Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3881 and Ga0059261_3882 are separated by 233 nucleotides Ga0059261_3882 and Ga0059261_3883 are separated by 10 nucleotides
Ga0059261_3881: Ga0059261_3881 - Osmosensitive K+ channel histidine kinase, at 3,987,090 to 3,989,744
_3881
Ga0059261_3882: Ga0059261_3882 - dimethyladenosine transferase (EC 2.1.1.-), at 3,989,978 to 3,990,067
_3882
Ga0059261_3883: Ga0059261_3883 - K+-transporting ATPase, KdpA, at 3,990,078 to 3,991,781
_3883
Position (kb)
3989
3990
3991 Strain fitness (log2 ratio)
-2
-1
0
1 at 3989.165 kb on + strand, within Ga0059261_3881 at 3989.166 kb on - strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.167 kb on + strand, within Ga0059261_3881 at 3989.168 kb on - strand, within Ga0059261_3881 at 3989.168 kb on - strand, within Ga0059261_3881 at 3989.168 kb on - strand, within Ga0059261_3881 at 3989.168 kb on - strand, within Ga0059261_3881 at 3989.168 kb on - strand, within Ga0059261_3881 at 3989.325 kb on - strand, within Ga0059261_3881 at 3989.339 kb on - strand, within Ga0059261_3881 at 3989.339 kb on - strand, within Ga0059261_3881 at 3989.339 kb on - strand, within Ga0059261_3881 at 3989.500 kb on + strand at 3989.500 kb on + strand at 3989.500 kb on + strand at 3989.500 kb on + strand at 3989.501 kb on - strand at 3989.501 kb on - strand at 3989.501 kb on - strand at 3989.756 kb on + strand at 3989.756 kb on + strand at 3989.756 kb on + strand at 3989.757 kb on - strand at 3989.757 kb on - strand at 3989.757 kb on - strand at 3989.799 kb on + strand at 3989.799 kb on + strand at 3989.799 kb on + strand at 3989.799 kb on + strand at 3989.799 kb on + strand at 3989.799 kb on + strand at 3989.809 kb on + strand at 3989.810 kb on - strand at 3989.810 kb on - strand at 3989.810 kb on - strand at 3989.810 kb on - strand at 3989.858 kb on + strand at 3989.858 kb on + strand at 3989.859 kb on - strand at 3989.951 kb on - strand at 3989.951 kb on - strand at 3990.029 kb on + strand, within Ga0059261_3882 at 3990.029 kb on + strand, within Ga0059261_3882 at 3990.029 kb on + strand, within Ga0059261_3882 at 3990.030 kb on - strand, within Ga0059261_3882 at 3990.168 kb on + strand at 3990.168 kb on + strand at 3990.168 kb on + strand at 3990.169 kb on - strand at 3990.169 kb on - strand at 3990.169 kb on - strand at 3990.169 kb on - strand at 3990.169 kb on - strand at 3990.169 kb on - strand at 3990.225 kb on + strand at 3990.225 kb on + strand at 3990.225 kb on + strand at 3990.225 kb on + strand at 3990.225 kb on + strand at 3990.226 kb on - strand at 3990.226 kb on - strand at 3990.226 kb on - strand at 3990.273 kb on + strand, within Ga0059261_3883 at 3990.284 kb on + strand, within