Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0743 and Ga0059261_0744 overlap by 1 nucleotides Ga0059261_0744 and Ga0059261_0745 overlap by 4 nucleotides Ga0059261_0745 and Ga0059261_0746 are separated by 86 nucleotides
Ga0059261_0743: Ga0059261_0743 - Kef-type K+ transport systems, membrane components, at 772,624 to 774,441
_0743
Ga0059261_0744: Ga0059261_0744 - NifU homolog involved in Fe-S cluster formation, at 774,441 to 774,875
_0744
Ga0059261_0745: Ga0059261_0745 - Uncharacterized membrane protein, required for colicin V production, at 774,872 to 775,447
_0745
Ga0059261_0746: Ga0059261_0746 - Predicted permease, DMT superfamily, at 775,534 to 776,433
_0746
Position (kb) 774
775
776 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 774.324 kb on - strand at 774.398 kb on + strand at 774.408 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.410 kb on + strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.411 kb on - strand at 774.450 kb on + strand at 774.450 kb on + strand at 774.450 kb on + strand at 774.450 kb on + strand at 774.450 kb on + strand at 774.450 kb on + strand at 774.450 kb on + strand at 774.451 kb on - strand at 774.887 kb on - strand at 774.887 kb on - strand at 775.008 kb on + strand, within Ga0059261_0745 at 775.009 kb on - strand, within Ga0059261_0745 at 775.063 kb on + strand, within Ga0059261_0745 at 775.063 kb on + strand at 775.064 kb on - strand, within Ga0059261_0745 at 775.064 kb on - strand, within Ga0059261_0745 at 775.078 kb on + strand, within Ga0059261_0745 at 775.426 kb on + strand at 775.426 kb on + strand at 775.451 kb on + strand at 775.451 kb on + strand at 775.451 kb on + strand at 775.452 kb on - strand at 775.452 kb on - strand at 775.482 kb on + strand at 775.483 kb on - strand at 775.516 kb on + strand at 775.516 kb on + strand at 775.517 kb on - strand at 775.517 kb on - strand at 775.517 kb on - strand at 775.517 kb on - strand at 775.517 kb on - strand at 775.517 kb on - strand at 775.522 kb on - strand at 775.623 kb on + strand at 775.623 kb on + strand at 775.624 kb on - strand, within Ga0059261_0746 at 775.636 kb on + strand, within Ga0059261_0746 at 775.636 kb on + strand, within Ga0059261_0746 at 775.651 kb on + strand, within Ga0059261_0746 at 775.651 kb on + strand, within Ga0059261_0746 at 775.681 kb on + strand, within Ga0059261_0746 at 775.682 kb on - strand, within Ga0059261_0746 at 775.682 kb on - strand, within Ga0059261_0746 at 775.927 kb on + strand, within Ga0059261_0746 at 775.928 kb on - strand, within Ga0059261_0746 at 775.928 kb on - strand, within Ga0059261_0746 at 775.930 kb on - strand, within Ga0059261_0746 at 776.041 kb on + strand, within Ga0059261_0746 at 776.099 kb on - strand, within Ga0059261_0746 at 776.125 kb on + strand, within Ga0059261_0746 at 776.125 kb on + strand, within Ga0059261_0746 at 776.125 kb on + strand, within Ga0059261_0746 at 776.206 kb on + strand, within Ga0059261_0746 at 776.207 kb on - strand, within Ga0059261_0746 at 776.207 kb on - strand, within Ga0059261_0746 at 776.281 kb on + strand, within Ga0059261_0746 at 776.281 