Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1799

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,908,472	+		Ga0059261_1797	0.83	-0.2
1,908,472	+		Ga0059261_1797	0.83	+0.8
1,908,472	+		Ga0059261_1797	0.83	+0.1
1,908,472	+		Ga0059261_1797	0.83	+0.3
1,908,472	+		Ga0059261_1797	0.83	+0.0
1,908,472	+		Ga0059261_1797	0.83	+1.3
1,908,473	-		Ga0059261_1797	0.83	+0.0
1,908,473	-		Ga0059261_1797	0.83	-1.5
1,908,473	-		Ga0059261_1797	0.83	-0.3
1,908,492	+		Ga0059261_1797	0.84	-1.1
1,908,492	+		Ga0059261_1797	0.84	-0.7
1,908,493	-		Ga0059261_1797	0.84	+0.5
1,908,493	-		Ga0059261_1797	0.84	+0.2
1,908,493	-		Ga0059261_1797	0.84	+0.6
1,908,493	-		Ga0059261_1797	0.84	-0.2
1,908,728	+				-1.5
1,908,729	-				-0.5
1,908,729	-				+0.7
1,908,729	-				+0.5
1,908,729	-				-0.1
1,908,867	+		Ga0059261_1798	0.23	-0.5
1,908,867	+		Ga0059261_1798	0.23	-0.8
1,908,867	+		Ga0059261_1798	0.23	-0.2
1,908,867	+		Ga0059261_1798	0.23	-0.2
1,908,867	+		Ga0059261_1798	0.23	+0.5
1,908,867	+		Ga0059261_1798	0.23	-0.3
1,908,867	+		Ga0059261_1798	0.23	+0.2
1,908,867	+		Ga0059261_1798	0.23	-1.0
1,908,867	+		Ga0059261_1798	0.23	-0.3
1,908,867	+		Ga0059261_1798	0.23	+0.3
1,908,867	+		Ga0059261_1798	0.23	-1.2
1,908,867	+		Ga0059261_1798	0.23	+1.1
1,908,867	+		Ga0059261_1798	0.23	-0.1
1,908,867	+		Ga0059261_1798	0.23	+0.3
1,908,867	+		Ga0059261_1798	0.23	+0.7
1,908,867	+		Ga0059261_1798	0.23	+0.0
1,908,867	+		Ga0059261_1798	0.23	+0.4
1,908,867	+		Ga0059261_1798	0.23	-0.0
1,908,868	-		Ga0059261_1798	0.23	+0.1
1,908,868	-		Ga0059261_1798	0.23	-0.0
1,908,868	-		Ga0059261_1798	0.23	+0.2
1,908,868	-		Ga0059261_1798	0.23	+0.6
1,908,868	-		Ga0059261_1798	0.23	-0.1
1,908,868	-		Ga0059261_1798	0.23	+0.3
1,908,868	-		Ga0059261_1798	0.23	+0.1
1,908,868	-		Ga0059261_1798	0.23	+0.3
1,908,868	-		Ga0059261_1798	0.23	+0.1
1,908,868	-		Ga0059261_1798	0.23	-0.2
1,908,868	-				+0.1
1,908,868	-		Ga0059261_1798	0.23	+0.6
1,908,868	-		Ga0059261_1798	0.23	-0.6
1,908,868	-		Ga0059261_1798	0.23	+0.9
1,908,868	-		Ga0059261_1798	0.23	+0.3
1,908,869	+		Ga0059261_1798	0.23	-0.1
1,908,869	+		Ga0059261_1798	0.23	-0.0
1,908,869	+		Ga0059261_1798	0.23	-0.6
1,908,869	+		Ga0059261_1798	0.23	-0.5
1,908,870	-		Ga0059261_1798	0.23	+0.2
1,908,870	-		Ga0059261_1798	0.23	-0.9
1,908,870	-		Ga0059261_1798	0.23	+0.1
1,908,870	-		Ga0059261_1798	0.23	-0.9
1,908,870	-		Ga0059261_1798	0.23	+0.0
1,909,207	-		Ga0059261_1798	0.76	-0.3
1,909,207	-		Ga0059261_1798	0.76	-0.1
1,909,207	-		Ga0059261_1798	0.76	+0.2
1,909,450	+		Ga0059261_1799	0.17	+1.1
1,909,451	-		Ga0059261_1799	0.17	+0.3
1,909,704	-		Ga0059261_1799	0.60	-0.1
1,909,884	+				-0.2
1,909,884	+				+0.4
1,909,884	+				+0.4
1,909,884	+				-0.4
1,909,884	+				-0.6
1,909,885	-				+0.1
1,909,885	-				-1.1
