Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3526

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
3,649,591	+				+0.1
3,649,591	+				+0.9
3,649,591	+				+1.3
3,649,591	+				+0.2
3,649,591	+				+0.4
3,649,591	+				-0.0
3,649,591	+				-0.5
3,649,591	+				+0.4
3,649,591	+				+0.3
3,649,591	+				+0.7
3,649,592	-				-0.4
3,649,592	-				-0.2
3,649,592	-				+0.0
3,649,592	-				+0.9
3,649,592	-				-0.1
3,649,592	-				+1.9
3,649,592	-				-1.2
3,649,592	-				+0.4
3,649,592	-				+0.2
3,649,592	-				+0.4
3,649,592	-				-0.4
3,649,596	+				-0.1
3,649,597	-				+0.8
3,649,597	-				+0.1
3,650,419	+				-0.3
3,650,420	-				+0.3
3,650,487	+				-0.3
3,650,487	+				-0.1
3,650,487	+				-0.7
3,650,487	+				-0.3
3,650,487	+				-0.3
3,650,487	+				-0.4
3,650,487	+				-2.1
3,650,487	+				-0.5
3,650,487	+				+0.2
3,650,488	-				-0.1
3,650,488	-				-0.3
3,650,488	-				-1.3
3,650,488	-				-0.7
3,650,610	+		Ga0059261_3526	0.33	+0.2
3,650,610	+		Ga0059261_3526	0.33	+1.3
3,650,610	+		Ga0059261_3526	0.33	-0.4
3,650,610	+		Ga0059261_3526	0.33	+0.8
3,650,611	-		Ga0059261_3526	0.33	-1.0
3,650,611	-		Ga0059261_3526	0.33	+0.7
3,650,611	-		Ga0059261_3526	0.33	-1.1
3,650,611	-		Ga0059261_3526	0.33	+0.2
3,650,619	+		Ga0059261_3526	0.35	+0.3
3,650,619	+		Ga0059261_3526	0.35	-0.5
3,650,619	+		Ga0059261_3526	0.35	+0.3
3,650,619	+		Ga0059261_3526	0.35	+0.6
3,650,619	+		Ga0059261_3526	0.35	-0.8
3,650,620	-		Ga0059261_3526	0.35	+0.2
3,650,620	-		Ga0059261_3526	0.35	-1.5
3,650,620	-		Ga0059261_3526	0.35	-0.6
3,650,620	-				+0.4
3,650,652	+		Ga0059261_3526	0.44	+0.1
3,650,652	+		Ga0059261_3526	0.44	+0.7
3,650,652	+		Ga0059261_3526	0.44	-0.3
3,650,652	+		Ga0059261_3526	0.44	-0.2
3,650,652	+		Ga0059261_3526	0.44	+0.1
3,650,653	-		Ga0059261_3526	0.44	-0.1
3,650,653	-		Ga0059261_3526	0.44	-0.4
3,650,653	-		Ga0059261_3526	0.44	+0.9
3,650,653	-		Ga0059261_3526	0.44	-0.1
3,650,653	-		Ga0059261_3526	0.44	+0.2
3,650,700	+		Ga0059261_3526	0.56	+0.8
3,650,700	+		Ga0059261_3526	0.56	+0.7
3,650,700	+		Ga0059261_3526	0.56	+0.0
3,650,700	+		Ga0059261_3526	0.56	+0.3
3,650,700	+		Ga0059261_3526	0.56	-0.2
3,650,700	+		Ga0059261_3526	0.56	-0.4
3,650,700	+		Ga0059261_3526	0.56	-0.0
3,650,701	-		Ga0059261_3526	0.56	+0.1
3,650,701	-		Ga0059261_3526	0.56	+0.0
3,650,701	-		Ga0059261_3526	0.56	+0.6
3,650,701	-		Ga0059261_3526	0.56	+0.1
3,650,878	-				-0.6
3,650,878	-				+1.9
3,650,878	-				-0.7
3,651,089	+				-0.6
3,651,089	+				+0.2
3,651,171	+				-0.5
3,651,171	+				-0.5
3,651,172	-				+0.9
3,651,188	+				-0.0
3,651,188	+				-0.5
3,651,188	+				-0.6
3,651,188	+				-0.4
3,651,188	+				-2.0
3,651,188	+				+0.5
3,651,188	+				-0.6
3,651,188	+				-0.1
3,651,188	+				+0.7
3,651,188	+				-0.4
3,651,188	+				+2.4
3,651,188	+				+0.2
3,651,189	-				+0.9
3,651,189	-				+0.3
3,651,189	-				+0.2
3,651,189	-				-0.3
