Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3131 and Ga0059261_3132 are separated by 252 nucleotides Ga0059261_3132 and Ga0059261_3133 overlap by 4 nucleotides
Ga0059261_3131: Ga0059261_3131 - Nucleoside-diphosphate-sugar epimerases, at 3,273,640 to 3,274,662
_3131
Ga0059261_3132: Ga0059261_3132 - hypothetical protein, at 3,274,915 to 3,275,436
_3132
Ga0059261_3133: Ga0059261_3133 - UTP--glucose-1-phosphate uridylyltransferase, at 3,275,433 to 3,276,311
_3133
Position (kb)
3274
3275
3276 Strain fitness (log2 ratio)
-1
0
1 at 3274.669 kb on - strand at 3274.694 kb on - strand at 3274.694 kb on - strand at 3274.750 kb on + strand at 3274.750 kb on + strand at 3274.750 kb on + strand at 3274.750 kb on + strand at 3274.750 kb on + strand at 3274.750 kb on + strand at 3274.750 kb on + strand at 3274.750 kb on + strand at 3274.750 kb on + strand at 3274.751 kb on - strand at 3274.751 kb on - strand at 3274.751 kb on - strand at 3274.751 kb on - strand at 3274.826 kb on - strand at 3274.933 kb on + strand at 3274.934 kb on - strand at 3274.934 kb on - strand at 3274.934 kb on - strand at 3275.062 kb on + strand, within Ga0059261_3132 at 3275.062 kb on + strand, within Ga0059261_3132 at 3275.147 kb on - strand, within Ga0059261_3132 at 3275.181 kb on - strand, within Ga0059261_3132 at 3275.233 kb on + strand, within Ga0059261_3132 at 3275.234 kb on - strand, within Ga0059261_3132 at 3275.281 kb on - strand, within Ga0059261_3132 at 3275.281 kb on - strand, within Ga0059261_3132 at 3275.281 kb on - strand, within Ga0059261_3132 at 3275.350 kb on + strand, within Ga0059261_3132 at 3275.351 kb on - strand, within Ga0059261_3132 at 3275.351 kb on - strand, within Ga0059261_3132 at 3275.351 kb on - strand, within Ga0059261_3132 at 3276.309 kb on + strand at 3276.330 kb on - strand at 3276.330 kb on - strand at 3276.368 kb on - strand at 3276.371 kb on + strand at 3276.372 kb on - strand at 3276.405 kb on + strand at 3276.405 kb on + strand at 3276.406 kb on - strand at 3276.406 kb on - strand at 3276.422 kb on + strand at 3276.423 kb on - strand at 3276.429 kb on + strand at 3276.429 kb on + strand at 3276.429 kb on + strand at 3276.429 kb on + strand at 3276.429 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium lysine 5 mM remove 3,274,669 - -0.1 3,274,694 - +0.4 3,274,694 - +1.0 3,274,750 + +0.6 3,274,750 + -0.4 3,274,750 + -0.7 3,274,750 + +0.1 3,274,750 + -0.1 3,274,750 + +0.1 3,274,750 + -0.2 3,274,750 + +0.1 3,274,750 + -0.6 3,274,751 - +0.0 3,274,751 - -0.3 3,274,751 - -0.3 3,274,751 - +0.3 3,274,826 - +0.3 3,274,933 + -0.3 3,274,934 - +0.3 3,274,934 - -1.2 3,274,934 - +0.0 3,275,062 + Ga0059261_3132 0.28 -0.4 3,275,062 + Ga0059261_3132 0.28 -0.0 3,275,147 - Ga0059261_3132 0.44 -0.1 3,275,181 - Ga0059261_3132 0.51 +0.4 3,275,233 + Ga0059261_3132 0.61 -0.5 3,275,234 - Ga0059261_3132 0.61 +1.6 3,275,281 - Ga0059261_3132 0.70 +0.0 3,275,281 - Ga0059261_3132 0.70 +0.6 3,275,281 - Ga0059261_3132 0.70 +0.2 3,275,350 + Ga0059261_3132 0.83 +0.3 3,275,351 - Ga0059261_3132 0.84 +0.5 3,275,351 - Ga0059261_3132 0.84 +0.3 3,275,351 - Ga0059261_3132 0.84 +0.1 3,276,309 + -0.8 3,276,330 - +0.1 3,276,330 - +1.2 3,276,368 - +0.5 3,276,371 + -0.5 3,276,372 - -0.1 3,276,405 + +0.4 3,276,405 + -0.0 3,276,406 - -0.3 3,276,406 - -0.4 3,276,422 + -0.2 3,276,423 - -0.1 3,276,429 + -0.2 3,276,429 + -0.0 3,276,429 + -0.2 3,276,429 + -0.7 3,276,429 + +0.1
Or see this region's nucleotide sequence