Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2684

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,792,813	+				+0.4
2,792,813	+				-1.5
2,792,814	-				+1.7
2,792,883	+				-1.2
2,792,883	+				-0.2
2,792,884	-				+0.5
2,792,884	-				+0.5
2,792,884	-				+0.3
2,792,884	-				-0.5
2,792,884	-				-1.1
2,792,902	+				-1.3
2,792,902	+				+0.2
2,792,902	+				-0.1
2,792,902	+				-0.3
2,792,903	-				+0.1
2,792,903	-				+0.9
2,792,906	+				+1.1
2,792,963	+		Ga0059261_2682	0.15	-0.1
2,792,963	+		Ga0059261_2682	0.15	+1.1
2,792,963	+		Ga0059261_2682	0.15	-0.2
2,792,963	+		Ga0059261_2682	0.15	-0.9
2,792,963	+		Ga0059261_2682	0.15	+1.1
2,792,963	+		Ga0059261_2682	0.15	+0.9
2,792,963	+		Ga0059261_2682	0.15	+0.2
2,792,964	-		Ga0059261_2682	0.16	+0.9
2,792,964	-		Ga0059261_2682	0.16	+0.7
2,792,964	-		Ga0059261_2682	0.16	+0.1
2,792,964	-		Ga0059261_2682	0.16	-1.9
2,792,964	-		Ga0059261_2682	0.16	+0.1
2,792,964	-		Ga0059261_2682	0.16	-0.6
2,792,964	-		Ga0059261_2682	0.16	-0.5
2,792,964	-		Ga0059261_2682	0.16	-0.1
2,792,964	-		Ga0059261_2682	0.16	+0.1
2,792,964	-		Ga0059261_2682	0.16	+0.3
2,792,964	-		Ga0059261_2682	0.16	-0.1
2,793,014	+		Ga0059261_2682	0.29	+0.2
2,793,014	+		Ga0059261_2682	0.29	-0.3
2,793,015	-		Ga0059261_2682	0.29	+0.3
2,793,111	-		Ga0059261_2682	0.54	-0.4
2,793,234	-		Ga0059261_2682	0.87	+0.5
2,793,276	+				-0.1
2,793,276	+				-0.1
2,793,276	+				-0.2
2,793,276	+				+0.7
2,793,277	-				-0.1
2,793,277	-				-0.5
2,793,277	-				-0.3
2,793,277	-				+1.0
2,793,277	-				+0.2
2,793,303	+				-0.4
2,793,303	+				+0.3
2,793,304	-				-0.6
2,793,492	+		Ga0059261_2683	0.67	+0.3
2,793,492	+		Ga0059261_2683	0.67	+0.5
2,793,492	+		Ga0059261_2683	0.67	-0.5
2,793,492	+		Ga0059261_2683	0.67	-0.4
2,793,492	+		Ga0059261_2683	0.67	+0.4
2,793,493	-		Ga0059261_2683	0.67	-0.2
2,793,493	-		Ga0059261_2683	0.67	+0.1
2,793,493	-		Ga0059261_2683	0.67	-0.5
2,793,493	-		Ga0059261_2683	0.67	-0.4
2,793,493	-		Ga0059261_2683	0.67	-0.9
2,793,493	-		Ga0059261_2683	0.67	+0.5
2,793,999	+		Ga0059261_2684	0.65	-0.9
2,793,999	+		Ga0059261_2684	0.65	-0.3
2,794,000	-		Ga0059261_2684	0.65	+1.9
2,794,116	-		Ga0059261_2684	0.83	+1.0
2,794,219	+				-0.1
2,794,219	+				-0.1
2,794,219	+				-0.2
2,794,219	+				-0.2
2,794,219	+				-0.7
2,794,219	+				-0.7
2,794,219	+				+0.1
2,794,219	+				+0.4
2,794,219	+				-0.1
2,794,219	+				-0.4
2,794,219	+				-0.5
2,794,219	+				+0.4
2,794,219	+				-0.2
2,794,219	+				-1.1
2,794,219	+				+0.3
2,794,219	+				+1.1
2,794,219	+				-0.6
2,794,219	+				+0.4
2,794,220	-				-0.2
2,794,220	-				-0.2
2,794,220	-				+0.1
2,794,220	-				-0.1
2,794,220	-				+0.1
2,794,220	-				-0.1
2,794,220	-				-0.5
2,794,220	-				-1.8
2,794,220	-				-0.4
2,794,220	-				-0.8
2,794,220	-				+1.1
2,794,220	-				-1.1
2,794,220	-				-0.1
2,794,220	-				-0.9
2,794,294	+		Ga0059261_2685	0.16	-0.3
2,794,294	+		Ga0059261_2685	0.16	+0.0
2,794,294	+		Ga0059261_2685	0.16	-1.1
2,794,294	+		Ga0059261_2685	0.16	+0.5
2,794,295	-		Ga0059261_2685	0.16	+0.7
2,794,295	-		Ga0059261_2685	0.16	-0.3
2,794,295	-		Ga0059261_2685	0.16	-0.7
2,794,295	-				+0.7
2,794,295	-		Ga0059261_2685	0.16	-0.5
2,794,295	-		Ga0059261_2685	0.16	-0.4
2,794,295	-		Ga0059261_2685	0.16	-0.1
2,794,295	-		Ga0059261_2685	0.16	+0.4
2,794,295	-		Ga0059261_2685	0.16	+0.1
2,794,402	+		Ga0059261_2685	0.39	+0.1
2,794,402	+		Ga0059261_2685	0.39	-0.6
2,794,402	+		Ga0059261_2685	0.39	-0.5
2,794,402	+		Ga0059261_2685	0.39	+0.3
2,794,403	-		Ga0059261_2685	0.39	+1.6
2,794,403	-		Ga0059261_2685	0.39	+0.3
2,794,453	+		Ga0059261_2685	0.50	+1.1
2,794,505	+		Ga0059261_2685	0.62	-0.3
2,794,505	+		Ga0059261_2685	0.62	-1.0
2,794,506	-		Ga0059261_2685	0.62	+0.3
2,794,506	-		Ga0059261_2685	0.62	-0.9
2,794,822	+				-0.1
2,794,822	+				-0.7
2,794,896	-				+0.6