Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2361

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,461,768	+				-0.4
2,461,768	+				+0.0
2,461,768	+				-1.0
2,461,768	+				-1.4
2,461,768	+				-0.1
2,461,768	+				-0.6
2,461,768	+				+0.5
2,461,768	+				-0.4
2,461,769	-				-0.4
2,461,769	-				-0.1
2,461,769	-				-1.1
2,461,769	-				+0.0
2,461,769	-				-0.4
2,461,769	-				-0.2
2,461,769	-				+0.1
2,461,769	-				+1.2
2,461,970	+		Ga0059261_2360	0.24	+0.0
2,461,971	-		Ga0059261_2360	0.24	+0.5
2,461,971	-		Ga0059261_2360	0.24	-0.7
2,462,015	+		Ga0059261_2360	0.30	-0.7
2,462,015	+		Ga0059261_2360	0.30	+0.2
2,462,016	-		Ga0059261_2360	0.31	-0.0
2,462,016	-		Ga0059261_2360	0.31	-0.8
2,462,016	-		Ga0059261_2360	0.31	+0.1
2,462,098	+		Ga0059261_2360	0.42	-1.0
2,462,098	+		Ga0059261_2360	0.42	+0.5
2,462,098	+		Ga0059261_2360	0.42	-1.0
2,462,098	+		Ga0059261_2360	0.42	+1.0
2,462,098	+		Ga0059261_2360	0.42	+0.4
2,462,098	+		Ga0059261_2360	0.42	+0.5
2,462,098	+		Ga0059261_2360	0.42	+0.2
2,462,098	+		Ga0059261_2360	0.42	+0.0
2,462,099	-		Ga0059261_2360	0.42	+0.5
2,462,099	-		Ga0059261_2360	0.42	-0.2
2,462,099	-		Ga0059261_2360	0.42	-0.6
2,462,099	-		Ga0059261_2360	0.42	-0.5
2,462,099	-				+2.2
2,462,099	-		Ga0059261_2360	0.42	-0.9
2,462,099	-		Ga0059261_2360	0.42	-0.0
2,462,099	-		Ga0059261_2360	0.42	-0.1
2,462,099	-		Ga0059261_2360	0.42	-0.4
2,462,099	-		Ga0059261_2360	0.42	-1.1
2,462,100	+		Ga0059261_2360	0.42	-0.9
2,462,100	+		Ga0059261_2360	0.42	+0.1
2,462,101	-		Ga0059261_2360	0.42	+0.0
2,462,101	-		Ga0059261_2360	0.42	+0.8
2,462,101	-		Ga0059261_2360	0.42	+0.5
2,462,101	-		Ga0059261_2360	0.42	-1.4
2,462,205	+		Ga0059261_2360	0.56	-0.9
2,462,205	+		Ga0059261_2360	0.56	-0.3
2,462,205	+		Ga0059261_2360	0.56	-0.0
2,462,205	+		Ga0059261_2360	0.56	+1.2
2,462,205	+		Ga0059261_2360	0.56	+0.5
2,462,205	+		Ga0059261_2360	0.56	+0.7
2,462,205	+		Ga0059261_2360	0.56	-0.2
2,462,205	+		Ga0059261_2360	0.56	-0.1
2,462,205	+		Ga0059261_2360	0.56	+1.2
2,462,205	+		Ga0059261_2360	0.56	+0.4
2,462,205	+		Ga0059261_2360	0.56	-0.0
2,462,205	+		Ga0059261_2360	0.56	-0.4
2,462,206	-		Ga0059261_2360	0.57	-0.9
2,462,206	-		Ga0059261_2360	0.57	-0.5
2,462,206	-		Ga0059261_2360	0.57	-0.6
2,462,206	-		Ga0059261_2360	0.57	-1.4
2,462,206	-		Ga0059261_2360	0.57	+0.5
2,462,206	-		Ga0059261_2360	0.57	-0.9
2,462,206	-		Ga0059261_2360	0.57	+1.2
2,462,206	-		Ga0059261_2360	0.57	-1.4
2,462,206	-		Ga0059261_2360	0.57	-0.2
2,462,206	-		Ga0059261_2360	0.57	-1.1
2,462,206	-		Ga0059261_2360	0.57	+1.0
2,462,206	-		Ga0059261_2360	0.57	+0.1
2,462,324	+		Ga0059261_2360	0.73	+0.2
2,462,325	-		Ga0059261_2360	0.73	-0.2
2,462,325	-		Ga0059261_2360	0.73	+0.1
2,462,380	+		Ga0059261_2360	0.80	+0.1
2,462,380	+		Ga0059261_2360	0.80	-0.4
2,462,381	-		Ga0059261_2360	0.80	-1.5
2,462,381	-		Ga0059261_2360	0.80	-1.8
2,462,429	+		Ga0059261_2360	0.87	-0.4
2,462,430	-		Ga0059261_2360	0.87	+0.4
2,462,453	+				+0.4
2,462,453	+				+0.3
2,462,454	-				+0.3
2,462,454	-				+0.3
2,462,521	+				+0.1
2,462,521	+				+0.2
2,462,521	+				-0.7
2,462,521	+				+0.0
