Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2951

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
3,060,553	+		Ga0059261_2948	0.76	+0.0
3,060,711	+				-0.0
3,060,711	+				-0.4
3,060,711	+				-0.0
3,060,712	-				-0.2
3,060,712	-				-0.3
3,060,712	-				+1.5
3,060,712	-				-0.3
3,060,732	-				-0.0
3,060,841	+		Ga0059261_2949	0.19	+0.4
3,060,841	+		Ga0059261_2949	0.19	+0.4
3,060,841	+		Ga0059261_2949	0.19	-0.1
3,060,841	+				+0.0
3,060,841	+		Ga0059261_2949	0.19	-0.7
3,060,841	+		Ga0059261_2949	0.19	-0.4
3,060,842	-		Ga0059261_2949	0.19	+0.3
3,060,842	-		Ga0059261_2949	0.19	-0.5
3,060,842	-		Ga0059261_2949	0.19	+0.5
3,061,131	+				-0.0
3,061,131	+				-0.0
3,061,157	+				-0.7
3,061,157	+				-1.2
3,061,157	+				+0.2
3,061,157	+				-0.7
3,061,157	+				-0.5
3,061,157	+				+0.0
3,061,157	+				+0.1
3,061,157	+				-0.0
3,061,157	+				-1.0
3,061,157	+				+0.0
3,061,157	+				-0.6
3,061,157	+				-0.1
3,061,157	+				+0.0
3,061,158	-				+0.8
3,061,158	-				+1.3
3,061,158	-				-0.9
3,061,158	-				-0.1
3,061,158	-				+0.7
3,061,158	-				+0.3
3,061,158	-				+0.3
3,061,158	-				-0.2
3,061,158	-				-0.3
3,061,158	-				-0.5
3,061,158	-				-1.0
3,061,158	-				+1.1
3,061,158	-				+0.0
3,061,159	+				+1.0
3,061,159	+				+0.3
3,061,159	+				-0.4
3,061,159	+				+0.2
3,061,159	+				-0.8
3,061,159	+				-0.3
3,061,159	+				+0.8
3,061,159	+				-0.2
3,061,159	+				-0.7
3,061,159	+				+0.2
3,061,159	+				-0.8
3,061,159	+				+0.5
3,061,159	+				-0.3
3,061,159	+				+0.3
3,061,159	+				-0.9
3,061,159	+				+0.3
3,061,159	+				+0.9
3,061,159	+				-0.1
3,061,159	+				-0.6
3,061,159	+				+0.1
3,061,159	+				-0.7
3,061,159	+				+0.5
3,061,159	+				+1.0
3,061,159	+				+2.6
3,061,159	+				+0.5
3,061,159	+				+1.4
3,061,159	+				-0.3
3,061,159	+				-0.5
3,061,159	+				-0.5
3,061,159	+				-0.1
3,061,159	+				+1.2
3,061,159	+				-0.1
3,061,159	+				+0.3
3,061,159	+				-0.3
3,061,159	+				-1.4
3,061,159	+				-0.5
3,061,159	+				+1.5
3,061,159	+				+0.5
3,061,160	-				+0.4
3,061,160	-				-0.4
3,061,160	-				+0.2
3,061,160	-				+0.1
3,061,160	-				-0.5
3,061,160	-				-0.5
3,061,160	-				-0.4
3,061,160	-				-0.3
3,061,160	-				-0.4
3,061,160	-				+0.0
3,061,160	-				+1.2
3,061,160	-				-0.1
3,061,160	-				+1.0
3,061,160	-				+0.5
3,061,160	-				-0.1
3,061,160	-				-1.0
3,061,160	-				+1.2
3,061,160	-				-0.5
3,061,160	-				-1.0
3,061,160	-				+0.7
3,061,160	-				+0.5
