Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1681

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,783,207	+		Ga0059261_1680	0.40	+0.6
1,783,207	+		Ga0059261_1680	0.40	+0.3
1,783,207	+		Ga0059261_1680	0.40	+0.4
1,783,207	+		Ga0059261_1680	0.40	-0.2
1,783,208	-				+0.5
1,783,208	-		Ga0059261_1680	0.40	+0.0
1,783,208	-				-1.3
1,783,208	-		Ga0059261_1680	0.40	-0.2
1,783,208	-		Ga0059261_1680	0.40	+0.1
1,783,208	-		Ga0059261_1680	0.40	-0.3
1,783,208	-		Ga0059261_1680	0.40	-1.1
1,783,208	-		Ga0059261_1680	0.40	+3.4
1,783,208	-		Ga0059261_1680	0.40	-0.3
1,783,208	-		Ga0059261_1680	0.40	+1.0
1,783,208	-		Ga0059261_1680	0.40	+0.7
1,783,562	+		Ga0059261_1680	0.65	-0.2
1,783,562	+				+2.0
1,783,562	+		Ga0059261_1680	0.65	+0.0
1,783,563	-		Ga0059261_1680	0.65	-1.5
1,783,563	-		Ga0059261_1680	0.65	-0.3
1,784,149	+		Ga0059261_1681	0.10	+2.3
1,784,150	-				+0.5
1,784,150	-		Ga0059261_1681	0.10	-0.8
1,784,150	-		Ga0059261_1681	0.10	-0.4
1,784,160	+		Ga0059261_1681	0.11	+0.4
1,784,160	+		Ga0059261_1681	0.11	-0.9
1,784,160	+		Ga0059261_1681	0.11	-1.0
1,784,172	+		Ga0059261_1681	0.12	+0.2
1,784,172	+		Ga0059261_1681	0.12	-0.2
1,784,172	+		Ga0059261_1681	0.12	+1.1
1,784,172	+		Ga0059261_1681	0.12	+0.4
1,784,172	+				+0.6
1,784,173	-		Ga0059261_1681	0.13	+0.4
1,784,173	-		Ga0059261_1681	0.13	-0.7
1,784,173	-		Ga0059261_1681	0.13	+0.1
1,784,173	-		Ga0059261_1681	0.13	+0.3
1,784,206	+		Ga0059261_1681	0.16	+0.3
1,784,206	+		Ga0059261_1681	0.16	+0.8
1,784,206	+		Ga0059261_1681	0.16	+0.2
1,784,207	-		Ga0059261_1681	0.16	+0.2
1,784,207	-		Ga0059261_1681	0.16	+0.5
1,784,207	-		Ga0059261_1681	0.16	-1.0
1,784,232	+		Ga0059261_1681	0.18	+0.4
1,784,232	+		Ga0059261_1681	0.18	-0.7
1,784,233	-		Ga0059261_1681	0.19	+0.2
1,784,233	-		Ga0059261_1681	0.19	+0.1
1,784,233	-		Ga0059261_1681	0.19	+1.8
1,784,233	-		Ga0059261_1681	0.19	-0.2
1,784,247	+		Ga0059261_1681	0.20	-0.1
1,784,247	+		Ga0059261_1681	0.20	-0.6
1,784,247	+		Ga0059261_1681	0.20	-0.5
1,784,248	-		Ga0059261_1681	0.20	+0.5
1,784,248	-		Ga0059261_1681	0.20	-0.1
1,784,248	-		Ga0059261_1681	0.20	+0.6
1,784,248	-		Ga0059261_1681	0.20	+0.5
1,784,248	-		Ga0059261_1681	0.20	+0.2
1,784,248	-		Ga0059261_1681	0.20	-0.3
1,784,250	+		Ga0059261_1681	0.20	+0.3
1,784,250	+		Ga0059261_1681	0.20	-0.4
1,784,250	+		Ga0059261_1681	0.20	+0.8
1,784,250	+		Ga0059261_1681	0.20	-0.0
1,784,250	+		Ga0059261_1681	0.20	-0.2
1,784,250	+		Ga0059261_1681	0.20	-1.3
