Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0224 and Ga0059261_0225 overlap by 4 nucleotides Ga0059261_0225 and Ga0059261_0226 are separated by 9 nucleotides Ga0059261_0226 and Ga0059261_0227 overlap by 4 nucleotides
Ga0059261_0224: Ga0059261_0224 - Exopolyphosphatase, at 213,372 to 214,874
_0224
Ga0059261_0225: Ga0059261_0225 - polyphosphate kinase 1, at 214,871 to 217,045
_0225
Ga0059261_0226: Ga0059261_0226 - Bacterial dnaA protein, at 217,055 to 217,678
_0226
Ga0059261_0227: Ga0059261_0227 - hypothetical protein, at 217,675 to 218,949
_0227
Position (kb) 214
215
216
217
218 Strain fitness (log2 ratio) -1
0
1
2 at 213.953 kb on - strand, within Ga0059261_0224 at 213.953 kb on - strand, within Ga0059261_0224 at 214.156 kb on + strand, within Ga0059261_0224 at 214.157 kb on - strand, within Ga0059261_0224 at 214.157 kb on - strand, within Ga0059261_0224 at 214.157 kb on - strand, within Ga0059261_0224 at 214.237 kb on + strand, within Ga0059261_0224 at 214.237 kb on + strand, within Ga0059261_0224 at 214.238 kb on - strand, within Ga0059261_0224 at 214.238 kb on - strand at 214.765 kb on + strand at 214.765 kb on + strand at 214.765 kb on + strand at 214.766 kb on - strand at 214.977 kb on + strand at 215.022 kb on + strand at 215.023 kb on - strand at 215.023 kb on - strand at 215.023 kb on - strand at 215.281 kb on + strand, within Ga0059261_0225 at 215.281 kb on + strand, within Ga0059261_0225 at 215.281 kb on + strand, within Ga0059261_0225 at 215.282 kb on - strand, within Ga0059261_0225 at 215.282 kb on - strand, within Ga0059261_0225 at 215.282 kb on - strand, within Ga0059261_0225 at 215.282 kb on - strand, within Ga0059261_0225 at 215.370 kb on + strand, within Ga0059261_0225 at 215.370 kb on + strand, within Ga0059261_0225 at 215.371 kb on - strand, within Ga0059261_0225 at 215.371 kb on - strand, within Ga0059261_0225 at 215.371 kb on - strand, within Ga0059261_0225 at 215.465 kb on + strand, within Ga0059261_0225 at 215.465 kb on + strand, within Ga0059261_0225 at 215.465 kb on + strand, within Ga0059261_0225 at 215.466 kb on - strand, within Ga0059261_0225 at 215.466 kb on - strand, within Ga0059261_0225 at 215.466 kb on - strand, within Ga0059261_0225 at 215.466 kb on - strand, within Ga0059261_0225 at 215.466 kb on - strand, within Ga0059261_0225 at 215.466 kb on - strand, within Ga0059261_0225 at 215.538 kb on + strand, within Ga0059261_0225 at 215.538 kb on + strand, within Ga0059261_0225 at 215.538 kb on + strand, within Ga0059261_0225 at 215.539 kb on - strand, within Ga0059261_0225 at 215.550 kb on + strand, within Ga0059261_0225 at 215.550 kb on + strand, within Ga0059261_0225 at 215.550 kb on + strand, within Ga0059261_0225 at 215.550 kb on + strand at 215.550 kb on + strand, within Ga0059261_0225 at 215.551 kb on - strand, within Ga0059261_0225 at 215.616 kb on + strand, within Ga0059261_0225 at 215.616 kb on + strand, within Ga0059261_0225 at 215.616 kb on + strand, within Ga0059261_0225 at 215.616 kb on + strand, within Ga0059261_0225 at 215.616 kb on + strand, within Ga0059261_0225 at 215.617 kb on - strand, within Ga0059261_0225 at 215.617 kb on - strand, within Ga0059261_0225 at 215.640 kb on + strand, within Ga0059261_0225 at 215.641 kb on - strand, within Ga0059261_0225 at 215.641 kb on - strand, within Ga0059261_0225 at 215.641 kb on - strand, within Ga0059261_0225 at 215.641 kb on - strand, within Ga0059261_0225 at 215.664 kb on + strand, within Ga0059261_0225 at 215.664 kb on + strand, within Ga0059261_0225 at 215.664 kb on + strand, within Ga0059261_0225 at 215.664 kb on + strand, within Ga0059261_0225 at 215.664 kb on + strand, within Ga0059261_0225 at 215.665 kb on - strand, within Ga0059261_0225 at 215.665 kb on - strand, within Ga0059261_0225 at 215.665 kb on - strand, within Ga0059261_0225 at 215.665 kb on - strand, within Ga0059261_0225 at 215.665 kb on - strand, within Ga0059261_0225 at 215.665 kb on - strand, within Ga0059261_0225 at 215.739 kb on + strand, within Ga0059261_0225 at 215.739 kb on + strand, within Ga0059261_0225 at 215.739 kb on + strand at 215.739 kb on + strand, within Ga0059261_0225 at 215.739 kb on + strand, within Ga0059261_0225 at 215.740 kb on - strand, within Ga0059261_0225 at 215.740 kb on - strand, within Ga0059261_0225 at 215.740 kb on - strand, within Ga0059261_0225 at 215.740 kb on - strand, within Ga0059261_0225 at 215.740 kb on - strand, within Ga0059261_0225 at 215.899 kb on - strand, within Ga0059261_0225 at 215.980 kb on - strand, within Ga0059261_0225 at 216.069 kb on + strand, within Ga0059261_0225 at 216.069 kb on + strand, within Ga0059261_0225 at 216.070 kb on - strand, within Ga0059261_0225 at 216.276 kb on + strand, within Ga0059261_0225 at 216.277 kb on - strand, within Ga0059261_0225 at 216.277 kb on - strand, within Ga0059261_0225 at 216.277 kb on - strand, within Ga0059261_0225 at 216.414 kb on + strand, within Ga0059261_0225 at 216.414 kb on + strand, within Ga0059261_0225 at 216.414 kb on + strand, within Ga0059261_0225 at 216.415 kb on - strand, within Ga0059261_0225 at 216.975 kb on + strand at 216.976 kb on - strand at 216.976 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium lysine 5 mM remove 213,953 - Ga0059261_0224 0.39 +0.6 213,953 - Ga0059261_0224 0.39 -0.1 214,156 + Ga0059261_0224 0.52 +0.4 214,157 - Ga0059261_0224 0.52 -0.4 214,157 - Ga0059261_0224 0.52 +0.9 214,157 - Ga0059261_0224 0.52 -1.3 214,237 + Ga0059261_0224 0.58 -0.9 214,237 + Ga0059261_0224 0.58 +0.5 214,238 - Ga0059261_0224 0.58 -0.1 214,238 - -1.4 214,765 + -0.7 214,765 + -0.5 214,765 + +0.7 214,766 - -0.4 214,977 + -1.2 