3,651,189	-				+0.3
3,651,189	-				+0.1
3,651,189	-				-2.5
3,651,189	-				+1.1
3,651,232	+				+0.0
3,651,232	+				+0.1
3,651,239	+				-0.4
3,651,240	-		Ga0059261_3529	0.10	+0.9
3,651,240	-		Ga0059261_3529	0.10	-0.1
3,651,240	-		Ga0059261_3529	0.10	+1.4
3,651,240	-		Ga0059261_3529	0.10	-0.7
3,651,292	-		Ga0059261_3529	0.14	+0.5
3,651,345	+		Ga0059261_3529	0.17	+0.9
3,651,358	+		Ga0059261_3529	0.18	+0.3
3,651,359	-		Ga0059261_3529	0.18	-0.0
3,651,649	+		Ga0059261_3529	0.37	+1.9
3,651,651	+		Ga0059261_3529	0.37	-0.8
3,651,651	+		Ga0059261_3529	0.37	+0.2
3,651,651	+		Ga0059261_3529	0.37	+0.1
3,651,651	+		Ga0059261_3529	0.37	+0.4
3,651,651	+		Ga0059261_3529	0.37	-1.7
3,651,651	+		Ga0059261_3529	0.37	+0.3
3,651,651	+		Ga0059261_3529	0.37	-0.5
3,651,651	+		Ga0059261_3529	0.37	+0.1
3,651,651	+		Ga0059261_3529	0.37	-1.0
3,651,651	+		Ga0059261_3529	0.37	+0.5
3,651,651	+		Ga0059261_3529	0.37	+0.4
3,651,652	-		Ga0059261_3529	0.37	+1.2
3,651,652	-		Ga0059261_3529	0.37	+0.2
3,651,652	-		Ga0059261_3529	0.37	-0.1
3,651,652	-		Ga0059261_3529	0.37	+0.4
3,651,652	-		Ga0059261_3529	0.37	+0.1
3,651,652	-		Ga0059261_3529	0.37	-0.4
3,651,652	-		Ga0059261_3529	0.37	-0.7
3,651,652	-		Ga0059261_3529	0.37	+0.2
3,651,652	-		Ga0059261_3529	0.37	-1.2
3,651,652	-		Ga0059261_3529	0.37	-0.3
3,651,652	-		Ga0059261_3529	0.37	-0.5
3,651,652	-		Ga0059261_3529	0.37	-1.1
3,651,652	-		Ga0059261_3529	0.37	-2.0
3,651,652	-		Ga0059261_3529	0.37	-0.4
3,651,652	-		Ga0059261_3529	0.37	+0.4
3,651,652	-		Ga0059261_3529	0.37	-0.6
3,651,654	+		Ga0059261_3529	0.38	+0.0
3,651,654	+		Ga0059261_3529	0.38	-1.0
3,651,654	+		Ga0059261_3529	0.38	-0.2
3,651,654	+		Ga0059261_3529	0.38	-0.2
3,651,654	+		Ga0059261_3529	0.38	-0.1
3,651,654	+		Ga0059261_3529	0.38	+0.1
3,651,654	+		Ga0059261_3529	0.38	-0.0
3,651,655	-		Ga0059261_3529	0.38	+0.6
3,651,655	-		Ga0059261_3529	0.38	+2.2
3,651,655	-		Ga0059261_3529	0.38	-0.3
3,651,655	-		Ga0059261_3529	0.38	+0.1
3,651,655	-		Ga0059261_3529	0.38	-0.1
3,651,655	-		Ga0059261_3529	0.38	+0.1
3,651,655	-		Ga0059261_3529	0.38	+0.1
3,651,655	-		Ga0059261_3529	0.38	-0.4
3,651,655	-		Ga0059261_3529	0.38	+0.1
3,651,697	+		Ga0059261_3529	0.40	+0.4
3,651,697	+		Ga0059261_3529	0.40	+0.2
3,651,697	+		Ga0059261_3529	0.40	-0.8
3,651,697	+		Ga0059261_3529	0.40	+0.4
3,651,697	+		Ga0059261_3529	0.40	+0.9
3,651,697	+		Ga0059261_3529	0.40	-0.5
3,651,697	+		Ga0059261_3529	0.40	-0.2
3,651,697	+		Ga0059261_3529	0.40	+1.6
3,651,697	+		Ga0059261_3529	0.40	+0.2
3,651,698	-		Ga0059261_3529	0.41	-2.1
3,651,698	-		Ga0059261_3529	0.41	+1.1
3,651,698	-		Ga0059261_3529	0.41	+0.2
3,651,698	-				-1.1
3,651,698	-		Ga0059261_3529	0.41	+0.2
3,651,698	-		Ga0059261_3529	0.41	-0.7
3,651,825	-		Ga0059261_3529	0.49	+0.4
3,651,825	-		Ga0059261_3529	0.49	+0.0
3,651,825	-		Ga0059261_3529	0.49	+0.9