.7
2,016,713	-				+0.9
2,016,727	+				-1.1
2,016,728	-				-1.2
2,016,728	-				-0.3
2,016,757	+				-1.9
2,016,757	+				-1.4
2,016,757	+				+0.7
2,016,757	+				-3.2
2,016,757	+				-1.1
2,016,757	+				+0.9
2,016,757	+				+0.6
2,016,757	+				+1.0
2,016,757	+				+0.3
2,016,757	+				-0.4
2,016,757	+				-0.1
2,016,757	+				+0.4
2,016,757	+				+0.1
2,016,757	+				-0.6
2,016,757	+				-0.4
2,016,757	+				-0.8
2,016,757	+				-1.7
2,016,757	+				-0.9
2,016,757	+				-0.3
2,016,758	-				+0.2
2,016,758	-				-1.5
2,016,758	-				+0.0
2,016,758	-				+0.6
2,016,758	-				-0.9
2,016,758	-				+0.4
2,016,758	-				+0.7
2,016,758	-				+1.2
2,016,758	-				+0.9
2,016,758	-				+0.6
2,016,774	+				-0.9
2,016,774	+				+0.2
2,016,774	+				+1.3
2,016,774	+				+0.3
2,016,774	+				-0.9
2,016,774	+				-0.2
2,016,774	+				+0.9
2,016,774	+				+0.2
2,016,774	+				-1.2
2,016,774	+				+0.6
2,016,775	-				+1.5
2,016,775	-				-0.1
2,016,775	-				+2.5
2,016,775	-				+0.1
2,016,775	-				-2.0
2,016,874	+		LRK54_RS09205	0.32	+0.0
2,016,874	+		LRK54_RS09205	0.32	-1.9
2,016,874	+		LRK54_RS09205	0.32	+0.4
2,016,874	+		LRK54_RS09205	0.32	+1.7
2,016,874	+		LRK54_RS09205	0.32	-0.5
2,016,874	+		LRK54_RS09205	0.32	+0.4
2,016,874	+		LRK54_RS09205	0.32	-0.5
2,016,874	+		LRK54_RS09205	0.32	-0.6
2,016,874	+		LRK54_RS09205	0.32	-0.4
2,016,874	+		LRK54_RS09205	0.32	-1.3
2,016,874	+		LRK54_RS09205	0.32	+1.4
2,016,874	+		LRK54_RS09205	0.32	-1.7
2,016,874	+		LRK54_RS09205	0.32	-1.0
2,016,875	-		LRK54_RS09205	0.32	-0.3
2,016,875	-		LRK54_RS09205	0.32	+0.7
2,016,875	-		LRK54_RS09205	0.32	+0.0
2,016,875	-		LRK54_RS09205	0.32	-2.0
2,016,875	-		LRK54_RS09205	0.32	-1.3
2,016,875	-		LRK54_RS09205	0.32	-0.1
2,016,875	-		LRK54_RS09205	0.32	-0.5
2,016,875	-		LRK54_RS09205	0.32	-0.6
2,016,875	-		LRK54_RS09205	0.32	-0.7
2,016,875	-		LRK54_RS09205	0.32	+2.2
2,016,875	-		LRK54_RS09205	0.32	-0.4
2,016,875	-		LRK54_RS09205	0.32	-1.2
2,016,875	-		LRK54_RS09205	0.32	-0.4
2,016,875	-		LRK54_RS09205	0.32	-0.8
2,016,875	-		LRK54_RS09205	0.32	-0.4
2,016,875	-		LRK54_RS09205	0.32	-0.3
2,016,875	-		LRK54_RS09205	0.32	-0.3
2,016,875	-		LRK54_RS09205	0.32	-0.6
2,017,057	+				-0.2
2,017,057	+				-0.6
2,017,057	+				-1.8
2,017,084	+				+2.2
2,017,084	+				+0.3
2,017,084	+				+1.1
2,017,084	+				-0.1
2,017,084	+				+0.6
2,017,084	+				+0.7
2,017,084	+				+1.0
2,017,084	+				+0.2
2,017,085	-				-0.8
2,017,085	-				+1.5
2,017,085	-				+0.5
2,017,085	-				-1.2
2,017,085	-				+0.2
2,017,085	-				-0.3
2,017,383	+		LRK54_RS09210	0.29	-0.2
2,017,383	+		LRK54_RS09210	0.29	-0.6
