Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1549

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,620,129	-		Ga0059261_1547	0.36	+0.8
1,620,221	+		Ga0059261_1547	0.45	-0.8
1,620,395	+				-1.0
1,620,395	+		Ga0059261_1547	0.62	-0.0
1,620,396	-		Ga0059261_1547	0.62	-0.8
1,620,396	-		Ga0059261_1547	0.62	-0.7
1,620,396	-		Ga0059261_1547	0.62	+0.1
1,620,396	-				+1.0
1,620,396	-		Ga0059261_1547	0.62	+0.2
1,620,679	-		Ga0059261_1547	0.90	-0.6
1,620,679	-		Ga0059261_1547	0.90	-0.6
1,620,697	-				-1.2
1,620,790	-				-0.0
1,620,792	-				-0.0
1,620,907	+		Ga0059261_1548	0.40	+0.3
1,620,907	+		Ga0059261_1548	0.40	+0.2
1,620,907	+		Ga0059261_1548	0.40	+0.8
1,620,908	-		Ga0059261_1548	0.40	-0.8
1,620,908	-		Ga0059261_1548	0.40	+0.3
1,620,908	-		Ga0059261_1548	0.40	+0.1
1,620,908	-		Ga0059261_1548	0.40	+0.4
1,620,908	-		Ga0059261_1548	0.40	-0.7
1,621,015	+		Ga0059261_1548	0.74	-0.3
1,621,015	+		Ga0059261_1548	0.74	+0.0
1,621,016	-		Ga0059261_1548	0.75	-0.5
1,621,016	-		Ga0059261_1548	0.75	+0.2
1,621,016	-		Ga0059261_1548	0.75	-0.1
1,621,037	+		Ga0059261_1548	0.81	-0.5
1,621,037	+		Ga0059261_1548	0.81	-0.3
1,621,037	+		Ga0059261_1548	0.81	-0.0
1,621,037	+		Ga0059261_1548	0.81	+0.3
1,621,037	+		Ga0059261_1548	0.81	+0.0
1,621,037	+		Ga0059261_1548	0.81	-0.6
1,621,158	-				+0.3
1,621,667	+		Ga0059261_1549	0.71	+2.5
1,621,667	+		Ga0059261_1549	0.71	-0.2
1,621,705	+		Ga0059261_1549	0.76	+0.6
1,621,705	+		Ga0059261_1549	0.76	-0.6
1,621,705	+		Ga0059261_1549	0.76	+0.1
1,621,729	+		Ga0059261_1549	0.79	+0.7
1,621,730	-		Ga0059261_1549	0.79	+0.6
1,621,894	+				+1.0
1,621,894	+				+1.0
1,621,894	+				-0.4
1,621,894	+				+0.3
1,621,894	+				+0.1
1,621,894	+				-0.4
1,621,894	+				+0.1
1,621,894	+				-1.6
1,621,895	-				+0.0
1,621,895	-				+0.2
1,621,895	-				-0.8
1,621,987	-				+0.7
1,621,987	-				-1.4
1,622,175	-		Ga0059261_1550	0.22	-0.2
1,622,183	+		Ga0059261_1550	0.23	-1.0
1,622,184	-		Ga0059261_1550	0.23	-0.9
1,622,184	-		Ga0059261_1550	0.23	+0.4
1,622,184	-		Ga0059261_1550	0.23	-0.4
1,622,310	+		Ga0059261_1550	0.36	+0.2
1,622,310	+		Ga0059261_1550	0.36	+0.2
1,622,310	+		Ga0059261_1550	0.36	+0.7
1,622,310	+		Ga0059261_1550	0.36	+0.3
1,622,311	-		Ga0059261_1550	0.37	+0.3
1,622,311	-		Ga0059261_1550	0.37	-0.3
1,622,361	+		Ga0059261_1550	0.42	-0.2
1,622,450	+		Ga0059261_1550	0.51	-0.6
1,622,450	+				+1.5
1,622,450	+		Ga0059261_1550	0.51	-0.1
1,622,451	-		Ga0059261_1550	0.51	-1.0
1,622,491	+		Ga0059261_1550	0.55	-0.2
1,622,491	+		Ga0059261_1550	0.55	+0.3
1,622,491	+		Ga0059261_1550	0.55	-0.5
1,622,492	-		Ga0059261_1550	0.55	-0.2
1,622,492	-		Ga0059261_1550	0.55	+0.2
1,622,492	-		Ga0059261_1550	0.55	+1.5
1,622,492	-		Ga0059261_1550	0.55	-0.1
1,622,495	+		Ga0059261_1550	0.56	+0.1
1,622,495	+		Ga0059261_1550	0.56	+0.1
1,622,495	+		Ga0059261_1550	0.56	+0.4
1,622,495	+		Ga0059261_1550	0.56	+0.4
1,622,495	+		Ga0059261_1550	0.56	-0.5
1,622,495	+		Ga0059261_1550	0.56	+0.5
1,622,495	+		Ga0059261_1550	0.56	-0.3
1,622,496	-		Ga0059261_1550	0.56	-0.1
1,622,496	-		Ga0059261_1550	0.56	-0.7
1,622,525	+		Ga0059261_1550	0.59	-0.5
1,622,526	-		Ga0059261_1550	0.59	-1.2
1,622,614	+		Ga0059261_1550	0.68	+0.0
1,622,615	-				+3.0
1,622,615	-		Ga0059261_1550	0.68	+1.2
1,622,615	-		Ga0059261_1550	0.68	+0.4
1,622,713	-		Ga0059261_1550	0.79	-1.0
1,622,787	+		Ga0059261_1550	0.86	-0.4
1,622,787	+		Ga0059261_1550	0.86	+0.4
1,622,787	+		Ga0059261_1550	0.86	+2.0
1,622,787	+		Ga0059261_1550	0.86	+0.7
1,622,787	+		Ga0059261_1550	0.86	+0.5
1,622,787	+		Ga0059261_1550	0.86	-0.4
1,622,788	-		Ga0059261_1550	0.86	+0.5
1,622,788	-		Ga0059261_1550	0.86	-0.3
1,622,788	-		Ga0059261_1550	0.86	+0.4
1,622,788	-		Ga0059261_1550	0.86	+0.4
1,622,880	+				-0.3