Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1991

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,094,027	+		Ga0059261_1989	0.76	-0.1
2,094,027	+		Ga0059261_1989	0.76	-1.8
2,094,028	-		Ga0059261_1989	0.77	+0.1
2,094,063	+		Ga0059261_1989	0.79	+0.7
2,094,063	+		Ga0059261_1989	0.79	+0.0
2,094,063	+				+1.6
2,094,063	+		Ga0059261_1989	0.79	+0.3
2,094,063	+		Ga0059261_1989	0.79	+0.6
2,094,064	-		Ga0059261_1989	0.79	+0.2
2,094,064	-		Ga0059261_1989	0.79	-0.1
2,094,064	-		Ga0059261_1989	0.79	-0.2
2,094,064	-		Ga0059261_1989	0.79	-0.5
2,094,064	-		Ga0059261_1989	0.79	+0.9
2,094,064	-		Ga0059261_1989	0.79	+0.0
2,094,064	-		Ga0059261_1989	0.79	+0.1
2,094,064	-		Ga0059261_1989	0.79	-0.4
2,094,065	+		Ga0059261_1989	0.80	+0.1
2,094,065	+		Ga0059261_1989	0.80	+0.9
2,094,066	-		Ga0059261_1989	0.80	-0.4
2,094,066	-		Ga0059261_1989	0.80	-0.2
2,094,066	-		Ga0059261_1989	0.80	-0.7
2,094,066	-		Ga0059261_1989	0.80	-0.2
2,094,066	-		Ga0059261_1989	0.80	-0.3
2,094,066	-		Ga0059261_1989	0.80	-2.6
2,094,066	-		Ga0059261_1989	0.80	-0.4
2,094,066	-		Ga0059261_1989	0.80	-0.4
2,094,116	-		Ga0059261_1989	0.84	+0.5
2,094,231	+				-0.1
2,094,231	+				-0.2
2,094,231	+				-2.1
2,094,231	+				-0.4
2,094,231	+				-0.6
2,094,232	-				-0.6
2,094,232	-				-0.2
2,094,232	-				-0.1
2,094,282	+				+0.3
2,094,282	+				-0.9
2,094,282	+				+0.3
2,094,282	+				+0.2
2,094,282	+				-0.5
2,094,282	+				+0.1
2,094,282	+				-0.6
2,094,282	+				-0.9
2,094,282	+				-0.1
2,094,282	+				+0.7
2,094,282	+				+0.0
2,094,283	-				-0.0
2,094,283	-				-0.3
2,094,283	-				+0.5
2,094,283	-				-0.2
2,094,283	-				-0.8
2,094,283	-				+0.4
2,094,283	-				-0.2
2,094,283	-				+0.9
2,094,300	+				+0.6
2,094,300	+				-0.5
2,094,300	+				+0.2
2,094,301	-				-0.1
2,094,301	-				-0.6
2,094,350	+				-0.1
2,094,350	+				+0.1
2,094,350	+				+0.1
2,094,350	+				+0.3
2,094,350	+				+0.3
2,094,351	-				-0.3
2,094,351	-				-0.4
2,094,351	-				-0.3
2,094,351	-				+0.9
2,094,351	-				-1.2
2,094,351	-				+0.2
2,094,351	-				+1.5
2,094,351	-				-0.3
2,094,371	+				-0.1
2,094,371	+				-1.0
2,094,371	+				+0.0
2,094,372	-				+0.8
2,094,372	-				+0.6
2,094,372	-				-0.1
2,094,372	-				+0.2
2,094,389	+		Ga0059261_1990	0.12	+0.2
2,094,389	+		Ga0059261_1990	0.12	-0.0
2,094,389	+		Ga0059261_1990	0.12	-0.2
2,094,389	+		Ga0059261_1990	0.12	+0.6
