Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4209 and Ga0059261_4210 overlap by 4 nucleotides Ga0059261_4210 and Ga0059261_4211 are separated by 117 nucleotides Ga0059261_4211 and Ga0059261_4212 are separated by 34 nucleotides
Ga0059261_4209: Ga0059261_4209 - Transglycosylase SLT domain, at 4,362,058 to 4,363,845
_4209
Ga0059261_4210: Ga0059261_4210 - Uracil-DNA glycosylase, at 4,363,842 to 4,364,579
_4210
Ga0059261_4211: Ga0059261_4211 - Dehydrogenases (flavoproteins), at 4,364,697 to 4,366,358
_4211
Ga0059261_4212: Ga0059261_4212 - TPR repeat, at 4,366,393 to 4,367,955
_4212
Position (kb) 4364
4365
4366
4367 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4363.834 kb on - strand at 4363.834 kb on - strand at 4366.356 kb on + strand at 4366.357 kb on + strand at 4366.429 kb on + strand at 4366.540 kb on + strand at 4366.764 kb on + strand, within Ga0059261_4212 at 4366.809 kb on + strand, within Ga0059261_4212 at 4366.819 kb on + strand, within Ga0059261_4212 at 4366.819 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.962 kb on + strand, within Ga0059261_4212 at 4366.962 kb on + strand, within Ga0059261_4212 at 4367.218 kb on + strand, within Ga0059261_4212 at 4367.269 kb on + strand, within Ga0059261_4212 at 4367.269 kb on + strand, within Ga0059261_4212
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium lysine 5 mM remove 4,363,834 - -0.6 4,363,834 - -0.6 4,366,356 + +0.3 4,366,357 + -0.4 4,366,429 + -2.5 4,366,540 + +0.9 4,366,764 + Ga0059261_4212 0.24 -2.2 4,366,809 + Ga0059261_4212 0.27 -0.1 4,366,819 + Ga0059261_4212 0.27 -0.5 4,366,819 + Ga0059261_4212 0.27 +0.8 4,366,821 + Ga0059261_4212 0.27 +0.1 4,366,821 + Ga0059261_4212 0.27 -2.6 4,366,821 + Ga0059261_4212 0.27 -1.2 4,366,821 + Ga0059261_4212 0.27 -0.5 4,366,821 + Ga0059261_4212 0.27 -0.6 4,366,821 + Ga0059261_4212 0.27 +2.9 4,366,821 + Ga0059261_4212 0.27 -0.9 4,366,821 + Ga0059261_4212 0.27 -0.6 4,366,821 + Ga0059261_4212 0.27 -0.1 4,366,962 + Ga0059261_4212 0.36 -0.4 4,366,962 + Ga0059261_4212 0.36 -0.7 4,367,218 + Ga0059261_4212 0.53 +0.1 4,367,269 + Ga0059261_4212 0.56 -0.2 4,367,269 + Ga0059261_4212 0.56 +0.8
Or see this region's nucleotide sequence