Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2933

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
3,041,855	+		Ga0059261_2932	0.69	-0.2
3,041,855	+		Ga0059261_2932	0.69	-1.1
3,041,855	+				-1.8
3,041,855	+		Ga0059261_2932	0.69	+0.0
3,041,856	-		Ga0059261_2932	0.69	+0.2
3,041,890	+		Ga0059261_2932	0.71	-0.5
3,041,891	-		Ga0059261_2932	0.71	-1.1
3,041,891	-		Ga0059261_2932	0.71	+1.8
3,041,956	+		Ga0059261_2932	0.73	+0.1
3,041,956	+		Ga0059261_2932	0.73	-1.0
3,041,956	+		Ga0059261_2932	0.73	-0.6
3,041,956	+		Ga0059261_2932	0.73	-0.3
3,041,957	-		Ga0059261_2932	0.73	-0.5
3,041,957	-		Ga0059261_2932	0.73	-0.3
3,041,957	-		Ga0059261_2932	0.73	-1.2
3,041,957	-		Ga0059261_2932	0.73	+0.0
3,042,045	+		Ga0059261_2932	0.76	-0.1
3,042,045	+		Ga0059261_2932	0.76	-0.1
3,042,045	+		Ga0059261_2932	0.76	+0.4
3,042,045	+		Ga0059261_2932	0.76	+0.5
3,042,046	-		Ga0059261_2932	0.76	-0.0
3,042,046	-		Ga0059261_2932	0.76	+1.0
3,042,051	+		Ga0059261_2932	0.77	-1.1
3,042,051	+		Ga0059261_2932	0.77	-0.0
3,042,051	+		Ga0059261_2932	0.77	-0.8
3,042,051	+		Ga0059261_2932	0.77	-1.0
3,042,052	-		Ga0059261_2932	0.77	-0.1
3,042,052	-		Ga0059261_2932	0.77	+0.8
3,042,305	-		Ga0059261_2932	0.86	+1.0
3,042,506	+				+0.2
3,042,506	+				+0.0
3,042,506	+				-0.6
3,042,506	+				-0.1
3,042,506	+				+1.6
3,042,506	+				+1.0
3,042,507	-				-0.9
3,042,692	+				+0.2
3,042,692	+				+0.0
3,042,692	+				-0.6
3,042,693	-				-0.6
3,042,714	+				+0.0
3,042,715	-				+0.5
3,042,761	+				+0.3
3,042,761	+				+0.3
3,042,761	+				+0.6
3,042,762	-				+0.0
3,042,828	+				-0.4
3,042,828	+				+0.2
3,042,828	+				+2.0
3,042,828	+				+0.2
3,042,829	-				+0.1
3,042,829	-				-0.7
3,042,829	-				-0.4
3,042,829	-				+0.1
3,042,922	-		Ga0059261_2933	0.21	+0.8
3,042,922	-		Ga0059261_2933	0.21	-0.2
3,042,942	+		Ga0059261_2933	0.24	+0.6
3,042,942	+		Ga0059261_2933	0.24	-0.7
3,042,942	+		Ga0059261_2933	0.24	+1.2
3,042,943	-		Ga0059261_2933	0.24	+1.5
3,042,943	-		Ga0059261_2933	0.24	+0.3
3,043,095	+		Ga0059261_2933	0.48	+0.4
3,043,095	+		Ga0059261_2933	0.48	-0.1
3,043,095	+		Ga0059261_2933	0.48	+0.4
3,043,095	+		Ga0059261_2933	0.48	+0.8
3,043,096	-		Ga0059261_2933	0.48	+0.3
3,043,096	-		Ga0059261_2933	0.48	+0.8
3,043,168	+		Ga0059261_2933	0.59	-0.2
3,043,168	+		Ga0059261_2933	0.59	-0.2
3,043,168	+		Ga0059261_2933	0.59	-0.7
3,043,168	+		Ga0059261_2933	0.59	+0.7
3,043,168	+		Ga0059261_2933	0.59	-0.3
3,043,168	+		Ga0059261_2933	0.59	-0.0
3,043,169	-		Ga0059261_2933	0.59	+1.0
3,043,509	+		Ga0059261_2934	0.23	-0.2
3,043,509	+		Ga0059261_2934	0.23	-1.2
3,043,509	+		Ga0059261_2934	0.23	+0.4
3,043,510	-		Ga0059261_2934	0.23	+0.3
3,043,510	-		Ga0059261_2934	0.23	+0.0
3,043,510	-		Ga0059261_2934	0.23	-0.8
3,043,574	+		Ga0059261_2934	0.40	-1.0
3,043,575	-		Ga0059261_2934	0.40	+1.0
3,043,575	-		Ga0059261_2934	0.40	-0.5
3,043,575	-		Ga0059261_2934	0.40	-0.1
3,043,575	-		Ga0059261_2934	0.40	+0.2
3,043,575	-		Ga0059261_2934	0.40	-0.2
3,043,756	+		Ga0059261_2934	0.87	+0.4
3,043,756	+		Ga0059261_2934	0.87	-2.5
3,043,756	+		Ga0059261_2934	0.87	+0.3
3,043,756	+				+1.0
3,043,757	-		Ga0059261_2934	0.87	-0.4
3,043,804	+				+0.1
3,043,805	-				+0.5
3,043,842	+				+0.3
3,043,842	+				+0.4
3,043,842	+				+0.6
3,043,843	-				-0.8
3,043,843	-				+0.0
3,043,843	-				+0.4
3,043,843	-				+0.3
3,043,843	-				-1.8
3,043,852	+				+0.5
3,043,852	+				+0.5
3,043,853	-				+0.2
3,043,898	+				+1.4
3,043,899	-				-1.7
3,043,940	-		Ga0059261_2935	0.14	-0.3
3,043,940	-		Ga0059261_2935	0.14	-0.3
3,043,994	+		Ga0059261_2935	0.21	-0.4
3,043,994	+		Ga0059261_2935	0.21	-0.2
3,043,994	+		Ga0059261_2935	0.21	+0.2
3,043,995	-		Ga0059261_2935	0.21	-0.7
3,044,112	+		Ga0059261_2935	0.37	-0.2
3,044,177	+		Ga0059261_2935	0.45	+0.6
3,044,177	+		Ga0059261_2935	0.45	+0.2
3,044,177	+		Ga0059261_2935	0.45	+0.4
3,044,178	-		Ga0059261_2935	0.45	-0.3
3,044,178	-		Ga0059261_2935	0.45	+0.8
3,044,209	+		Ga0059261_2935	0.49	+2.0
3,044,209	+		Ga0059261_2935	0.49	-0.1
3,044,210	-		Ga0059261_2935	0.49	-1.1