Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1762

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,867,695	+				+0.8
1,867,695	+				+0.1
1,867,695	+				+0.6
1,867,695	+				-0.9
1,867,696	-				-0.3
1,867,696	-				-0.5
1,867,696	-				+0.6
1,867,696	-				-0.2
1,867,696	-				+0.1
1,867,696	-				-0.8
1,867,696	-				+0.8
1,867,696	-				-0.1
1,867,700	-				+0.6
1,867,700	-				-0.2
1,867,700	-				+0.3
1,867,700	-				-0.0
1,867,736	+				-0.0
1,867,736	+				+0.6
1,867,770	+				+0.4
1,867,770	+				-0.5
1,867,771	-				-0.6
1,867,771	-				-0.7
1,867,771	-				-0.4
1,867,951	+		Ga0059261_1760	0.33	-0.3
1,867,951	+		Ga0059261_1760	0.33	-0.9
1,867,951	+		Ga0059261_1760	0.33	-0.5
1,867,951	+		Ga0059261_1760	0.33	+2.4
1,867,951	+				+0.1
1,867,951	+		Ga0059261_1760	0.33	+0.5
1,867,952	-		Ga0059261_1760	0.34	-0.7
1,867,952	-		Ga0059261_1760	0.34	+0.8
1,867,952	-		Ga0059261_1760	0.34	-0.6
1,867,952	-		Ga0059261_1760	0.34	-0.2
1,868,001	-				-0.5
1,868,002	+		Ga0059261_1760	0.44	+0.7
1,868,002	+		Ga0059261_1760	0.44	+0.9
1,868,002	+		Ga0059261_1760	0.44	-0.7
1,868,002	+		Ga0059261_1760	0.44	-1.1
1,868,002	+		Ga0059261_1760	0.44	-0.1
1,868,002	+		Ga0059261_1760	0.44	-0.1
1,868,002	+		Ga0059261_1760	0.44	+0.0
1,868,002	+		Ga0059261_1760	0.44	-2.1
1,868,002	+		Ga0059261_1760	0.44	-0.3
1,868,002	+		Ga0059261_1760	0.44	-0.2
1,868,003	-		Ga0059261_1760	0.44	+2.7
1,868,003	-		Ga0059261_1760	0.44	+0.3
1,868,003	-		Ga0059261_1760	0.44	+1.7
1,868,003	-		Ga0059261_1760	0.44	+0.5
1,868,003	-		Ga0059261_1760	0.44	-0.9
1,868,004	+				+1.1
1,868,005	-		Ga0059261_1760	0.45	+0.8
1,868,005	-		Ga0059261_1760	0.45	-0.3
1,868,093	+		Ga0059261_1760	0.63	-1.1
1,868,102	+		Ga0059261_1760	0.65	-0.2
1,868,102	+		Ga0059261_1760	0.65	+0.3
1,868,102	+		Ga0059261_1760	0.65	+0.4
1,868,103	-		Ga0059261_1760	0.65	-0.1
1,868,103	-		Ga0059261_1760	0.65	-0.4
1,868,103	-		Ga0059261_1760	0.65	-0.4
1,868,103	-		Ga0059261_1760	0.65	+0.8
1,868,103	-		Ga0059261_1760	0.65	+0.0
1,868,179	+		Ga0059261_1760	0.81	+0.7
1,868,179	+		Ga0059261_1760	0.81	-0.5
1,868,179	+		Ga0059261_1760	0.81	-0.4
1,868,179	+		Ga0059261_1760	0.81	-0.5
1,868,179	+		Ga0059261_1760	0.81	-0.1
1,868,179	+		Ga0059261_1760	0.81	+0.3
1,868,179	+		Ga0059261_1760	0.81	-0.4
1,868,179	+		Ga0059261_1760	0.81	+0.1
1,868,179	+		Ga0059261_1760	0.81	-0.8