2,094,389	+		Ga0059261_1990	0.12	-0.1
2,094,389	+		Ga0059261_1990	0.12	-0.1
2,094,390	-		Ga0059261_1990	0.12	-1.0
2,094,390	-		Ga0059261_1990	0.12	-0.8
2,094,390	-		Ga0059261_1990	0.12	-0.0
2,094,390	-		Ga0059261_1990	0.12	-0.1
2,094,392	+		Ga0059261_1990	0.12	+0.3
2,094,392	+		Ga0059261_1990	0.12	-0.1
2,094,392	+		Ga0059261_1990	0.12	-0.3
2,094,392	+		Ga0059261_1990	0.12	-0.2
2,094,392	+		Ga0059261_1990	0.12	-0.4
2,094,393	-		Ga0059261_1990	0.12	+1.2
2,094,393	-				-1.1
2,094,521	+		Ga0059261_1990	0.32	+0.0
2,094,521	+		Ga0059261_1990	0.32	-0.4
2,094,636	-		Ga0059261_1990	0.50	-0.3
2,094,680	+		Ga0059261_1990	0.56	-1.1
2,094,680	+		Ga0059261_1990	0.56	+0.1
2,094,680	+		Ga0059261_1990	0.56	+0.2
2,094,680	+		Ga0059261_1990	0.56	-0.5
2,094,681	-		Ga0059261_1990	0.57	+0.5
2,094,681	-		Ga0059261_1990	0.57	+0.1
2,094,681	-		Ga0059261_1990	0.57	+0.5
2,094,681	-		Ga0059261_1990	0.57	+2.5
2,094,681	-		Ga0059261_1990	0.57	+0.6
2,094,681	-		Ga0059261_1990	0.57	-0.8
2,094,681	-		Ga0059261_1990	0.57	+0.1
2,094,681	-		Ga0059261_1990	0.57	+0.2
2,094,681	-		Ga0059261_1990	0.57	+0.4
2,094,929	+				+0.1
2,094,960	-				+1.2
2,095,052	+		Ga0059261_1991	0.16	+0.4
2,095,053	-		Ga0059261_1991	0.16	+0.7
2,095,053	-		Ga0059261_1991	0.16	-0.1
2,095,200	-		Ga0059261_1991	0.42	-0.0
2,095,200	-		Ga0059261_1991	0.42	-0.1
2,095,747	-		Ga0059261_1992	0.26	-0.4
2,095,876	+		Ga0059261_1992	0.43	-1.6
2,095,876	+		Ga0059261_1992	0.43	-0.3
2,095,877	-		Ga0059261_1992	0.43	+0.1
2,095,900	+		Ga0059261_1992	0.46	-0.0
2,095,900	+		Ga0059261_1992	0.46	+0.4
2,095,900	+		Ga0059261_1992	0.46	-0.3
2,095,900	+		Ga0059261_1992	0.46	+0.2
2,095,901	-		Ga0059261_1992	0.46	+0.3
2,095,901	-		Ga0059261_1992	0.46	-0.5
2,095,954	+		Ga0059261_1992	0.53	+1.5
2,095,954	+		Ga0059261_1992	0.53	+0.2
2,095,954	+		Ga0059261_1992	0.53	+1.9
2,095,954	+		Ga0059261_1992	0.53	+0.3
2,095,978	+		Ga0059261_1992	0.56	-0.1
2,095,978	+		Ga0059261_1992	0.56	-0.1
2,096,148	+		Ga0059261_1992	0.78	-0.1
2,096,148	+		Ga0059261_1992	0.78	-0.3
2,096,148	+		Ga0059261_1992	0.78	-0.1
2,096,149	-		Ga0059261_1992	0.78	-0.6
2,096,149	-		Ga0059261_1992	0.78	+0.7
2,096,149	-		Ga0059261_1992	0.78	-0.3
2,096,149	-		Ga0059261_1992	0.78	-0.6
2,096,222	+		Ga0059261_1992	0.88	-0.5
2,096,330	+				+0.1
2,096,331	-				+0.6
2,096,385	+				+0.5
2,096,409	+				+0.8
2,096,409	+				-0.5
2,096,410	-				+2.8