Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4044

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
4,170,071	-		Ga0059261_4043	0.78	-1.8
4,170,492	+				-0.4
4,170,492	+				+0.3
4,170,492	+				-1.0
4,170,669	+				-0.5
4,170,689	+				-1.1
4,170,690	-				+0.4
4,170,700	+				+1.4
4,170,706	+				-0.3
4,170,706	+				-0.6
4,170,718	+				+0.1
4,170,719	-				+0.5
4,170,724	+				+0.0
4,170,768	+				+0.0
4,170,769	-				+0.0
4,170,769	-				-0.3
4,170,793	+				-0.6
4,170,793	+				+0.6
4,170,793	+				+0.1
4,170,794	-				+0.5
4,170,794	-				+0.6
4,170,794	-				+0.4
4,171,080	-		Ga0059261_4044	0.19	-0.4
4,171,449	+		Ga0059261_4044	0.46	+0.1
4,171,449	+		Ga0059261_4044	0.46	-0.3
4,171,449	+		Ga0059261_4044	0.46	-0.0
4,171,450	-		Ga0059261_4044	0.46	-1.0
4,171,630	+		Ga0059261_4044	0.59	+0.9
4,171,630	+		Ga0059261_4044	0.59	+0.5
4,171,631	-		Ga0059261_4044	0.59	-1.4
4,171,631	-		Ga0059261_4044	0.59	+0.7
4,171,631	-		Ga0059261_4044	0.59	+1.7
4,171,852	-		Ga0059261_4044	0.74	+0.3
4,171,878	+		Ga0059261_4044	0.76	+0.2
4,171,878	+		Ga0059261_4044	0.76	+0.1
4,171,879	-		Ga0059261_4044	0.76	-2.1
4,171,879	-		Ga0059261_4044	0.76	+0.5
4,172,117	+				+0.2
4,172,118	-				+0.3
4,172,118	-				-0.3
4,172,242	+				+0.2
4,172,242	+				+0.4
4,172,243	-				+0.1
4,172,243	-				+1.6
4,172,687	+		Ga0059261_4045	0.20	+0.5
4,172,687	+		Ga0059261_4045	0.20	-0.2
4,172,688	-		Ga0059261_4045	0.20	-0.4
4,172,689	+		Ga0059261_4045	0.20	+0.2
4,172,723	+		Ga0059261_4045	0.21	+0.5
4,172,723	+		Ga0059261_4045	0.21	+0.2
4,172,724	-		Ga0059261_4045	0.21	-0.6
4,172,724	-		Ga0059261_4045	0.21	+0.0
4,172,724	-		Ga0059261_4045	0.21	-1.4
4,172,747	+		Ga0059261_4045	0.22	-0.5
4,172,780	+				+0.2
4,172,780	+		Ga0059261_4045	0.23	-0.7
4,172,781	-		Ga0059261_4045	0.24	-0.6
4,172,785	+		Ga0059261_4045	0.24	+0.4
4,172,786	-		Ga0059261_4045	0.24	-0.9
4,172,840	+		Ga0059261_4045	0.26	+1.7
4,172,840	+		Ga0059261_4045	0.26	+0.3
4,172,923	+		Ga0059261_4045	0.29	-0.1
4,172,923	+		Ga0059261_4045	0.29	+1.5
4,172,923	+		Ga0059261_4045	0.29	+1.3
4,172,924	-		Ga0059261_4045	0.29	+0.5
4,173,044	+		Ga0059261_4045	0.34	-0.5
4,173,044	+		Ga0059261_4045	0.34	-1.2
4,173,045	-		Ga0059261_4045	0.34	-1.2
4,173,045	-		Ga0059261_4045	0.34	-0.4
4,173,152	+		Ga0059261_4045	0.39	-0.7
4,173,152	+		Ga0059261_4045	0.39	-0.6
4,173,152	+		Ga0059261_4045	0.39	-0.2
4,173,152	+		Ga0059261_4045	0.39	-0.5
4,173,152	+		Ga0059261_4045	0.39	+0.4
4,173,152	+		Ga0059261_4045	0.39	-0.4
4,173,152	+		Ga0059261_4045	0.39	+0.4
4,173,152	+		Ga0059261_4045	0.39	+0.3
4,173,152	+		Ga0059261_4045	0.39	+0.9
4,173,153	-		Ga0059261_4045	0.39	+0.4
4,173,153	-		Ga0059261_4045	0.39	+0.3
4,173,153	-		Ga0059261_4045	0.39	+0.7
4,173,154	+		Ga0059261_4045	0.39	+0.2
4,173,155	-		Ga0059261_4045	0.39	+0.1
4,173,155	-		Ga0059261_4045	0.39	-0.7
4,173,155	-		Ga0059261_4045	0.39	-2.6
4,173,155	-		Ga0059261_4045	0.39	+0.9
4,173,155	-		Ga0059261_4045	0.39	-0.4
4,173,155	-		Ga0059261_4045	0.39	-0.3
4,173,155	-		Ga0059261_4045	0.39	-0.4
4,173,155	-		Ga0059261_4045	0.39	-0.3
4,173,155	-		Ga0059261_4045	0.39	+0.1
4,173,157	+		Ga0059261_4045	0.39	+0.6
4,173,157	+		Ga0059261_4045	0.39	+0.4
4,173,157	+		Ga0059261_4045	0.39	-0.3
4,173,157	+		Ga0059261_4045	0.39	-0.3
4,173,157	+		Ga0059261_4045	0.39	+0.3
4,173,157	+		Ga0059261_4045	0.39	-0.6
4,173,157	+		Ga0059261_4045	0.39	-0.3
4,173,157	+		Ga0059261_4045	0.39	+0.1
4,173,157	+		Ga0059261_4045	0.39	-0.3
4,173,157	+		Ga0059261_4045	0.39	-0.9
4,173,157	+		Ga0059261_4045	0.39	+0.0
4,173,157	+		Ga0059261_4045	0.39	+0.2
4,173,157	+		Ga0059261_4045	0.39	-0.2
4,173,157	+		Ga0059261_4045	0.39	+0.6
4,173,157	+		Ga0059261_4045	0.39	+0.9
4,173,157	+		Ga0059261_4045	0.39	-0.6
4,173,157	+		Ga0059261_4045	0.39	-0.2
4,173,158	-		Ga0059261_4045	0.39	-0.6
4,173,158	-		Ga0059261_4045	0.39	+0.1
4,173,158	-				-1.4
4,173,158	-		Ga0059261_4045	0.39	-1.1
4,173,158	-		Ga0059261_4045	0.39	-0.6
4,173,158	-		Ga0059261_4045	0.39	-0.5
4,173,158	-		Ga0059261_4045	0.39	-0.2
4,173,158	-		Ga0059261_4045	0.39	+0.8
4,173,158	-		Ga0059261_4045	0.39	+0.2
4,173,158	-		Ga0059261_4045	0.39	-1.2
4,173,158	-		Ga0059261_4045	0.39	-0.7
4,173,158	-		Ga0059261_4045	0.39	+0.3
4,173,162	-		Ga0059261_4045	0.39	-0.3
4,173,162	-		Ga0059261_4045	0.39	+0.1
4,173,162	-		Ga0059261_4045	0.39	+0.5