1,784,250	+		Ga0059261_1681	0.20	-0.7
1,784,250	+		Ga0059261_1681	0.20	-0.4
1,784,250	+		Ga0059261_1681	0.20	+0.7
1,784,251	-		Ga0059261_1681	0.20	+0.0
1,784,251	-		Ga0059261_1681	0.20	+0.2
1,784,251	-		Ga0059261_1681	0.20	+0.3
1,784,251	-		Ga0059261_1681	0.20	-0.4
1,784,251	-		Ga0059261_1681	0.20	-1.1
1,784,251	-		Ga0059261_1681	0.20	+0.1
1,784,251	-		Ga0059261_1681	0.20	-0.3
1,784,251	-		Ga0059261_1681	0.20	-0.0
1,784,251	-		Ga0059261_1681	0.20	-0.1
1,784,265	+		Ga0059261_1681	0.22	-0.0
1,784,265	+		Ga0059261_1681	0.22	-1.0
1,784,265	+		Ga0059261_1681	0.22	-1.0
1,784,265	+		Ga0059261_1681	0.22	+1.8
1,784,265	+		Ga0059261_1681	0.22	-0.4
1,784,265	+		Ga0059261_1681	0.22	-0.1
1,784,266	-		Ga0059261_1681	0.22	+0.0
1,784,266	-		Ga0059261_1681	0.22	-0.1
1,784,266	-		Ga0059261_1681	0.22	-0.7
1,784,266	-		Ga0059261_1681	0.22	-0.1
1,784,266	-		Ga0059261_1681	0.22	+0.8
1,784,343	+		Ga0059261_1681	0.30	-0.5
1,784,343	+		Ga0059261_1681	0.30	-0.5
1,784,344	-		Ga0059261_1681	0.30	-0.1
1,784,475	+		Ga0059261_1681	0.43	-0.4
1,784,476	-		Ga0059261_1681	0.43	-0.3
1,784,476	-		Ga0059261_1681	0.43	+0.3
1,784,476	-		Ga0059261_1681	0.43	+1.0
1,784,476	-		Ga0059261_1681	0.43	-0.2
1,784,636	+		Ga0059261_1681	0.59	-1.0
1,784,636	+		Ga0059261_1681	0.59	-0.3
1,784,636	+		Ga0059261_1681	0.59	-0.0
1,784,636	+		Ga0059261_1681	0.59	-0.5
1,784,637	-		Ga0059261_1681	0.59	-0.4
1,784,637	-		Ga0059261_1681	0.59	+1.0
1,784,637	-		Ga0059261_1681	0.59	+0.5
1,784,637	-		Ga0059261_1681	0.59	+0.8
1,784,733	+		Ga0059261_1681	0.69	-0.4
1,784,734	-		Ga0059261_1681	0.69	+1.3
1,784,734	-		Ga0059261_1681	0.69	-0.2
1,784,734	-		Ga0059261_1681	0.69	-0.6
1,784,734	-		Ga0059261_1681	0.69	-0.5
1,784,793	+		Ga0059261_1681	0.75	-0.4
1,784,868	+		Ga0059261_1681	0.82	+0.0
1,784,868	+		Ga0059261_1681	0.82	-0.8
1,784,868	+		Ga0059261_1681	0.82	-1.0
1,784,868	+		Ga0059261_1681	0.82	-0.4
1,784,868	+		Ga0059261_1681	0.82	-0.8
1,784,868	+		Ga0059261_1681	0.82	+0.2
1,784,869	-		Ga0059261_1681	0.82	+0.0
1,784,869	-		Ga0059261_1681	0.82	-0.6
1,784,869	-		Ga0059261_1681	0.82	-0.2
1,784,869	-		Ga0059261_1681	0.82	-0.7
1,784,869	-		Ga0059261_1681	0.82	-0.5
1,784,956	-				-0.4
1,785,119	+				+0.7
1,785,119	+				+0.6
1,785,131	+				-0.8
1,785,131	+				+1.4
1,785,131	+				-0.5
1,785,131	+				-0.6
1,785,131	+				-0.3
1,785,131	+				+0.8
1,785,131	+				-0.6
1,785,131	+				+0.4
1,785,131	+				-0.0
1,785,131	+				-0.2