Ga0059261_3883 at 3990.284 kb on + strand, within Ga0059261_3883 at 3990.284 kb on + strand, within Ga0059261_3883 at 3990.284 kb on + strand, within Ga0059261_3883 at 3990.285 kb on - strand, within Ga0059261_3883 at 3990.285 kb on - strand, within Ga0059261_3883 at 3990.285 kb on - strand at 3990.321 kb on + strand, within Ga0059261_3883 at 3990.321 kb on + strand, within Ga0059261_3883 at 3990.321 kb on + strand, within Ga0059261_3883 at 3990.322 kb on - strand, within Ga0059261_3883 at 3990.322 kb on - strand, within Ga0059261_3883 at 3990.416 kb on + strand, within Ga0059261_3883 at 3990.417 kb on - strand, within Ga0059261_3883 at 3990.441 kb on + strand, within Ga0059261_3883 at 3990.441 kb on + strand, within Ga0059261_3883 at 3990.441 kb on + strand, within Ga0059261_3883 at 3990.442 kb on - strand, within Ga0059261_3883 at 3990.442 kb on - strand, within Ga0059261_3883 at 3990.442 kb on - strand, within Ga0059261_3883 at 3990.615 kb on + strand, within Ga0059261_3883 at 3990.615 kb on + strand, within Ga0059261_3883 at 3990.615 kb on + strand, within Ga0059261_3883 at 3990.615 kb on + strand, within Ga0059261_3883 at 3990.615 kb on + strand, within Ga0059261_3883 at 3990.615 kb on + strand, within Ga0059261_3883 at 3990.616 kb on - strand, within Ga0059261_3883 at 3990.616 kb on - strand, within Ga0059261_3883 at 3990.642 kb on + strand, within Ga0059261_3883 at 3990.642 kb on + strand, within Ga0059261_3883 at 3990.643 kb on - strand, within Ga0059261_3883 at 3990.643 kb on - strand, within Ga0059261_3883 at 3990.643 kb on - strand, within Ga0059261_3883 at 3990.776 kb on + strand, within Ga0059261_3883 at 3990.777 kb on - strand, within Ga0059261_3883 at 3990.839 kb on + strand, within Ga0059261_3883 at 3990.984 kb on + strand, within Ga0059261_3883 at 3990.984 kb on + strand, within Ga0059261_3883 at 3991.043 kb on + strand, within Ga0059261_3883 at 3991.044 kb on - strand, within Ga0059261_3883 at 3991.044 kb on - strand, within Ga0059261_3883 at 3991.044 kb on - strand, within Ga0059261_3883
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium lysine 5 mM remove 3,989,165 + Ga0059261_3881 0.78 -0.5 3,989,166 - Ga0059261_3881 0.78 +0.4 3,989,167 + Ga0059261_3881 0.78 -0.3 3,989,167 + Ga0059261_3881 0.78 -0.4 3,989,167 + Ga0059261_3881 0.78 -0.9 3,989,167 + Ga0059261_3881 0.78 +0.5 3,989,167 + Ga0059261_3881 0.78 -0.1 3,989,167 + Ga0059261_3881 0.78 -0.3 3,989,167 + Ga0059261_3881 0.78 +0.1 3,989,167 + Ga0059261_3881 0.78 +0.5 3,989,167 + Ga0059261_3881 0.78 +0.3 3,989,168 - Ga0059261_3881 0.78 -0.1 3,989,168 - Ga0059261_3881 0.78 -0.9 3,989,168 - Ga0059261_3881 0.78 -1.0 3,989,168 - Ga0059261_3881 0.78 +0.7 3,989,168 - Ga0059261_3881 