1,909,885	-				-0.1
1,909,903	+				+1.0
1,909,974	+				-0.5
1,909,974	+				-0.6
1,909,974	+				-0.1
1,909,974	+				-0.6
1,909,974	+				-0.4
1,909,974	+				-0.1
1,909,974	+				+0.1
1,909,974	+				-0.2
1,909,975	-				+0.8
1,909,975	-				+0.6
1,909,975	-				-0.9
1,910,304	+				-0.5
1,910,304	+				-2.6
1,910,304	+				-0.6
1,910,305	-				-0.3
1,910,305	-				-0.5
1,910,305	-				+1.4
1,910,305	-				+0.4
1,910,313	+				-0.5
1,910,313	+				+0.8
1,910,313	+				-0.2
1,910,313	+				-0.1
1,910,313	+				+1.3
1,910,313	+				+0.2
1,910,313	+				-0.3
1,910,313	+				+0.4
1,910,313	+				-0.1
1,910,313	+				-1.1
1,910,313	+				-0.1
1,910,313	+				+1.1
1,910,313	+				-0.1
1,910,313	+				+0.3
1,910,313	+				-0.6
1,910,313	+				+0.1
1,910,313	+				-0.6
1,910,313	+				+0.1
1,910,314	-				-1.4
1,910,314	-				-0.1
1,910,314	-				+0.3
1,910,314	-				-0.5
1,910,314	-				+0.1
1,910,314	-				-0.7
1,910,314	-				-0.5
1,910,314	-				-0.4
1,910,314	-				+0.4
1,910,314	-				-0.5
1,910,314	-				+0.5
1,910,314	-				+0.0
1,910,314	-				+0.8
1,910,314	-				-0.2
1,910,314	-				-0.5
1,910,314	-				+0.2
1,910,314	-				+3.9
1,910,314	-				-0.3
1,910,314	-				+0.1
1,910,314	-				-1.0
1,910,314	-				-0.5
1,910,314	-				+0.5
1,910,314	-				-0.6
1,910,314	-				-0.2
1,910,314	-				+0.3
1,910,314	-				-1.1
1,910,314	-				-1.4
1,910,314	-				-0.4
1,910,508	+		Ga0059261_1800	0.13	+0.1
1,910,508	+		Ga0059261_1800	0.13	-1.1
1,910,508	+		Ga0059261_1800	0.13	+0.0
1,910,508	+		Ga0059261_1800	0.13	+0.8
1,910,508	+		Ga0059261_1800	0.13	-0.3
1,910,508	+		Ga0059261_1800	0.13	+0.4
1,910,508	+		Ga0059261_1800	0.13	+1.7
1,910,508	+		Ga0059261_1800	0.13	+0.2
1,910,509	-		Ga0059261_1800	0.13	+0.2
1,910,509	-		Ga0059261_1800	0.13	-1.5
1,910,509	-		Ga0059261_1800	0.13	+0.0
1,910,509	-		Ga0059261_1800	0.13	+0.2
1,910,509	-		Ga0059261_1800	0.13	-0.1
1,910,509	-		Ga0059261_1800	0.13	+0.6
1,910,541	+		Ga0059261_1800	0.14	-1.0
1,910,541	+		Ga0059261_1800	0.14	-0.2
1,910,541	+		Ga0059261_1800	0.14	-0.6
1,910,541	+		Ga0059261_1800	0.14	+0.1
1,910,541	+		Ga0059261_1800	0.14	-0.8
1,910,541	+		Ga0059261_1800	0.14	+1.1
1,910,542	-		Ga0059261_1800	0.14	-0.9
1,910,542	-		Ga0059261_1800	0.14	-0.3
1,910,542	-		Ga0059261_1800	0.14	+0.0
1,910,542	-		Ga0059261_1800	0.14	-1.7
1,910,542	-		Ga0059261_1800	0.14	-0.2
1,910,542	-		Ga0059261_1800	0.14	+0.4
1,910,580	+		Ga0059261_1800	0.15	+0.7
1,910,637	+		Ga0059261_1800	0.16	-0.5
1,910,637	+		Ga0059261_1800	0.16	-0.1
1,910,637	+		Ga0059261_1800	0.16	-0.3
1,910,638	-		Ga0059261_1800	0.16	+0.4
1,910,696	+		Ga0059261_1800	0.17	+0.0
1,910,696	+		Ga0059261_1800	0.17	+0.4
1,910,696	+		Ga0059261_1800	0.17	+0.2
1,910,697	-		Ga0059261_1800	0.17	-0.3
1,910,697	-		Ga0059261_1800	0.17	+0.6
1,910,697	-		Ga0059261_1800	0.17	+0.1