2,017,383	+		LRK54_RS09210	0.29	-1.0
2,017,383	+		LRK54_RS09210	0.29	-0.4
2,017,383	+		LRK54_RS09210	0.29	+0.4
2,017,383	+		LRK54_RS09210	0.29	-1.2
2,017,383	+		LRK54_RS09210	0.29	+0.3
2,017,383	+		LRK54_RS09210	0.29	+0.8
2,017,384	-		LRK54_RS09210	0.29	+1.3
2,017,384	-		LRK54_RS09210	0.29	+0.1
2,017,384	-		LRK54_RS09210	0.29	+2.5
2,017,444	+		LRK54_RS09210	0.34	+1.4
2,017,444	+		LRK54_RS09210	0.34	+0.1
2,017,444	+		LRK54_RS09210	0.34	+0.1
2,017,444	+		LRK54_RS09210	0.34	-0.9
2,017,445	-		LRK54_RS09210	0.34	+0.2
2,017,445	-		LRK54_RS09210	0.34	+0.0
2,017,445	-		LRK54_RS09210	0.34	-1.7
2,017,457	+		LRK54_RS09210	0.35	+3.3
2,017,457	+		LRK54_RS09210	0.35	+1.6
2,017,458	-		LRK54_RS09210	0.36	-0.7
2,017,483	+		LRK54_RS09210	0.38	-0.0
2,017,483	+		LRK54_RS09210	0.38	+1.6
2,017,483	+		LRK54_RS09210	0.38	+1.4
2,017,483	+		LRK54_RS09210	0.38	+0.2
2,017,483	+		LRK54_RS09210	0.38	+0.2
2,017,483	+		LRK54_RS09210	0.38	+0.2
2,017,484	-		LRK54_RS09210	0.38	-1.3
2,017,484	-		LRK54_RS09210	0.38	+1.3
2,017,484	-		LRK54_RS09210	0.38	+1.5
2,017,484	-		LRK54_RS09210	0.38	+0.9
2,017,484	-		LRK54_RS09210	0.38	+1.5
2,017,484	-		LRK54_RS09210	0.38	-0.8
2,017,540	+		LRK54_RS09210	0.43	-0.6
2,017,540	+		LRK54_RS09210	0.43	+2.4
2,017,540	+		LRK54_RS09210	0.43	+0.9
2,017,540	+		LRK54_RS09210	0.43	+0.2
2,017,540	+		LRK54_RS09210	0.43	+2.5
2,017,540	+		LRK54_RS09210	0.43	+0.9
2,017,540	+		LRK54_RS09210	0.43	+0.0
2,017,540	+		LRK54_RS09210	0.43	-0.1
2,017,541	-		LRK54_RS09210	0.43	+1.1
2,017,541	-		LRK54_RS09210	0.43	+1.6
2,017,541	-		LRK54_RS09210	0.43	+0.8
2,017,541	-		LRK54_RS09210	0.43	+0.3
2,017,541	-		LRK54_RS09210	0.43	-1.4
2,018,119	-				+0.0
2,018,119	-				-0.7
2,018,162	+				+1.0
2,018,162	+				+1.1
2,018,162	+				-0.4
2,018,162	+				+0.8
2,018,163	-				+0.8
2,018,164	+				-0.3
2,018,164	+				-0.7
2,018,164	+				+0.3
2,018,164	+				+0.6
2,018,164	+				+0.3
2,018,164	+				+1.7
2,018,164	+				+0.2
2,018,164	+				+2.0
2,018,164	+				-1.8
2,018,165	-				-1.5
2,018,165	-				-0.6
2,018,165	-				+1.9
2,018,165	-				-0.7
2,018,165	-				+0.0
2,018,165	-				+1.2
2,018,165	-				+2.0
2,018,165	-				-0.8
2,018,165	-				-0.5
2,018,165	-				+0.9
2,018,165	-				-0.9
2,018,165	-				-0.9
2,018,165	-				-0.9
2,018,165	-				+1.0
2,018,165	-				+0.2
2,018,165	-				+0.7
2,018,165	-				-0.6
2,018,165	-				-0.5
2,018,165	-				+1.2
2,018,165	-				-0.3
2,018,390	+		LRK54_RS09215	0.13	+1.7
2,018,390	+		LRK54_RS09215	0.13	+0.2
2,018,390	+		LRK54_RS09215	0.13	+1.6
2,018,390	+		LRK54_RS09215	0.13	+1.4