3,061,160	-				+1.2
3,061,160	-				+0.3
3,061,160	-				-0.3
3,061,160	-				-1.4
3,061,160	-				+0.4
3,061,161	+				-0.0
3,061,161	+				+0.1
3,061,161	+				+0.0
3,061,161	+				-1.1
3,061,161	+				-0.7
3,061,161	+				-0.3
3,061,161	+				+0.3
3,061,161	+				+0.8
3,061,161	+				+0.5
3,061,161	+				-0.2
3,061,162	-				-0.7
3,061,162	-				-0.8
3,061,162	-				-0.3
3,061,162	-				+0.5
3,061,162	-				-0.3
3,061,162	-				-0.4
3,061,162	-				+1.0
3,061,162	-				-0.8
3,061,162	-				-0.6
3,061,162	-				-0.7
3,061,162	-				+0.6
3,061,162	-				+0.7
3,061,162	-				+0.2
3,061,242	+				-0.9
3,061,242	+				+0.3
3,061,242	+				-1.3
3,061,242	+				+0.4
3,061,242	+				+1.0
3,061,242	+				+1.5
3,061,243	-				+0.6
3,061,243	-				+1.0
3,061,243	-				-0.4
3,061,243	-				-1.2
3,061,264	+				-0.7
3,061,264	+				+0.7
3,061,264	+				-0.1
3,061,264	+				+0.0
3,061,264	+				-0.4
3,061,264	+				-1.0
3,061,265	-				-1.0
3,061,265	-				+0.2
3,061,265	-				+0.2
3,061,265	-				-0.3
3,061,265	-				+0.5
3,061,265	-				+0.4
3,061,265	-				+0.3
3,061,404	+		Ga0059261_2950	0.49	-1.0
3,061,404	+		Ga0059261_2950	0.49	+0.5
3,061,404	+		Ga0059261_2950	0.49	-0.6
3,061,404	+		Ga0059261_2950	0.49	-0.3
3,061,404	+		Ga0059261_2950	0.49	-0.1
3,061,404	+		Ga0059261_2950	0.49	-0.8
3,061,405	-		Ga0059261_2950	0.49	+0.2
3,061,405	-		Ga0059261_2950	0.49	+0.0
3,061,405	-		Ga0059261_2950	0.49	+0.7
3,061,405	-		Ga0059261_2950	0.49	-0.4
3,061,405	-		Ga0059261_2950	0.49	-0.5
3,061,456	+		Ga0059261_2950	0.67	+0.6
3,061,456	+		Ga0059261_2950	0.67	-1.5
3,061,457	-		Ga0059261_2950	0.67	-0.2
3,061,457	-		Ga0059261_2950	0.67	-0.7
3,061,457	-		Ga0059261_2950	0.67	-0.2
3,061,457	-		Ga0059261_2950	0.67	-0.7
3,061,457	-		Ga0059261_2950	0.67	-0.5
3,061,458	+		Ga0059261_2950	0.68	-1.3
3,061,459	-		Ga0059261_2950	0.68	+0.1
3,061,459	-		Ga0059261_2950	0.68	-0.4
3,061,459	-		Ga0059261_2950	0.68	-0.1
3,061,459	-		Ga0059261_2950	0.68	-0.1
3,061,565	+				+0.1
3,061,769	+		Ga0059261_2951	0.52	-0.3
3,061,770	-		Ga0059261_2951	0.52	+0.8
3,062,078	+		Ga0059261_2952	0.19	-0.2
3,062,078	+		Ga0059261_2952	0.19	-0.1
3,062,079	-		Ga0059261_2952	0.19	-0.8
3,062,079	-		Ga0059261_2952	0.19	-0.1
3,062,172	-		Ga0059261_2952	0.36	-1.0
3,062,210	-		Ga0059261_2952	0.43	+0.2
3,062,492	+				-0.6
3,062,508	-				+0.4
3,062,551	-				-0.7
3,062,577	-				+0.6
3,062,577	-				-0.6
3,062,577	-				-0.7
3,062,595	+				-0.1