Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4059

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
4,185,806	+		Ga0059261_4057	0.76	-0.5
4,185,847	+		Ga0059261_4057	0.81	+0.4
4,185,847	+		Ga0059261_4057	0.81	-1.2
4,185,847	+		Ga0059261_4057	0.81	+0.1
4,185,848	-		Ga0059261_4057	0.81	-0.1
4,185,848	-		Ga0059261_4057	0.81	+1.4
4,185,848	-		Ga0059261_4057	0.81	-0.2
4,185,955	-				-0.9
4,186,013	+				-1.2
4,186,014	-				-0.2
4,186,014	-				-0.9
4,186,028	+				-0.6
4,186,029	-				-0.2
4,186,154	+		Ga0059261_4058	0.42	-0.5
4,186,155	-		Ga0059261_4058	0.42	-0.7
4,186,155	-		Ga0059261_4058	0.42	-0.5
4,186,228	+		Ga0059261_4058	0.64	+0.7
4,186,228	+		Ga0059261_4058	0.64	-0.3
4,186,228	+		Ga0059261_4058	0.64	-0.2
4,186,228	+		Ga0059261_4058	0.64	+0.3
4,186,229	-		Ga0059261_4058	0.64	-0.5
4,186,232	+		Ga0059261_4058	0.65	+1.4
4,186,232	+		Ga0059261_4058	0.65	+0.7
4,186,232	+		Ga0059261_4058	0.65	-0.3
4,186,232	+		Ga0059261_4058	0.65	-0.1
4,186,232	+		Ga0059261_4058	0.65	+0.4
4,186,233	-		Ga0059261_4058	0.65	+1.1
4,186,233	-		Ga0059261_4058	0.65	+0.1
4,186,233	-		Ga0059261_4058	0.65	-1.1
4,186,340	+				-0.6
4,186,341	-				-0.2
4,186,341	-				+0.0
4,186,341	-				-2.1
4,186,341	-				-1.3
4,186,341	-				-0.6
4,186,341	-				-0.6
4,186,571	+				+0.4
4,186,608	+				+0.1
4,186,608	+				+0.4
4,186,609	-				+0.9
4,186,609	-				-1.1
4,186,609	-				+0.6
4,186,609	-				-0.3
4,186,609	-				+0.9
4,186,609	-				+0.2
4,186,626	+				+1.3
4,186,626	+				-0.3
4,186,627	-				+0.5
4,186,630	-				+1.3
4,186,669	-				-0.3
4,186,669	-				-0.3
4,186,764	-				-0.1
4,186,764	-				-0.6
4,186,983	+		Ga0059261_4059	0.29	-0.2
4,187,099	+		Ga0059261_4059	0.44	-0.2
4,187,100	-		Ga0059261_4059	0.44	-0.1
4,187,129	+		Ga0059261_4059	0.48	-0.6
4,187,129	+		Ga0059261_4059	0.48	+0.3
4,187,130	-		Ga0059261_4059	0.48	+0.5
4,187,130	-		Ga0059261_4059	0.48	-0.1
4,187,130	-		Ga0059261_4059	0.48	-0.3
4,187,270	+		Ga0059261_4059	0.66	+0.3
4,187,271	-		Ga0059261_4059	0.67	+0.2
4,187,271	-		Ga0059261_4059	0.67	+1.0
4,187,408	+		Ga0059261_4059	0.84	+0.5
4,187,408	+		Ga0059261_4059	0.84	+0.4
4,187,409	-		Ga0059261_4059	0.85	+0.6
4,187,409	-		Ga0059261_4059	0.85	-0.5
4,187,530	-				-1.9
4,187,530	-				-1.5
4,187,530	-				-0.6
4,187,556	+				+1.4
4,187,560	+				-0.4
4,187,560	+				-1.2
4,187,561	-				-2.0
4,187,561	-				-0.2
4,187,561	-				-0.6
4,187,561	-				-0.5
4,187,639	+				+0.2
4,187,841	-				+0.2
4,188,027	+		Ga0059261_4060	0.36	+0.5
4,188,027	+		Ga0059261_4060	0.36	-0.1
4,188,028	-		Ga0059261_4060	0.36	-0.1
4,188,098	+		Ga0059261_4060	0.49	+0.0
4,188,388	-				+0.2
4,188,399	+				+0.3
4,188,399	+				+0.0
4,188,400	-				+0.1
4,188,449	+				+0.4
4,188,449	+				-0.5
4,188,449	+				+0.3
4,188,449	+				-0.1
4,188,479	+				-0.4
4,188,479	+				-0.2
4,188,479	+				+0.0
4,188,479	+				+0.5
4,188,479	+				-1.1
4,188,480	-				+0.4
4,188,480	-				-1.7