Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03759

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
3,928,289	-		CCNA_03758	0.13	+0.5
3,928,289	-		CCNA_03758	0.13	+0.2
3,928,289	-		CCNA_03758	0.13	-0.0
3,928,289	-		CCNA_03758	0.13	+1.1
3,928,313	+		CCNA_03758	0.15	+1.6
3,928,323	-		CCNA_03758	0.16	-0.3
3,928,340	+		CCNA_03758	0.18	+1.6
3,928,340	+		CCNA_03758	0.18	+1.3
3,928,348	-		CCNA_03758	0.18	-0.6
3,928,351	+		CCNA_03758	0.19	+1.0
3,928,359	-		CCNA_03758	0.19	-1.2
3,928,361	+		CCNA_03758	0.20	+1.5
3,928,361	+				+3.2
3,928,364	-		CCNA_03758	0.20	-1.4
3,928,364	-		CCNA_03758	0.20	-2.8
3,928,369	-		CCNA_03758	0.20	-0.6
3,928,377	+		CCNA_03758	0.21	+1.5
3,928,385	-		CCNA_03758	0.22	-0.6
3,928,394	+		CCNA_03758	0.22	+1.2
3,928,434	-		CCNA_03758	0.26	-1.4
3,928,445	-		CCNA_03758	0.27	-2.6
3,928,448	+		CCNA_03758	0.27	+1.1
3,928,488	+		CCNA_03758	0.30	+1.7
3,928,496	-		CCNA_03758	0.31	+1.8
3,928,531	+		CCNA_03758	0.34	+1.7
3,928,539	-		CCNA_03758	0.35	-0.4
3,928,602	+		CCNA_03758	0.40	+2.1
3,928,602	+		CCNA_03758	0.40	+1.5
3,928,602	+		CCNA_03758	0.40	+1.4
3,928,644	+		CCNA_03758	0.44	+1.3
3,928,673	+		CCNA_03758	0.46	+1.2
3,928,678	+		CCNA_03758	0.46	+1.4
3,928,691	-		CCNA_03758	0.47	+0.5
3,928,698	+		CCNA_03758	0.48	+1.8
3,928,705	+		CCNA_03758	0.49	+1.4
3,928,734	-		CCNA_03758	0.51	-1.7
3,928,736	+		CCNA_03758	0.51	+1.1
3,928,736	+		CCNA_03758	0.51	+2.2
3,928,765	+		CCNA_03758	0.54	+1.5
3,928,779	+		CCNA_03758	0.55	+1.2
3,928,779	+		CCNA_03758	0.55	+1.5
3,928,786	+		CCNA_03758	0.56	+1.7
3,928,792	+		CCNA_03758	0.56	+2.1
3,928,831	-		CCNA_03758	0.59	-0.1
3,928,859	+		CCNA_03758	0.62	+1.6
3,928,859	+		CCNA_03758	0.62	+0.8
3,928,859	+		CCNA_03758	0.62	+1.1
3,928,859	+		CCNA_03758	0.62	+1.7
3,928,859	+		CCNA_03758	0.62	+1.4
3,928,866	-		CCNA_03758	0.62	+0.1
3,928,867	-		CCNA_03758	0.62	-1.7
3,928,867	-		CCNA_03758	0.62	-2.7
3,928,867	-		CCNA_03758	0.62	-0.3
3,928,867	-		CCNA_03758	0.62	-1.7
3,928,867	-		CCNA_03758	0.62	+1.0
3,928,892	+		CCNA_03758	0.65	+0.7
3,928,902	+		CCNA_03758	0.65	+1.4
3,928,934	-		CCNA_03758	0.68	-1.2
3,928,951	+		CCNA_03758	0.70	+1.5
3,928,963	+		CCNA_03758	0.71	+1.7
3,928,971	-		CCNA_03758	0.71	+0.7
3,928,978	+		CCNA_03758	0.72	-0.1
3,928,986	-		CCNA_03758	0.73	+0.8
3,928,999	-		CCNA_03758	0.74	+0.2
3,929,044	+		CCNA_03758	0.77	+1.4
3,929,044	-		CCNA_03758	0.77	+1.2
3,929,044	-		CCNA_03758	0.77	+1.4
3,929,091	+		CCNA_03758	0.81	+1.5