1,868,179	+		Ga0059261_1760	0.81	+0.2
1,868,179	+		Ga0059261_1760	0.81	-0.5
1,868,179	+		Ga0059261_1760	0.81	+0.1
1,868,179	+		Ga0059261_1760	0.81	+0.0
1,868,179	+		Ga0059261_1760	0.81	-0.2
1,868,179	+		Ga0059261_1760	0.81	+0.8
1,868,179	+		Ga0059261_1760	0.81	-0.8
1,868,180	-		Ga0059261_1760	0.81	+0.0
1,868,180	-		Ga0059261_1760	0.81	+0.1
1,868,180	-		Ga0059261_1760	0.81	-0.5
1,868,180	-		Ga0059261_1760	0.81	-0.2
1,868,180	-		Ga0059261_1760	0.81	-0.1
1,868,180	-		Ga0059261_1760	0.81	+0.2
1,868,180	-		Ga0059261_1760	0.81	-1.8
1,868,180	-		Ga0059261_1760	0.81	+0.6
1,868,180	-		Ga0059261_1760	0.81	+0.1
1,868,182	-		Ga0059261_1760	0.82	+0.3
1,868,266	+				-0.2
1,868,266	+				-0.3
1,868,267	-				+0.1
1,868,267	-				-0.0
1,868,267	-				+0.3
1,868,267	-				-0.4
1,868,275	+				+0.0
1,868,275	+				-0.2
1,868,302	+				+0.4
1,868,302	+				+0.1
1,868,303	-				-0.8
1,868,353	+				-0.1
1,868,353	+				+0.3
1,868,353	+				+0.1
1,868,353	+				-0.3
1,868,353	+				-0.0
1,868,353	+				-0.8
1,868,353	+				+0.4
1,868,353	+				-0.6
1,868,353	+				-0.1
1,868,354	-				-0.3
1,868,354	-				+0.0
1,868,354	-				+0.4
1,868,354	-				+0.2
1,868,402	+				+0.1
1,868,402	+		Ga0059261_1761	0.23	+0.6
1,868,402	+		Ga0059261_1761	0.23	+0.2
1,868,402	+		Ga0059261_1761	0.23	-0.9
1,868,403	-		Ga0059261_1761	0.23	+0.0
1,868,422	+		Ga0059261_1761	0.29	-0.8
1,868,422	+		Ga0059261_1761	0.29	-0.6
1,868,423	-		Ga0059261_1761	0.30	+0.6
1,868,423	-		Ga0059261_1761	0.30	+0.7
1,868,423	-		Ga0059261_1761	0.30	-0.6
1,868,423	-		Ga0059261_1761	0.30	-0.5
1,868,448	-		Ga0059261_1761	0.38	-0.1
1,868,472	+		Ga0059261_1761	0.46	+1.3
1,868,472	+		Ga0059261_1761	0.46	-0.3
1,868,473	-		Ga0059261_1761	0.46	+0.6
1,868,473	-		Ga0059261_1761	0.46	+0.1
1,868,473	-				+1.1
1,868,540	+		Ga0059261_1761	0.68	+0.1
1,868,540	+		Ga0059261_1761	0.68	-0.1
1,868,540	+				-1.5
1,868,540	+				-0.5
1,868,540	+		Ga0059261_1761	0.68	+0.3
1,868,540	+		Ga0059261_1761	0.68	-0.3
1,868,540	+		Ga0059261_1761	0.68	-0.6
1,868,541	-		Ga0059261_1761	0.68	-0.2
1,868,541	-		Ga0059261_1761	0.68	-1.5
1,868,541	-		Ga0059261_1761	0.68	-0.6
1,868,541	-		Ga0059261_1761	0.68	+0.7
1,868,541	-		Ga0059261_1761	0.68	+0.7
1,868,541	-		Ga0059261_1761	0.68	-0.0
1,868,590	+		Ga0059261_1761	0.84	+0.2
1,868,590	+		Ga0059261_1761	0.84	-0.6
1,868,590	+		Ga0059261_1761	0.84	+0.4
