Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2886

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,995,147	+				+0.4
2,995,147	+				-1.3
2,995,147	+				+0.6
2,995,147	+				+0.1
2,995,147	+				+0.3
2,995,148	-				+0.2
2,995,344	-		Ga0059261_2885	0.18	-0.5
2,995,344	-		Ga0059261_2885	0.18	-0.9
2,995,344	-		Ga0059261_2885	0.18	+0.2
2,995,344	-		Ga0059261_2885	0.18	-0.0
2,995,400	+		Ga0059261_2885	0.24	+0.5
2,995,724	+		Ga0059261_2885	0.59	-0.9
2,995,724	+		Ga0059261_2885	0.59	+0.3
2,995,724	+		Ga0059261_2885	0.59	+0.2
2,995,724	+		Ga0059261_2885	0.59	-0.1
2,995,856	+		Ga0059261_2885	0.73	-0.6
2,995,913	+		Ga0059261_2885	0.79	-0.8
2,995,913	+				-0.3
2,995,914	-		Ga0059261_2885	0.80	-1.2
2,995,914	-		Ga0059261_2885	0.80	+1.1
2,996,230	+		Ga0059261_2886	0.17	+0.8
2,996,230	+		Ga0059261_2886	0.17	+0.2
2,996,230	+		Ga0059261_2886	0.17	+0.3
2,996,230	+		Ga0059261_2886	0.17	+0.5
2,996,231	-		Ga0059261_2886	0.17	+0.1
2,996,231	-				+3.1
2,996,809	+				-0.9
2,996,810	+				-0.1
2,996,810	+				-0.4
2,996,810	+				+0.1
2,996,810	+				-0.4
2,996,810	+				+0.1
2,996,810	+				-1.0
2,996,810	+				+0.4
2,996,810	+				+0.7
2,996,811	-				-0.4
2,996,811	-				+0.2
2,996,811	-				-0.9
2,996,811	-				+0.2
2,996,811	-				-0.3
2,996,811	-				-0.9
2,996,811	-				+1.8
2,996,811	-				-0.3
2,996,811	-				-0.8
2,996,811	-				-0.2
2,996,811	-				+0.6
2,996,811	-				-0.3
2,996,811	-				-0.6
2,996,811	-				+0.3
2,996,811	-				-0.3
2,996,812	+				-0.7
2,996,812	+				-0.3
2,996,812	+				+0.5
2,996,812	+				-0.7
2,996,812	+				-0.3
2,996,812	+				-0.9
2,996,813	-				-1.5
2,996,813	-				-0.5
2,996,813	-				-0.5
2,996,813	-				+1.0
2,996,813	-				-1.5
2,996,813	-				-0.0
2,996,841	+				-1.3
2,996,841	+				+0.3
2,996,841	+				-1.3
2,996,842	-				+0.1
2,996,842	-				+0.3
2,996,842	-				-0.1
2,996,992	+				-0.1
2,996,992	+				+0.1
2,996,992	+				-0.8
2,996,992	+				-0.1
2,996,992	+				-1.1
2,997,040	+				-0.4
2,997,134	+		Ga0059261_2887	0.15	-0.5
2,997,135	-		Ga0059261_2887	0.15	-0.7
2,997,135	-		Ga0059261_2887	0.15	+0.2
2,997,135	-		Ga0059261_2887	0.15	+0.3
2,997,278	+		Ga0059261_2887	0.33	+0.1
2,997,278	+		Ga0059261_2887	0.33	+1.1
2,997,278	+		Ga0059261_2887	0.33	+1.0
2,997,278	+		Ga0059261_2887	0.33	+0.1
2,997,278	+		Ga0059261_2887	0.33	+0.4
2,997,279	-		Ga0059261_2887	0.33	+0.9
2,997,279	-		Ga0059261_2887	0.33	-0.7
2,997,279	-		Ga0059261_2887	0.33	-0.6
2,997,280	+		Ga0059261_2887	0.33	-0.6
2,997,281	-		Ga0059261_2887	0.33	-0.2
2,997,281	-		Ga0059261_2887	0.33	-0.2
2,997,281	-		Ga0059261_2887	0.33	-0.4
2,997,281	-		Ga0059261_2887	0.33	-0.1
2,997,281	-		Ga0059261_2887	0.33	-0.3
2,997,281	-		Ga0059261_2887	0.33	+0.1
2,997,283	+		Ga0059261_2887	0.33	-0.4
2,997,407	+		Ga0059261_2887	0.49	-0.8
2,997,407	+		Ga0059261_2887	0.49	+0.2
2,997,407	+		Ga0059261_2887	0.49	+0.2
2,997,408	-		Ga0059261_2887	0.49	-0.3
2,997,408	-		Ga0059261_2887	0.49	-0.2
2,997,408	-		Ga0059261_2887	0.49	-0.1
2,997,431	-		Ga0059261_2887	0.52	-0.5
2,997,802	-				+0.3
2,997,822	+				+0.4