2,018,390	+		LRK54_RS09215	0.13	-0.2
2,018,390	+		LRK54_RS09215	0.13	-0.2
2,018,390	+		LRK54_RS09215	0.13	-1.1
2,018,391	-		LRK54_RS09215	0.13	-0.2
2,018,391	-		LRK54_RS09215	0.13	+2.3
2,018,391	-		LRK54_RS09215	0.13	-0.8
2,018,391	-		LRK54_RS09215	0.13	+0.6
2,018,391	-		LRK54_RS09215	0.13	+0.6
2,018,391	-		LRK54_RS09215	0.13	+2.2
2,018,391	-		LRK54_RS09215	0.13	+0.9
2,018,391	-		LRK54_RS09215	0.13	+0.3
2,018,432	+		LRK54_RS09215	0.16	+1.8
2,018,432	+		LRK54_RS09215	0.16	+1.7
2,018,432	+		LRK54_RS09215	0.16	+2.8
2,018,432	+		LRK54_RS09215	0.16	+2.9
2,018,432	+		LRK54_RS09215	0.16	+2.5
2,018,433	-		LRK54_RS09215	0.16	-0.3
2,018,433	-		LRK54_RS09215	0.16	+0.5
2,018,504	+		LRK54_RS09215	0.21	+0.1
2,018,504	+		LRK54_RS09215	0.21	+1.7
2,018,504	+		LRK54_RS09215	0.21	+2.1
2,018,505	-		LRK54_RS09215	0.21	+0.8
2,018,505	-		LRK54_RS09215	0.21	+3.2
2,018,505	-		LRK54_RS09215	0.21	-0.3
2,018,505	-		LRK54_RS09215	0.21	-0.0
2,018,573	+		LRK54_RS09215	0.26	+0.0
2,018,573	+		LRK54_RS09215	0.26	+1.7
2,018,573	+		LRK54_RS09215	0.26	+1.0
2,018,573	+		LRK54_RS09215	0.26	+2.0
2,018,573	+		LRK54_RS09215	0.26	+0.3
2,018,573	+		LRK54_RS09215	0.26	+0.6
2,018,573	+		LRK54_RS09215	0.26	+0.8
2,018,573	+		LRK54_RS09215	0.26	+3.1
2,018,573	+		LRK54_RS09215	0.26	+1.8
2,018,573	+		LRK54_RS09215	0.26	+3.0
2,018,573	+		LRK54_RS09215	0.26	+1.0
2,018,573	+		LRK54_RS09215	0.26	+2.0
2,018,573	+		LRK54_RS09215	0.26	+1.5
2,018,573	+		LRK54_RS09215	0.26	+1.9
2,018,573	+		LRK54_RS09215	0.26	+0.6
2,018,574	-		LRK54_RS09215	0.26	+0.2
2,018,574	-		LRK54_RS09215	0.26	-0.1
2,018,574	-		LRK54_RS09215	0.26	+0.4
2,018,574	-		LRK54_RS09215	0.26	-0.6
2,018,574	-		LRK54_RS09215	0.26	+2.0
2,018,574	-		LRK54_RS09215	0.26	-2.6
2,018,574	-		LRK54_RS09215	0.26	-0.2
2,018,574	-		LRK54_RS09215	0.26	+1.2
2,018,574	-		LRK54_RS09215	0.26	+0.3
2,018,574	-		LRK54_RS09215	0.26	+0.9
2,018,574	-		LRK54_RS09215	0.26	+0.3
2,018,574	-		LRK54_RS09215	0.26	+0.8
2,018,574	-		LRK54_RS09215	0.26	+0.3
2,018,574	-		LRK54_RS09215	0.26	+1.4
2,018,627	+		LRK54_RS09215	0.30	+2.2
2,018,628	-		LRK54_RS09215	0.30	-0.5
2,018,628	-		LRK54_RS09215	0.30	+1.0
2,018,628	-		LRK54_RS09215	0.30	+0.8
2,018,762	+		LRK54_RS09215	0.39	+1.3
2,018,762	+		LRK54_RS09215	0.39	+1.9
2,018,762	+		LRK54_RS09215	0.39	+0.8
2,018,763	-		LRK54_RS09215	0.39	+2.5
2,018,763	-		LRK54_RS09215	0.39	-0.6
2,018,763	-		LRK54_RS09215	0.39	-1.8
2,018,763	-		LRK54_RS09215	0.39	+1.3
2,018,763	-		LRK54_RS09215	0.39	+2.6
2,018,763	-		LRK54_RS09215	0.39	+1.1
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