Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3187

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
3,320,540	-				-0.4
3,320,635	-		Ga0059261_3186	0.58	-1.3
3,320,635	-		Ga0059261_3186	0.58	+0.4
3,320,635	-		Ga0059261_3186	0.58	-0.2
3,320,812	+		Ga0059261_3186	0.67	-0.5
3,320,813	-		Ga0059261_3186	0.67	-0.5
3,320,813	-		Ga0059261_3186	0.67	-0.3
3,320,883	+		Ga0059261_3186	0.71	+0.1
3,321,308	+				-0.3
3,321,440	-				+0.3
3,321,440	-				-0.2
3,321,440	-				+1.0
3,321,440	-				-0.8
3,321,448	+				+1.0
3,321,448	+				+0.6
3,321,448	+				-0.5
3,321,448	+				-0.3
3,321,448	+				-0.6
3,321,449	-				-0.4
3,321,449	-				+0.5
3,321,449	-				-0.2
3,321,449	-				+0.3
3,321,449	-				+0.4
3,321,491	+				+1.0
3,321,497	+				-0.6
3,321,498	-				+0.1
3,321,701	+		Ga0059261_3187	0.20	+0.2
3,321,701	+		Ga0059261_3187	0.20	+0.3
3,321,701	+		Ga0059261_3187	0.20	+0.1
3,321,935	+		Ga0059261_3187	0.45	+0.6
3,321,935	+		Ga0059261_3187	0.45	-0.3
3,321,936	-		Ga0059261_3187	0.45	+0.4
3,321,936	-		Ga0059261_3187	0.45	+0.2
3,321,936	-		Ga0059261_3187	0.45	-0.1
3,321,936	-				-0.8
3,321,985	-		Ga0059261_3187	0.50	+0.3
3,321,987	-		Ga0059261_3187	0.50	+0.3
3,322,615	+		Ga0059261_3188	0.17	+0.4
3,322,615	+				-1.6
3,322,615	+		Ga0059261_3188	0.17	-0.1
3,322,615	+		Ga0059261_3188	0.17	+1.0
3,322,615	+		Ga0059261_3188	0.17	-0.3
3,322,615	+		Ga0059261_3188	0.17	-0.6
3,322,616	-		Ga0059261_3188	0.17	-0.6
3,322,616	-		Ga0059261_3188	0.17	+0.3
3,322,616	-		Ga0059261_3188	0.17	+0.8
3,322,616	-		Ga0059261_3188	0.17	-0.4
3,322,616	-		Ga0059261_3188	0.17	-0.3
3,322,616	-		Ga0059261_3188	0.17	+0.4
3,322,616	-		Ga0059261_3188	0.17	-0.0
3,322,616	-		Ga0059261_3188	0.17	+0.6
3,322,616	-		Ga0059261_3188	0.17	-0.5
3,322,647	-		Ga0059261_3188	0.20	-0.1
3,322,699	+		Ga0059261_3188	0.26	+0.1
3,322,699	+		Ga0059261_3188	0.26	+0.4
3,322,699	+		Ga0059261_3188	0.26	-0.2
3,322,699	+		Ga0059261_3188	0.26	-0.8
3,322,700	-		Ga0059261_3188	0.26	+0.1
3,322,700	-		Ga0059261_3188	0.26	+0.2
3,322,709	-		Ga0059261_3188	0.27	+0.4
3,322,732	+		Ga0059261_3188	0.30	-0.4
3,322,733	-		Ga0059261_3188	0.30	-0.3
3,322,733	-		Ga0059261_3188	0.30	-0.3
3,322,741	+		Ga0059261_3188	0.31	+0.1
3,322,742	-		Ga0059261_3188	0.31	+0.5
3,322,742	-		Ga0059261_3188	0.31	+0.0
3,322,742	-		Ga0059261_3188	0.31	-0.3
3,322,900	+		Ga0059261_3188	0.48	-0.3
3,322,900	+		Ga0059261_3188	0.48	+0.4
3,322,901	-		Ga0059261_3188	0.48	+0.1
3,322,901	-		Ga0059261_3188	0.48	+0.8
3,322,901	-		Ga0059261_3188	0.48	-0.3
3,322,901	-		Ga0059261_3188	0.48	-0.2
3,322,901	-		Ga0059261_3188	0.48	+0.2
3,322,901	-		Ga0059261_3188	0.48	-0.6
3,322,901	-		Ga0059261_3188	0.48	-0.2
3,323,004	+		Ga0059261_3188	0.59	-0.0
3,323,026	+		Ga0059261_3188	0.62	-0.3
3,323,026	+		Ga0059261_3188	0.62	+1.1
3,323,027	-		Ga0059261_3188	0.62	-0.2
3,323,027	-		Ga0059261_3188	0.62	-0.0
3,323,032	+		Ga0059261_3188	0.62	+0.4
3,323,032	+		Ga0059261_3188	0.62	+0.3
3,323,032	+		Ga0059261_3188	0.62	+0.1
3,323,032	+		Ga0059261_3188	0.62	+0.4
3,323,032	+		Ga0059261_3188	0.62	-0.5
3,323,032	+		Ga0059261_3188	0.62	-0.1
3,323,033	-		Ga0059261_3188	0.63	+0.3
3,323,033	-		Ga0059261_3188	0.63	+0.1
3,323,033	-		Ga0059261_3188	0.63	+0.2
3,323,033	-		Ga0059261_3188	0.63	+0.4
3,323,033	-		Ga0059261_3188	0.63	-0.1
3,323,062	+		Ga0059261_3188	0.66	+0.3
3,323,063	-		Ga0059261_3188	0.66	-0.2
3,323,063	-		Ga0059261_3188	0.66	-0.5
3,323,063	-		Ga0059261_3188	0.66	-0.0
3,323,063	-		Ga0059261_3188	0.66	+1.2
3,323,063	-		Ga0059261_3188	0.66	+0.3
3,323,063	-				+1.0
3,323,063	-		Ga0059261_3188	0.66	+0.3
3,323,063	-		Ga0059261_3188	0.66	+0.1
3,323,068	+		Ga0059261_3188	0.66	-0.7
3,323,068	+		Ga0059261_3188	0.66	+0.4
3,323,068	+		Ga0059261_3188	0.66	+1.0
3,323,068	+		Ga0059261_3188	0.66	+0.5
3,323,069	-		Ga0059261_3188	0.66	+0.3
3,323,069	-		Ga0059261_3188	0.66	+0.5
3,323,069	-		Ga0059261_3188	0.66	-0.2
3,323,069	-		Ga0059261_3188	0.66	-0.1
3,323,069	-		Ga0059261_3188	0.66	+0.5
3,323,069	-		Ga0059261_3188	0.66	-0.8
3,323,069	-		Ga0059261_3188	0.66	-1.0
3,323,384	+				+0.5
3,323,384	+				-0.6
3,323,384	+				-0.8
3,323,384	+				-0.5
3,323,384	+				-0.3
3,323,385	-				-0.6
3,323,385	-				-0.0
3,323,385	-				+0.3
3,323,386	+				+0.0
3,323,386	+				+0.7
3,323,386	+				+0.0
3,323,386	+				+0.5
3,323,387	-				+0.1
3,323,387	-				-0.0
3,323,387	-				+0.6
3,323,416	+				+0.3
3,323,417	-				+0.6