Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1144

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,167,922	+				+0.1
1,167,923	-				+0.3
1,167,961	-				+1.5
1,167,995	+				-0.2
1,167,995	+				-0.2
1,167,996	-				+0.1
1,167,996	-				-0.7
1,167,996	-				+0.2
1,168,032	+				-0.4
1,168,032	+				-1.1
1,168,032	+				-0.1
1,168,033	-				-0.8
1,168,033	-				-0.4
1,168,035	+				-1.4
1,168,037	+				+0.7
1,168,037	+				-0.0
1,168,037	+				-0.3
1,168,038	-				+0.6
1,168,038	-				-1.5
1,168,065	-				+0.3
1,168,075	-				+1.9
1,168,234	+		Ga0059261_1143	0.17	+1.3
1,168,235	-		Ga0059261_1143	0.17	-0.6
1,168,235	-		Ga0059261_1143	0.17	+0.0
1,168,235	-		Ga0059261_1143	0.17	-0.4
1,168,297	+		Ga0059261_1143	0.26	+0.1
1,168,297	+		Ga0059261_1143	0.26	-0.6
1,168,298	-		Ga0059261_1143	0.26	+0.2
1,168,379	-		Ga0059261_1143	0.37	-0.7
1,168,415	-		Ga0059261_1143	0.42	+0.4
1,168,415	-		Ga0059261_1143	0.42	+0.4
1,168,415	-		Ga0059261_1143	0.42	+0.7
1,168,416	+				+1.9
1,168,416	+		Ga0059261_1143	0.42	-0.0
1,168,417	-		Ga0059261_1143	0.42	+0.3
1,168,431	+		Ga0059261_1143	0.44	-0.7
1,168,432	-		Ga0059261_1143	0.44	+0.5
1,168,432	-		Ga0059261_1143	0.44	+1.3
1,168,432	-		Ga0059261_1143	0.44	+0.6
1,168,768	+		Ga0059261_1143	0.89	+0.1
1,168,768	+		Ga0059261_1143	0.89	+0.2
1,168,768	+		Ga0059261_1143	0.89	+0.2
1,168,768	+		Ga0059261_1143	0.89	+0.5
1,168,768	+		Ga0059261_1143	0.89	+0.1
1,168,768	+		Ga0059261_1143	0.89	+0.1
1,168,769	-		Ga0059261_1143	0.89	-0.3
1,168,769	-		Ga0059261_1143	0.89	+0.6
1,168,769	-		Ga0059261_1143	0.89	-0.4
1,168,888	+				+0.3
1,168,888	+				+0.5
1,168,888	+				-0.4
1,168,888	+				-1.2
1,168,889	-				+0.2
1,168,889	-				+0.4
1,168,889	-				-0.3
1,168,889	-				-0.1
1,168,889	-				-0.1
1,169,015	+		Ga0059261_1144	0.17	+0.7
1,169,015	+		Ga0059261_1144	0.17	-0.1
1,169,015	+		Ga0059261_1144	0.17	+0.7
1,169,016	-		Ga0059261_1144	0.17	+0.1
1,169,016	-		Ga0059261_1144	0.17	+0.1
1,169,016	-		Ga0059261_1144	0.17	-0.7
1,169,114	+		Ga0059261_1144	0.29	+0.6
1,169,114	+		Ga0059261_1144	0.29	+0.5
1,169,114	+		Ga0059261_1144	0.29	+0.7
1,169,115	-		Ga0059261_1144	0.30	-0.8
1,169,115	-		Ga0059261_1144	0.30	+0.1
1,169,160	-		Ga0059261_1144	0.35	+0.3
1,169,186	+		Ga0059261_1144	0.39	+0.8
1,169,187	-		Ga0059261_1144	0.39	-0.0
1,169,222	+		Ga0059261_1144	0.43	-0.8
1,169,222	+		Ga0059261_1144	0.43	+0.3
1,169,223	-		Ga0059261_1144	0.43	+0.0
1,169,223	-		Ga0059261_1144	0.43	+0.5
1,169,223	-		Ga0059261_1144	0.43	+0.7
1,169,224	+		Ga0059261_1144	0.43	-1.0
1,169,224	+		Ga0059261_1144	0.43	-0.1
1,169,224	+		Ga0059261_1144	0.43	-0.2
1,169,225	-		Ga0059261_1144	0.44	+0.4
1,169,225	-		Ga0059261_1144	0.44	-0.5
1,169,225	-		Ga0059261_1144	0.44	+0.8
1,169,225	-		Ga0059261_1144	0.44	+0.5
1,169,225	-		Ga0059261_1144	0.44	-0.2
1,169,225	-		Ga0059261_1144	0.44	-2.8
1,169,600	+				+0.6
1,169,600	+				+0.2
1,169,601	-				+0.2
1,169,601	-				-0.9
1,169,601	-				-0.2
1,169,601	-				+0.5
1,170,049	-		Ga0059261_1145	0.86	-0.4
1,170,109	+				+0.9
1,170,109	+				+0.9
1,170,109	+				-0.2
1,170,109	+				-0.1
1,170,109	+				-1.1
1,170,109	+				+0.2
1,170,109	+				+0.2
1,170,110	-				-0.3
1,170,110	-				-0.7
1,170,110	-				-1.9
1,170,110	-				-0.1
1,170,110	-				+0.6
1,170,110	-				+0.4
1,170,110	-				+0.2
1,170,132	+				-0.1
1,170,132	+				-0.9
1,170,132	+				+0.0
1,170,132	+				-1.1
1,170,132	+				-0.4
1,170,132	+				-0.8
1,170,132	+				+0.5
1,170,132	+				-2.2
1,170,132	+				+1.4
1,170,132	+				+0.5
1,170,132	+				-0.4
1,170,132	+				-0.1
1,170,132	+				-1.5
1,170,132	+				+0.5
1,170,132	+				+0.9
1,170,132	+				-0.5
1,170,133	-				-1.1
1,170,133	-				+0.7
1,170,133	-				+0.1
1,170,133	-				-0.3
1,170,133	-				+0.2
1,170,133	-				-0.5
1,170,133	-				-0.7
1,170,133	-				-0.1
1,170,133	-				-0.7
1,170,560	+		Ga0059261_1146	0.57	-0.6
1,170,561	-		Ga0059261_1146	0.57	+0.1