0.78 -0.4 3,989,325 - Ga0059261_3881 0.84 +0.3 3,989,339 - Ga0059261_3881 0.85 -0.4 3,989,339 - Ga0059261_3881 0.85 +0.9 3,989,339 - Ga0059261_3881 0.85 -0.8 3,989,500 + +0.1 3,989,500 + -0.0 3,989,500 + +0.4 3,989,500 + +0.2 3,989,501 - +0.3 3,989,501 - +0.4 3,989,501 - +0.1 3,989,756 + -0.2 3,989,756 + +0.2 3,989,756 + -1.1 3,989,757 - +0.2 3,989,757 - -0.1 3,989,757 - +0.5 3,989,799 + +0.6 3,989,799 + -0.3 3,989,799 + +0.1 3,989,799 + +0.3 3,989,799 + -0.4 3,989,799 + +0.1 3,989,809 + +0.3 3,989,810 - -0.0 3,989,810 - -0.6 3,989,810 - -0.6 3,989,810 - +0.3 3,989,858 + +0.2 3,989,858 + -0.1 3,989,859 - +0.3 3,989,951 - +1.6 3,989,951 - +0.2 3,990,029 + Ga0059261_3882 0.57 +0.1 3,990,029 + Ga0059261_3882 0.57 +0.9 3,990,029 + Ga0059261_3882 0.57 +0.1 3,990,030 - Ga0059261_3882 0.58 -0.0 3,990,168 + -1.4 3,990,168 + +0.6 3,990,168 + -0.1 3,990,169 - -0.1 3,990,169 - +0.2 3,990,169 - +0.8 3,990,169 - -0.1 3,990,169 - -1.1 3,990,169 - -0.2 3,990,225 + +0.2 3,990,225 + -0.4 3,990,225 + -1.0 3,990,225 + -0.2 3,990,225 + +0.3 3,990,226 - +1.6 3,990,226 - -0.1 3,990,226 - +0.4 3,990,273 + Ga0059261_3883 0.11 -0.3 3,990,284 + Ga0059261_3883 0.12 -0.4 3,990,284 + Ga0059261_3883 0.12 +0.1 3,990,284 + Ga0059261_3883 0.12 +0.1 3,990,284 + Ga0059261_3883 0.12 -0.2 3,990,285 - Ga0059261_3883 0.12 -0.5 3,990,285 - Ga0059261_3883 0.12 +0.5 3,990,285 - +0.2 3,990,321 + Ga0059261_3883 0.14 -1.8 3,990,321 + Ga0059261_3883 0.14 +0.7 3,990,321 + Ga0059261_3883 0.14 +0.1 3,990,322 - Ga0059261_3883 0.14 +0.7 3,990,322 - Ga0059261_3883 0.14 -0.7 3,990,416 + Ga0059261_3883 0.20 -0.8 3,990,417 - Ga0059261_3883 0.20 +0.0 3,990,441 + Ga0059261_3883 0.21 -1.1 3,990,441 + Ga0059261_3883 0.21 +0.3 3,990,441 + Ga0059261_3883 0.21 -0.6 3,990,442 - Ga0059261_3883 0.21 -0.4 3,990,442 - Ga0059261_3883 0.21 -1.0 3,990,442 - Ga0059261_3883 0.21 -0.6 3,990,615 + Ga0059261_3883 0.32 +0.2 3,990,615 + Ga0059261_3883 0.32 +0.1 3,990,615 + Ga0059261_3883 0.32 +1.0 3,990,615 + Ga0059261_3883 0.32 -0.4 3,990,615 + Ga0059261_3883 0.32 +0.5 3,990,615 + Ga0059261_3883 0.32 +0.4 3,990,616 - Ga0059261_3883 0.32 -0.2 3,990,616 - Ga0059261_3883 0.32 -0.4 3,990,642 + Ga0059261_3883 0.33 -0.2 3,990,642 + Ga0059261_3883 0.33 -1.0 3,990,643 - Ga0059261_3883 0.33 -0.4 3,990,643 - Ga0059261_3883 0.33 +0.2 3,990,643 - Ga0059261_3883 0.33 +0.2 3,990,776 + Ga0059261_3883 0.41 -1.2 3,990,777 - Ga0059261_3883 0.41 +0.1 3,990,839 + Ga0059261_3883 0.45 -0.4 3,990,984 + Ga0059261_3883 0.53 -0.8 3,990,984 + Ga0059261_3883 0.53 -0.2 3,991,043 + Ga0059261_3883 0.57 -0.1 3,991,044 - Ga0059261_3883 0.57 -0.6 3,991,044 - Ga0059261_3883 0.57 +0.7 3,991,044 - Ga0059261_3883 0.57 +0.7
Or see this region's nucleotide sequence