3,929,099	+		CCNA_03758	0.82	+0.7
3,929,118	-		CCNA_03758	0.84	-0.1
3,929,141	+		CCNA_03758	0.86	+1.0
3,929,169	-		CCNA_03758	0.88	-0.1
3,929,202	+				+1.5
3,929,217	-				+0.1
3,929,219	+				+0.1
3,929,219	+				-0.4
3,929,227	-				+0.4
3,929,227	-				-1.8
3,929,227	-				-1.2
3,929,232	+				+3.2
3,929,245	-				-2.1
3,929,326	-				-0.0
3,929,331	-				-1.3
3,929,342	-				-0.1
3,929,348	-				-0.1
3,929,348	-				+1.3
3,929,367	-				-1.3
3,929,368	-				-0.6
3,929,378	+				+2.8
3,929,379	-				+1.6
3,929,386	-				+1.2
3,929,386	-				+0.6
3,929,397	+		CCNA_03759	0.11	-1.5
3,929,403	+		CCNA_03759	0.11	-2.3
3,929,470	+		CCNA_03759	0.18	+1.0
3,929,470	+		CCNA_03759	0.18	-1.1
3,929,488	-		CCNA_03759	0.20	+1.7
3,929,555	-		CCNA_03759	0.26	+2.2
3,929,579	-		CCNA_03759	0.29	-0.4
3,929,581	+		CCNA_03759	0.29	-1.1
3,929,617	+		CCNA_03759	0.32	-2.1
3,929,620	-		CCNA_03759	0.33	-0.4
3,929,658	-		CCNA_03759	0.36	-0.1
3,929,664	+		CCNA_03759	0.37	-2.2
3,929,672	-		CCNA_03759	0.38	-1.6
3,929,720	+		CCNA_03759	0.42	+0.5
3,929,757	+		CCNA_03759	0.46	-2.1
3,929,776	-		CCNA_03759	0.48	-0.6
3,929,785	+		CCNA_03759	0.49	-0.2
3,929,793	-		CCNA_03759	0.49	-0.9
3,929,795	+		CCNA_03759	0.50	-0.5
3,929,819	-		CCNA_03759	0.52	+0.7
3,929,819	-		CCNA_03759	0.52	-1.4
3,929,910	+		CCNA_03759	0.61	-2.6
3,929,911	-		CCNA_03759	0.61	+0.3
3,929,918	-		CCNA_03759	0.62	+0.1
3,929,918	-		CCNA_03759	0.62	-0.7
3,929,918	-		CCNA_03759	0.62	-0.3
3,929,952	-		CCNA_03759	0.65	-0.4
3,929,968	+		CCNA_03759	0.66	+0.6
3,929,969	+		CCNA_03759	0.66	-0.7
3,929,969	+		CCNA_03759	0.66	-2.2
3,929,969	+		CCNA_03759	0.66	-0.6
3,929,969	+		CCNA_03759	0.66	-1.1
3,929,974	+		CCNA_03759	0.67	-3.4
3,929,977	-		CCNA_03759	0.67	-0.0
3,929,977	-		CCNA_03759	0.67	+0.9
3,929,989	+		CCNA_03759	0.68	-0.7
3,930,001	-		CCNA_03759	0.70	+0.3
3,930,001	-		CCNA_03759	0.70	-0.7
3,930,002	-		CCNA_03759	0.70	+2.2
3,930,019	-		CCNA_03759	0.71	-1.1
3,930,035	+		CCNA_03759	0.73	-1.7
3,930,074	-		CCNA_03759	0.77	-1.3
3,930,098	+		CCNA_03759	0.79	-1.1
3,930,098	+		CCNA_03759	0.79	-1.8
3,930,106	-		CCNA_03759	0.80	-0.2
3,930,106	-		CCNA_03759	0.80	-0.9
3,930,106	-		CCNA_03759	0.80	-0.7
3,930,108	-		CCNA_03759	0.80	-1.9
3,930,163	-		CCNA_03759	0.85	-0.5
3,930,163	-		CCNA_03759	0.85	+1.0
3,930,178	-		CCNA_03759	0.87	-1.4
3,930,192	-		CCNA_03759	0.88	+1.8
3,930,213	+				-0.6
3,930,236	-				+0.4
3,930,251	+				-2.6
3,930,251	+				-0.1
3,930,251	+				-1.1
3,930,251	+				-0.8