215,022 + -0.0 215,023 - +0.2 215,023 - -0.2 215,023 - +1.5 215,281 + Ga0059261_0225 0.19 -0.2 215,281 + Ga0059261_0225 0.19 +0.6 215,281 + Ga0059261_0225 0.19 -0.3 215,282 - Ga0059261_0225 0.19 +1.0 215,282 - Ga0059261_0225 0.19 +0.4 215,282 - Ga0059261_0225 0.19 +0.9 215,282 - Ga0059261_0225 0.19 -0.4 215,370 + Ga0059261_0225 0.23 +0.6 215,370 + Ga0059261_0225 0.23 +1.3 215,371 - Ga0059261_0225 0.23 +0.4 215,371 - Ga0059261_0225 0.23 -0.4 215,371 - Ga0059261_0225 0.23 -0.3 215,465 + Ga0059261_0225 0.27 +0.6 215,465 + Ga0059261_0225 0.27 +0.1 215,465 + Ga0059261_0225 0.27 -0.7 215,466 - Ga0059261_0225 0.27 +1.9 215,466 - Ga0059261_0225 0.27 +1.3 215,466 - Ga0059261_0225 0.27 -0.4 215,466 - Ga0059261_0225 0.27 +0.3 215,466 - Ga0059261_0225 0.27 +1.9 215,466 - Ga0059261_0225 0.27 -0.1 215,538 + Ga0059261_0225 0.31 +0.6 215,538 + Ga0059261_0225 0.31 -0.4 215,538 + Ga0059261_0225 0.31 +0.5 215,539 - Ga0059261_0225 0.31 +0.2 215,550 + Ga0059261_0225 0.31 -0.1 215,550 + Ga0059261_0225 0.31 +0.1 215,550 + Ga0059261_0225 0.31 +0.3 215,550 + +0.9 215,550 + Ga0059261_0225 0.31 +1.4 215,551 - Ga0059261_0225 0.31 +0.4 215,616 + Ga0059261_0225 0.34 -0.1 215,616 + Ga0059261_0225 0.34 +0.3 215,616 + Ga0059261_0225 0.34 -0.1 215,616 + Ga0059261_0225 0.34 -0.4 215,616 + Ga0059261_0225 0.34 +0.0 215,617 - Ga0059261_0225 0.34 +0.1 215,617 - Ga0059261_0225 0.34 +0.5 215,640 + Ga0059261_0225 0.35 +0.3 215,641 - Ga0059261_0225 0.35 -0.4 215,641 - Ga0059261_0225 0.35 +0.9 215,641 - Ga0059261_0225 0.35 -0.0 215,641 - Ga0059261_0225 0.35 +0.6 215,664 + Ga0059261_0225 0.36 +0.1 215,664 + Ga0059261_0225 0.36 -0.1 215,664 + Ga0059261_0225 0.36 -0.6 215,664 + Ga0059261_0225 0.36 +0.1 215,664 + Ga0059261_0225 0.36 +0.0 215,665 - Ga0059261_0225 0.37 +0.4 215,665 - Ga0059261_0225 0.37 -0.7 215,665 - Ga0059261_0225 0.37 -0.1 215,665 - Ga0059261_0225 0.37 -0.6 215,665 - Ga0059261_0225 0.37 -0.2 215,665 - Ga0059261_0225 0.37 -1.1 215,739 + Ga0059261_0225 0.40 +0.2 215,739 + Ga0059261_0225 0.40 +0.1 215,739 + +0.5 215,739 + Ga0059261_0225 0.40 +0.6 215,739 + Ga0059261_0225 0.40 -0.2 215,740 - Ga0059261_0225 0.40 -0.0 215,740 - Ga0059261_0225 0.40 +0.3 215,740 - Ga0059261_0225 0.40 -0.3 215,740 - Ga0059261_0225 0.40 -0.5 215,740 - Ga0059261_0225 0.40 +0.1 215,899 - Ga0059261_0225 0.47 +0.3 215,980 - Ga0059261_0225 0.51 -0.3 216,069 + Ga0059261_0225 0.55 -1.2 216,069 + Ga0059261_0225 0.55 +0.5 216,070 - Ga0059261_0225 0.55 +1.0 216,276 + Ga0059261_0225 0.65 -0.6 216,277 - Ga0059261_0225 0.65 +0.6 216,277 - Ga0059261_0225 0.65 +1.6 216,277 - Ga0059261_0225 0.65 +0.4 216,414 + Ga0059261_0225 0.71 -0.4 216,414 + Ga0059261_0225 0.71 -0.5 216,414 + Ga0059261_0225 0.71 +0.6 216,415 - Ga0059261_0225 0.71 -1.3 216,975 + +0.6 216,976 - -1.1 216,976 - +0.6
Or see this region's nucleotide sequence