1,868,590	+		Ga0059261_1761	0.84	-0.3
1,868,590	+		Ga0059261_1761	0.84	+0.7
1,868,591	-		Ga0059261_1761	0.85	-0.1
1,868,591	-		Ga0059261_1761	0.85	-0.1
1,868,591	-		Ga0059261_1761	0.85	-0.6
1,868,591	-		Ga0059261_1761	0.85	-1.4
1,868,591	-		Ga0059261_1761	0.85	+0.2
1,868,591	-		Ga0059261_1761	0.85	-0.4
1,868,591	-		Ga0059261_1761	0.85	+0.5
1,868,613	+				+0.5
1,868,614	-				-0.5
1,868,654	-				-0.2
1,868,919	+		Ga0059261_1762	0.89	+1.4
1,868,920	-		Ga0059261_1762	0.89	+0.1
1,868,937	+				+0.1
1,868,937	+				+0.8
1,868,937	+				+0.4
1,868,937	+				+0.2
1,868,938	-				-0.4
1,868,998	+				-0.3
1,868,998	+				-0.1
1,868,998	+				+0.1
1,868,998	+				+0.1
1,868,998	+				-0.2
1,868,999	-				-0.6
1,868,999	-				+0.5
1,868,999	-				-0.2
1,868,999	-				-0.0
1,868,999	-				+0.7
1,868,999	-				-0.0
1,868,999	-				-2.1
1,868,999	-				+0.1
1,868,999	-				-0.5
1,868,999	-				-1.1
1,868,999	-				+1.5
1,868,999	-				+0.5
1,868,999	-				-0.6
1,868,999	-				-0.5
1,869,064	+				-0.4
1,869,064	+				-0.7
1,869,064	+				-2.7
1,869,064	+				-0.1
1,869,064	+				-0.7
1,869,064	+				+0.2
1,869,065	-				-0.1
1,869,065	-				+0.0
1,869,065	-				+0.1
1,869,065	-				+1.8
1,869,065	-				-0.1
1,869,065	-				-0.1
1,869,065	-				-0.3
1,869,065	-				+0.2
1,869,080	+				+0.6
1,869,081	-				+0.5
1,869,101	+				+0.3
1,869,102	-				+0.1
1,869,102	-				+1.4
1,869,122	+				-0.0
1,869,123	-				+0.4
1,869,137	+				-0.7
1,869,137	+				+0.0
1,869,138	-				+0.2
1,869,138	-				+0.8
1,869,138	-				+0.1
1,869,138	-				-0.4
1,869,152	-				+0.3
1,869,172	-		Ga0059261_1763	0.11	+0.8
1,869,245	+		Ga0059261_1763	0.53	+0.3
1,869,245	+		Ga0059261_1763	0.53	-1.0
1,869,246	-		Ga0059261_1763	0.54	-0.2
1,869,246	-		Ga0059261_1763	0.54	-0.1
1,869,246	-		Ga0059261_1763	0.54	-0.4
1,869,246	-		Ga0059261_1763	0.54	+0.0
1,869,246	-		Ga0059261_1763	0.54	+1.4
1,869,298	+		Ga0059261_1763	0.84	+0.1
1,869,328	+				+0.1
1,869,328	+				-0.2
1,869,328	+				+0.6
1,869,329	-				-0.2
1,869,611	+		Ga0059261_1764	0.14	+0.1
1,869,611	+		Ga0059261_1764	0.14	-0.3
1,869,611	+		Ga0059261_1764	0.14	+0.0
1,869,611	+		Ga0059261_1764	0.14	+0.5
1,869,612	-		Ga0059261_1764	0.14	+0.9
1,869,612	-		Ga0059261_1764	0.14	-0.1
1,869,612	-		Ga0059261_1764	0.14	-0.1
1,869,612	-		Ga0059261_1764	0.14	-0.6
1,869,612	-				+0.4
1,869,612	-		Ga0059261_1764	0.14	-0.9