2,462,521	+				-0.1
2,462,522	-				+0.4
2,462,522	-				+0.5
2,462,546	+				-0.2
2,462,546	+				-0.3
2,462,546	+				+2.2
2,462,546	+				+0.2
2,462,546	+				-0.4
2,462,546	+				-0.3
2,462,546	+				-0.2
2,462,546	+				+0.2
2,462,546	+				+0.2
2,462,546	+				-0.2
2,462,547	-				+0.3
2,462,547	-				-0.6
2,462,547	-				-0.5
2,462,547	-				-0.8
2,462,547	-				-1.1
2,462,547	-				+0.1
2,462,547	-				-0.0
2,462,547	-				+0.4
2,462,547	-				-0.8
2,462,547	-				-0.5
2,462,547	-				-0.7
2,462,552	+				-0.8
2,462,552	+				-0.9
2,462,553	-				+0.4
2,462,553	-				+0.3
2,462,553	-				+0.1
2,462,660	+		Ga0059261_2361	0.38	-0.5
2,462,660	+		Ga0059261_2361	0.38	+0.2
2,462,660	+		Ga0059261_2361	0.38	+1.2
2,462,660	+		Ga0059261_2361	0.38	+1.6
2,462,660	+		Ga0059261_2361	0.38	+0.2
2,462,661	-				+0.2
2,462,661	-		Ga0059261_2361	0.38	+0.7
2,462,661	-		Ga0059261_2361	0.38	-0.2
2,462,661	-		Ga0059261_2361	0.38	+0.4
2,462,785	+		Ga0059261_2361	0.74	+0.4
2,462,785	+		Ga0059261_2361	0.74	-0.0
2,462,785	+		Ga0059261_2361	0.74	+0.3
2,462,786	-		Ga0059261_2361	0.74	-0.1
2,462,786	-		Ga0059261_2361	0.74	+0.2
2,462,872	+				+1.7
2,462,872	+				-1.1
2,462,873	-				-0.1
2,462,967	-				+0.9
2,462,967	-				-0.6
2,463,032	-		Ga0059261_2362	0.16	+0.2
2,463,109	+		Ga0059261_2362	0.24	-0.2
2,463,109	+		Ga0059261_2362	0.24	+0.9
2,463,109	+		Ga0059261_2362	0.24	-0.1
2,463,110	-		Ga0059261_2362	0.24	-0.5
2,463,110	-		Ga0059261_2362	0.24	+0.1
2,463,110	-		Ga0059261_2362	0.24	-0.1
2,463,110	-		Ga0059261_2362	0.24	+0.7
2,463,110	-		Ga0059261_2362	0.24	-0.1
2,463,184	+		Ga0059261_2362	0.31	+0.3
2,463,184	+		Ga0059261_2362	0.31	+0.0
2,463,184	+		Ga0059261_2362	0.31	-0.3
2,463,185	-		Ga0059261_2362	0.32	-1.9
2,463,185	-		Ga0059261_2362	0.32	+0.4
2,463,185	-		Ga0059261_2362	0.32	-0.3
2,463,185	-		Ga0059261_2362	0.32	-0.4
2,463,224	-		Ga0059261_2362	0.35	+0.1
2,463,355	+		Ga0059261_2362	0.49	+0.4
2,463,363	-		Ga0059261_2362	0.49	+0.1
2,463,685	+		Ga0059261_2362	0.82	+0.1
2,463,685	+		Ga0059261_2362	0.82	+0.9
2,463,685	+		Ga0059261_2362	0.82	+0.3
2,463,685	+		Ga0059261_2362	0.82	-0.8
2,463,685	+		Ga0059261_2362	0.82	+0.1
2,463,685	+		Ga0059261_2362	0.82	+0.1
2,463,685	+		Ga0059261_2362	0.82	-0.6
2,463,685	+		Ga0059261_2362	0.82	-1.1
2,463,685	+		Ga0059261_2362	0.82	-0.9
2,463,685	+		Ga0059261_2362	0.82	-0.4
2,463,686	-		Ga0059261_2362	0.82	-0.3
2,463,686	-		Ga0059261_2362	0.82	+0.3
2,463,686	-		Ga0059261_2362	0.82	-0.1
2,463,686	-		Ga0059261_2362	0.82	+0.0
2,463,686	-		Ga0059261_2362	0.82	-0.2
2,463,686	-		Ga0059261_2362	0.82	+0.2
2,463,686	-		Ga0059261_2362	0.82	-0.7
2,463,686	-		Ga0059261_2362	0.82	-0.2
2,463,686	-		Ga0059261_2362	0.82	+0.2
2,463,686	-		Ga0059261_2362	0.82	-1.6
2,463,686	-		Ga0059261_2362	0.82	-0.3
2,463,726	-		Ga0059261_2362	0.86	+0.1
2,463,741	+		Ga0059261_2362	0.87	-3.0
2,463,741	+				-0.8
2,463,741	+		Ga0059261_2362	0.87	+0.6
2,463,741	+		Ga0059261_2362	0.87	-0.7
2,463,741	+		Ga0059261_2362	0.87	+0.2
2,463,741	+		Ga0059261_2362	0.87	+0.3
2,463,742	-		Ga0059261_2362	0.87	-0.7
2,463,742	-		Ga0059261_2362	0.87	-1.5