Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0755 and Ga0059261_0756 are separated by 97 nucleotides Ga0059261_0756 and Ga0059261_0757 are separated by 0 nucleotides Ga0059261_0757 and Ga0059261_0758 are separated by 149 nucleotides
Ga0059261_0755: Ga0059261_0755 - Glycosyltransferase, at 781,759 to 782,913
_0755
Ga0059261_0756: Ga0059261_0756 - Uncharacterized protein conserved in bacteria, at 783,011 to 783,325
_0756
Ga0059261_0757: Ga0059261_0757 - Predicted transcriptional regulators, at 783,326 to 783,889
_0757
Ga0059261_0758: Ga0059261_0758 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 784,039 to 785,360
_0758
Position (kb) 783
784 Strain fitness (log2 ratio) -1
0
1 at 782.911 kb on + strand at 782.911 kb on + strand at 782.911 kb on + strand at 782.911 kb on + strand at 782.911 kb on + strand at 782.911 kb on + strand at 782.912 kb on - strand at 782.912 kb on - strand at 782.912 kb on - strand at 783.012 kb on + strand at 783.024 kb on + strand at 783.024 kb on + strand at 783.024 kb on + strand at 783.024 kb on + strand at 783.025 kb on - strand at 783.025 kb on - strand at 783.143 kb on - strand, within Ga0059261_0756 at 783.244 kb on + strand, within Ga0059261_0756 at 783.244 kb on + strand, within Ga0059261_0756 at 783.244 kb on + strand, within Ga0059261_0756 at 783.244 kb on + strand, within Ga0059261_0756 at 783.244 kb on + strand, within Ga0059261_0756 at 783.244 kb on + strand, within Ga0059261_0756 at 783.245 kb on - strand, within Ga0059261_0756 at 783.245 kb on - strand, within Ga0059261_0756 at 783.245 kb on - strand, within Ga0059261_0756 at 783.245 kb on - strand, within Ga0059261_0756 at 783.317 kb on + strand at 783.317 kb on + strand at 783.317 kb on + strand at 783.317 kb on + strand at 783.318 kb on - strand at 783.318 kb on - strand at 783.318 kb on - strand at 783.318 kb on - strand at 783.327 kb on + strand at 783.327 kb on + strand at 783.327 kb on + strand at 783.328 kb on - strand at 783.328 kb on - strand at 783.328 kb on - strand at 783.381 kb on - strand at 783.381 kb on - strand at 783.381 kb on - strand at 783.381 kb on - strand at 783.530 kb on - strand, within Ga0059261_0757 at 783.670 kb on - strand, within Ga0059261_0757 at 783.670 kb on - strand, within Ga0059261_0757 at 783.670 kb on - strand, within Ga0059261_0757 at 783.712 kb on - strand, within Ga0059261_0757 at 783.981 kb on + strand at 784.026 kb on + strand at 784.026 kb on + strand at 784.026 kb on + strand at 784.026 kb on + strand at 784.027 kb on - strand at 784.027 kb on - strand at 784.027 kb on - strand at 784.027 kb on - strand at 784.027 kb on - strand at 784.029 kb on - strand at 784.029 kb on - strand at 784.029 kb on - strand at 784.310 kb on + strand, within Ga0059261_0758 at 784.770 kb on + strand, within Ga0059261_0758 at 784.771 kb on - strand, within Ga0059261_0758 at 784.794 kb on + strand, within Ga0059261_0758 at 784.794 kb on + strand, within Ga0059261_0758 at 784.794 kb on + strand, within Ga0059261_0758 at 784.794 kb on + strand, within Ga0059261_0758 at 784.794 kb on + strand, within Ga0059261_0758 at 784.794 kb on + strand, within Ga0059261_0758 at 784.794 kb on + strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.795 kb on - strand, within Ga0059261_0758 at 784.854 kb on + strand, within Ga0059261_0758 at 784.855 kb on - strand, within Ga0059261_0758 at 784.855 kb on - strand, within Ga0059261_0758 at 784.857 kb on + strand, within Ga0059261_0758 at 784.858 kb on - strand, within Ga0059261_0758 at 784.858 kb on - strand, within Ga0059261_0758 at 784.858 kb on - strand, within Ga0059261_0758
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium lysine 5 mM remove 782,911 + -1.7 782,911 + +0.4 782,911 + -0.2 782,911 + +0.7 782,911 + +0.1 782,911 + +0.5 782,912 - -0.9 782,912 - +0.1 782,912 - -0.4 783,012 + -1.1 783,024 + -0.2 783,024 + -0.9 783,024 + -0.4 783,024 + +0.7 783,025 - -0.0 783,025 - +0.1 783,143 - Ga0059261_0756 0.42 +0.1 783,244 + Ga0059261_0756 0.74 -0.1 783,244 + Ga0059261_0756 0.74 -0.6 783,244 + Ga0059261_0756 0.74 -0.2 783,244 + Ga0059261_0756 0.74 -0.3 783,244 + Ga0059261_0756 0.74 -1.2 783,244 + Ga0059261_0756 0.74 -0.1 783,245 - Ga0059261_0756 0.74 +0.0 783,245 - Ga0059261_0756 0.74 +0.8 783,245 - Ga0059261_0756 0.74 +0.9 783,245 - Ga0059261_0756 0.74 -1.1 783,317 + +0.4 783,317 + -0.1 783,317 + -0.0 783,317 + +0.4 783,318 - -0.1 783,318 - -1.6 783,318 - +0.6 783,318 - +0.2 783,327 + -0.3 783,327 + -0.4 783,327 + +0.1 783,328 - +0.1 783,328 - -0.2 783,328 - +0.4 783,381 - +0.4 783,381 - +0.8 783,381 - +0.6 783,381 - +1.5 783,530 - Ga0059261_0757 0.36 -0.1 783,670 - Ga0059261_0757 0.61 +0.6 783,670 - Ga0059261_0757 0.61 +0.5 783,670 - Ga0059261_0757 0.61 -1.1 783,712 - Ga0059261_0757 0.68 +0.5 783,981 + -0.8 784,026 + -0.5 784,026 + +0.2 784,026 + +0.4 784,026 + +0.4 784,027 - +0.8 784,027 - +1.4 784,027 - -1.4 784,027 - -0.2 784,027 - -0.5 784,029 - -0.1 784,029 - +0.1 784,029 - -0.4 784,310 + Ga0059261_0758 0.20 -0.6 784,770 + Ga0059261_0758 0.55 +0.9 784,771 - Ga0059261_0758 0.55 +0.2 784,794 + Ga0059261_0758 0.57 -0.1 784,794 + Ga0059261_0758 0.57 +0.1 784,794 + Ga0059261_0758 0.57 -0.9 784,794 + Ga0059261_0758 0.57 -0.2 784,794 + Ga0059261_0758 0.57 -0.1 784,794 + Ga0059261_0758 0.57 +0.1 784,794 + Ga0059261_0758 0.57 -0.9 784,795 - Ga0059261_0758 0.57 +0.4 784,795 - Ga0059261_0758 0.57 +0.4 784,795 - Ga0059261_0758 0.57 +0.0 784,795 - Ga0059261_0758 0.57 -0.3 784,795 - Ga0059261_0758 0.57 +0.3 784,795 - Ga0059261_0758 0.57 -0.6 784,795 - Ga0059261_0758 0.57 +0.3 784,795 - Ga0059261_0758 0.57 -1.1 784,795 - Ga0059261_0758 0.57 -0.4 784,795 - Ga0059261_0758 0.57 -0.4 784,854 + Ga0059261_0758 0.62 -0.9 784,855 - Ga0059261_0758 0.62 +0.7 784,855 - Ga0059261_0758 0.62 +0.2 784,857 + Ga0059261_0758 0.62 +0.4 784,858 - Ga0059261_0758 0.62 +0.0 784,858 - Ga0059261_0758 0.62 -0.2 784,858 - Ga0059261_0758 0.62 -1.2
Or see this region's nucleotide sequence