1,869,629	+		Ga0059261_1764	0.15	-0.1
1,869,629	+		Ga0059261_1764	0.15	+0.4
1,869,629	+		Ga0059261_1764	0.15	+0.2
1,869,629	+		Ga0059261_1764	0.15	+1.2
1,869,629	+		Ga0059261_1764	0.15	+0.6
1,869,629	+		Ga0059261_1764	0.15	-0.1
1,869,629	+		Ga0059261_1764	0.15	-0.9
1,869,629	+		Ga0059261_1764	0.15	-0.1
1,869,629	+		Ga0059261_1764	0.15	+0.0
1,869,629	+		Ga0059261_1764	0.15	+0.5
1,869,629	+		Ga0059261_1764	0.15	-0.2
1,869,629	+		Ga0059261_1764	0.15	+0.1
1,869,629	+		Ga0059261_1764	0.15	-0.7
1,869,630	-		Ga0059261_1764	0.15	-0.6
1,869,630	-		Ga0059261_1764	0.15	+0.4
1,869,630	-		Ga0059261_1764	0.15	-0.8
1,869,630	-		Ga0059261_1764	0.15	-0.1
1,869,630	-		Ga0059261_1764	0.15	+0.3
1,869,630	-		Ga0059261_1764	0.15	+0.1
1,869,630	-		Ga0059261_1764	0.15	-0.5
1,869,791	+		Ga0059261_1764	0.23	-0.7
1,869,791	+		Ga0059261_1764	0.23	+0.3
1,869,791	+		Ga0059261_1764	0.23	+0.1
1,869,792	-		Ga0059261_1764	0.23	+0.4
1,869,814	+		Ga0059261_1764	0.24	-0.0
1,869,814	+		Ga0059261_1764	0.24	+0.6
1,869,814	+		Ga0059261_1764	0.24	+0.5
1,869,815	-		Ga0059261_1764	0.24	-1.4
1,869,815	-		Ga0059261_1764	0.24	+0.0
1,869,871	-		Ga0059261_1764	0.27	-0.7
1,869,871	-		Ga0059261_1764	0.27	+0.6
1,869,899	+		Ga0059261_1764	0.28	+0.2
1,869,899	+		Ga0059261_1764	0.28	-0.1
1,869,899	+		Ga0059261_1764	0.28	-0.7
1,869,899	+		Ga0059261_1764	0.28	-0.8
1,869,899	+		Ga0059261_1764	0.28	-1.2
1,869,899	+		Ga0059261_1764	0.28	+0.4
1,869,899	+		Ga0059261_1764	0.28	-0.2
1,869,899	+		Ga0059261_1764	0.28	+0.3
1,869,900	-		Ga0059261_1764	0.28	+0.5
1,869,900	-		Ga0059261_1764	0.28	+0.1
1,869,900	-		Ga0059261_1764	0.28	-0.5
1,869,900	-		Ga0059261_1764	0.28	-0.6
1,869,900	-		Ga0059261_1764	0.28	-0.5
1,869,900	-		Ga0059261_1764	0.28	+0.1
1,869,900	-		Ga0059261_1764	0.28	-1.5
1,869,901	+		Ga0059261_1764	0.28	-0.7
1,869,901	+		Ga0059261_1764	0.28	-0.3
1,869,901	+		Ga0059261_1764	0.28	-0.7
1,869,901	+		Ga0059261_1764	0.28	+1.1
1,869,901	+		Ga0059261_1764	0.28	-0.5
1,869,901	+		Ga0059261_1764	0.28	+0.2
1,869,901	+		Ga0059261_1764	0.28	-1.8
1,869,902	-		Ga0059261_1764	0.28	+0.9
1,869,902	-		Ga0059261_1764	0.28	+0.3
1,869,902	-		Ga0059261_1764	0.28	-0.8
1,869,902	-		Ga0059261_1764	0.28	-0.6
1,869,902	-		Ga0059261_1764	0.28	-0.1
1,869,902	-		Ga0059261_1764	0.28	+0.3
1,869,902	-		Ga0059261_1764	0.28	-0.2
1,869,902	-		Ga0059261_1764	0.28	+0.0