kb on + strand, within Ga0059261_0746 at 776.281 kb on + strand, within Ga0059261_0746 at 776.281 kb on + strand, within Ga0059261_0746 at 776.281 kb on + strand, within Ga0059261_0746 at 776.281 kb on + strand, within Ga0059261_0746 at 776.282 kb on - strand, within Ga0059261_0746 at 776.282 kb on - strand, within Ga0059261_0746 at 776.282 kb on - strand, within Ga0059261_0746 at 776.282 kb on - strand, within Ga0059261_0746 at 776.282 kb on - strand, within Ga0059261_0746 at 776.282 kb on - strand, within Ga0059261_0746 at 776.332 kb on - strand, within Ga0059261_0746 at 776.444 kb on + strand at 776.444 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium lysine 5 mM remove 774,324 - -1.1 774,398 + -0.6 774,408 + -0.4 774,410 + +0.2 774,410 + -0.1 774,410 + -0.5 774,410 + +0.5 774,410 + -0.2 774,410 + -0.5 774,410 + +0.5 774,410 + -0.2 774,410 + +0.1 774,410 + +0.2 774,410 + +0.9 774,410 + -0.3 774,410 + +0.3 774,410 + +0.2 774,411 - -1.6 774,411 - -0.5 774,411 - +0.9 774,411 - +0.9 774,411 - +0.9 774,411 - -0.9 774,411 - +0.3 774,411 - +1.9 774,411 - +0.2 774,411 - -0.5 774,411 - -0.1 774,411 - -0.1 774,411 - -0.1 774,411 - +0.2 774,411 - +0.2 774,411 - -2.6 774,411 - +0.2 774,450 + -0.7 774,450 + +1.7 774,450 + +0.5 774,450 + -0.0 774,450 + -0.6 774,450 + +0.2 774,450 + -0.1 774,451 - -0.5 774,887 - +0.6 774,887 - +0.7 775,008 + Ga0059261_0745 0.24 +0.4 775,009 - Ga0059261_0745 0.24 -0.3 775,063 + Ga0059261_0745 0.33 -0.1 775,063 + -0.4 775,064 - Ga0059261_0745 0.33 +0.5 775,064 - Ga0059261_0745 0.33 -0.3 775,078 + Ga0059261_0745 0.36 +0.4 775,426 + +0.6 775,426 + +0.0 775,451 + -1.2 775,451 + -1.0 775,451 + -0.2 775,452 - +0.4 775,452 - +0.6 775,482 + -0.1 775,483 - +0.6 775,516 + +0.1 775,516 + -0.2 775,517 - +0.9 775,517 - +2.9 775,517 - -0.1 775,517 - -0.4 775,517 - +0.9 775,517 - -0.7 775,522 - -0.2 775,623 + +1.4 775,623 + -1.8 775,624 - Ga0059261_0746 0.10 +0.1 775,636 + Ga0059261_0746 0.11 -0.4 775,636 + Ga0059261_0746 0.11 -0.1 775,651 + Ga0059261_0746 0.13 -1.1 775,651 + Ga0059261_0746 0.13 -0.7 775,681 + Ga0059261_0746 0.16 -0.7 775,682 - Ga0059261_0746 0.16 -0.3 775,682 - Ga0059261_0746 0.16 +0.0 775,927 + Ga0059261_0746 0.44 +0.5 775,928 - Ga0059261_0746 0.44 +0.0 775,928 - Ga0059261_0746 0.44 +0.4 775,930 - Ga0059261_0746 0.44 +0.3 776,041 + Ga0059261_0746 0.56 -0.2 776,099 - Ga0059261_0746 0.63 +0.4 776,125 + Ga0059261_0746 0.66 -0.8 776,125 + Ga0059261_0746 0.66 -0.1 776,125 + Ga0059261_0746 0.66 -0.2 776,206 + Ga0059261_0746 0.75 -1.1 776,207 - Ga0059261_0746 0.75 +0.8 776,207 - Ga0059261_0746 0.75 +0.1 776,281 + Ga0059261_0746 0.83 +0.1 776,281 + Ga0059261_0746 0.83 +0.8 776,281 + Ga0059261_0746 0.83 +1.0 776,281 + Ga0059261_0746 0.83 +1.3 776,281 + Ga0059261_0746 0.83 +0.2 776,281 + Ga0059261_0746 0.83 -0.9 776,282 - Ga0059261_0746 0.83 -0.1 776,282 - Ga0059261_0746 0.83 +0.5 776,282 - Ga0059261_0746 0.83 -0.2 776,282 - Ga0059261_0746 0.83 +0.2 776,282 - Ga0059261_0746 0.83 -0.2 776,282 - Ga0059261_0746 0.83 +0.1 776,332 - Ga0059261_0746 0.89 -0.4 776,444 + +0.2 776,444 + +0.9
Or see this region's nucleotide sequence