3,930,251	+				-1.2
3,930,259	-				-0.4
3,930,259	-				+0.9
3,930,259	-				+0.8
3,930,259	-				-0.3
3,930,265	+				+1.9
3,930,281	+				+0.4
3,930,283	-				-0.0
3,930,298	+				+1.0
3,930,306	-				+0.7
3,930,306	-				+1.2
3,930,316	+				-0.8
3,930,323	-				-0.1
3,930,331	+				+0.0
3,930,339	-				+0.3
3,930,385	-				+0.1
3,930,434	+				+1.7
3,930,434	+				+1.5
3,930,441	-				+0.1
3,930,442	-				-0.5
3,930,442	-				+0.9
3,930,442	-				-0.1
3,930,442	-				+0.1
3,930,457	+				-0.6
3,930,457	+				-0.7
3,930,465	-				+0.4
3,930,502	+		CCNA_03760	0.10	-1.6
3,930,502	+		CCNA_03760	0.10	-0.7
3,930,504	+		CCNA_03760	0.11	+1.0
3,930,504	+		CCNA_03760	0.11	+0.9
3,930,509	+		CCNA_03760	0.12	-0.1
3,930,509	+		CCNA_03760	0.12	+1.2
3,930,509	+		CCNA_03760	0.12	-0.3
3,930,510	-		CCNA_03760	0.12	+0.8
3,930,512	-		CCNA_03760	0.12	-0.8
3,930,512	-		CCNA_03760	0.12	-0.2
3,930,516	+		CCNA_03760	0.13	+0.9
3,930,516	+		CCNA_03760	0.13	+1.8
3,930,517	+		CCNA_03760	0.13	-0.8
3,930,517	-		CCNA_03760	0.13	-0.8
3,930,517	-		CCNA_03760	0.13	-0.6
3,930,517	-		CCNA_03760	0.13	-0.1
3,930,522	+		CCNA_03760	0.14	+0.5
3,930,524	-		CCNA_03760	0.15	+3.1
3,930,524	-		CCNA_03760	0.15	+0.5
3,930,530	-				+0.7
3,930,560	+		CCNA_03760	0.22	+0.7
3,930,560	+		CCNA_03760	0.22	-0.5
3,930,560	+		CCNA_03760	0.22	+0.3
3,930,568	-		CCNA_03760	0.24	-1.4
3,930,568	-		CCNA_03760	0.24	-1.1
3,930,584	+		CCNA_03760	0.27	-0.4
3,930,624	+		CCNA_03760	0.35	+0.0
3,930,627	+		CCNA_03760	0.35	-0.0
3,930,670	-		CCNA_03760	0.44	+0.2
3,930,690	-		CCNA_03760	0.48	-0.4
3,930,717	+		CCNA_03760	0.53	+0.9
3,930,718	+				+1.9
3,930,750	-		CCNA_03760	0.60	+0.5
3,930,769	+		CCNA_03760	0.64	-1.1
3,930,774	+		CCNA_03760	0.65	+1.5
3,930,777	-		CCNA_03760	0.65	-0.8
3,930,782	-		CCNA_03760	0.66	-0.3
3,930,846	+		CCNA_03760	0.79	+0.9
3,930,846	+		CCNA_03760	0.79	+0.4
3,930,866	+		CCNA_03760	0.83	+0.5
3,930,876	-		CCNA_03760	0.85	+0.1
3,930,876	-		CCNA_03760	0.85	+1.0
3,930,887	+		CCNA_03760	0.87	-0.5
3,930,895	-		CCNA_03760	0.89	+0.2
3,930,908	-				-1.5
3,930,937	+				+1.5
3,930,977	+				+0.5
3,931,017	+		CCNA_03761	0.17	+1.4
3,931,020	-		CCNA_03761	0.17	-0.1
3,931,025	-		CCNA_03761	0.19	-0.6
3,931,069	-		CCNA_03761	0.29	-1.7
3,931,129	+		CCNA_03761	0.43	+1.0
3,931,141	+		CCNA_03761	0.46	+0.1
3,931,150	-		CCNA_03761	0.48	-0.5
3,931,207	+		CCNA_03761	0.62	-0.7
3,931,221	-		CCNA_03761	0.65	-0.5
3,931,240	-		CCNA_03761	0.70	-0.6
3,931,293	-		CCNA_03761	0.82	-0.3