1,785,131	+				-0.2
1,785,131	+				-1.3
1,785,131	+				+0.0
1,785,131	+				-0.8
1,785,132	-				+0.0
1,785,132	-				-0.5
1,785,132	-				-1.2
1,785,132	-				-0.2
1,785,132	-				-0.0
1,785,132	-				+0.4
1,785,132	-				+0.0
1,785,132	-				+1.0
1,785,132	-				-0.1
1,785,132	-				+0.2
1,785,132	-				-0.7
1,785,141	+				-0.2
1,785,141	+				-0.3
1,785,260	+		Ga0059261_1682	0.22	+0.0
1,785,260	+		Ga0059261_1682	0.22	-0.7
1,785,260	+		Ga0059261_1682	0.22	+0.8
1,785,260	+		Ga0059261_1682	0.22	+0.1
1,785,260	+		Ga0059261_1682	0.22	-1.5
1,785,260	+		Ga0059261_1682	0.22	+0.0
1,785,260	+		Ga0059261_1682	0.22	+0.4
1,785,260	+		Ga0059261_1682	0.22	+0.2
1,785,260	+		Ga0059261_1682	0.22	-0.1
1,785,261	-		Ga0059261_1682	0.22	+0.0
1,785,261	-		Ga0059261_1682	0.22	+0.0
1,785,261	-		Ga0059261_1682	0.22	+0.4
1,785,261	-		Ga0059261_1682	0.22	-0.0
1,785,261	-		Ga0059261_1682	0.22	-0.0
1,785,301	-		Ga0059261_1682	0.26	+0.0
1,785,301	-		Ga0059261_1682	0.26	+0.6
1,785,301	-		Ga0059261_1682	0.26	+0.0
1,785,302	+		Ga0059261_1682	0.26	+0.7
1,785,302	+		Ga0059261_1682	0.26	-1.5
1,785,302	+		Ga0059261_1682	0.26	-1.0
1,785,303	-		Ga0059261_1682	0.27	+0.0
1,785,303	-		Ga0059261_1682	0.27	-0.2
1,785,303	-				+2.0
1,785,404	+		Ga0059261_1682	0.37	-0.3
1,785,404	+		Ga0059261_1682	0.37	+1.0
1,785,404	+		Ga0059261_1682	0.37	+0.2
1,785,405	-		Ga0059261_1682	0.37	-0.0
1,785,405	-		Ga0059261_1682	0.37	+0.0
1,785,405	-		Ga0059261_1682	0.37	-0.4
1,785,405	-		Ga0059261_1682	0.37	-1.3
1,785,405	-		Ga0059261_1682	0.37	+0.3
1,785,405	-		Ga0059261_1682	0.37	-0.3
1,785,552	-		Ga0059261_1682	0.52	-0.2
1,785,552	-		Ga0059261_1682	0.52	-0.4
1,785,563	+		Ga0059261_1682	0.53	-0.6
1,785,563	+		Ga0059261_1682	0.53	-1.1
1,785,563	+		Ga0059261_1682	0.53	-0.7
1,785,563	+		Ga0059261_1682	0.53	+0.0
1,785,563	+		Ga0059261_1682	0.53	+0.4
1,785,563	+		Ga0059261_1682	0.53	-0.5
1,785,564	-		Ga0059261_1682	0.53	-0.7
1,785,564	-		Ga0059261_1682	0.53	+0.7
1,785,564	-		Ga0059261_1682	0.53	-0.2
1,785,564	-		Ga0059261_1682	0.53	-0.1
1,785,564	-		Ga0059261_1682	0.53	-0.1
1,785,564	-		Ga0059261_1682	0.53	-0.2
1,785,564	-		Ga0059261_1682	0.53	-0.6
1,785,564	-		Ga0059261_1682	0.53	+0.5
1,785,564	-		Ga0059261_1682	0.53	-0.2
1,785,929	+				-0.2
1,786,003	-				+0.0
1,786,028	+				-1.0
1,786,028	+				-0.2
1,786,028	+				-0.2
1,786,028	+				-0.2
1,786,029	-				-0.3
1,786,029	-				-0.3
1,786,036	-				-0.3
1,786,036	-				+0.4
1,786,036	-				+0.1