Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24720

Experiment: R2A with copper (II) chloride 0.16 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with copper (II) chloride 0.16 mM
6,033,964	+				-0.1
6,034,036	+				-2.6
6,034,037	-				-1.1
6,034,037	-				+2.4
6,034,115	+				+0.4
6,034,116	-				-1.2
6,034,275	-				-0.1
6,034,283	-				-2.7
6,034,357	-				-1.4
6,034,359	+				-1.2
6,034,359	+				-0.9
6,034,441	+				-3.4
6,034,443	+				-1.4
6,034,461	-				-2.1
6,034,495	+				-1.0
6,034,496	-				-1.3
6,034,498	-				-2.1
6,034,573	-		CA265_RS24720	0.11	-2.6
6,034,620	-		CA265_RS24720	0.13	-3.0
6,034,736	-		CA265_RS24720	0.17	-3.7
6,034,738	+		CA265_RS24720	0.17	-3.1
6,034,839	+		CA265_RS24720	0.20	-1.2
6,034,840	-		CA265_RS24720	0.20	-2.2
6,034,843	+		CA265_RS24720	0.20	-0.5
6,034,843	+		CA265_RS24720	0.20	-0.9
6,034,843	+		CA265_RS24720	0.20	-0.3
6,034,858	-		CA265_RS24720	0.21	-2.3
6,034,876	+		CA265_RS24720	0.21	-0.2
6,034,910	-		CA265_RS24720	0.22	-2.4
6,034,954	-		CA265_RS24720	0.24	-0.8
6,035,012	+		CA265_RS24720	0.26	-2.1
6,035,012	+		CA265_RS24720	0.26	-2.5
6,035,136	-		CA265_RS24720	0.30	-2.0
6,035,162	-		CA265_RS24720	0.31	-0.8
6,035,213	+		CA265_RS24720	0.32	-2.6
6,035,218	-		CA265_RS24720	0.33	-1.8
6,035,218	-		CA265_RS24720	0.33	+0.7
6,035,219	-		CA265_RS24720	0.33	-0.6
6,035,286	+		CA265_RS24720	0.35	-2.9
6,035,287	-		CA265_RS24720	0.35	-0.3
6,035,296	+		CA265_RS24720	0.35	+2.0
6,035,320	+		CA265_RS24720	0.36	-1.2
6,035,321	-		CA265_RS24720	0.36	-2.4
6,035,324	+		CA265_RS24720	0.36	-1.5
6,035,375	-		CA265_RS24720	0.38	-1.6
6,035,375	-		CA265_RS24720	0.38	-1.2
6,035,397	-		CA265_RS24720	0.38	-2.2
6,035,397	-		CA265_RS24720	0.38	-1.7
6,035,428	-		CA265_RS24720	0.40	+0.5
6,035,428	-		CA265_RS24720	0.40	-1.2
6,035,432	+		CA265_RS24720	0.40	+1.5
6,035,559	-		CA265_RS24720	0.44	-2.6
6,035,637	+		CA265_RS24720	0.46	-2.4
6,035,643	+		CA265_RS24720	0.47	-0.3
6,035,687	+		CA265_RS24720	0.48	-2.2
6,035,687	+		CA265_RS24720	0.48	-0.6
6,035,688	-		CA265_RS24720	0.48	-3.6
6,035,688	-		CA265_RS24720	0.48	+0.0
6,035,715	-		CA265_RS24720	0.49	-2.4
6,035,717	+		CA265_RS24720	0.49	-1.8
6,035,773	+		CA265_RS24720	0.51	+2.2
6,035,774	-		CA265_RS24720	0.51	-1.5
6,035,811	+		CA265_RS24720	0.52	-2.8
6,035,812	-		CA265_RS24720	0.52	-2.2
6,035,818	+		CA265_RS24720	0.52	-0.6
6,035,854	+		CA265_RS24720	0.54	-1.4
6,035,882	-		CA265_RS24720	0.54	-0.6
6,035,974	-		CA265_RS24720	0.57	-2.0
6,035,974	-		CA265_RS24720	0.57	-3.2
6,035,979	+		CA265_RS24720	0.58	-0.1
6,035,980	-		CA265_RS24720	0.58	-1.2
6,036,045	-		CA265_RS24720	0.60	-2.6
6,036,080	-		CA265_RS24720	0.61	-2.3
6,036,097	+		CA265_RS24720	0.62	-2.7
6,036,097	+		CA265_RS24720	0.62	-4.1
6,036,097	+		CA265_RS24720	0.62	-2.7
6,036,098	-		CA265_RS24720	0.62	-2.2
6,036,098	-		CA265_RS24720	0.62	-0.7
6,036,113	-		CA265_RS24720	0.62	-1.9
6,036,156	+		CA265_RS24720	0.63	-1.6
6,036,197	+		CA265_RS24720	0.65	-3.4
6,036,198	-		CA265_RS24720	0.65	-3.6
6,036,217	+		CA265_RS24720	0.65	-2.5
6,036,220	-		CA265_RS24720	0.66	-1.5
6,036,276	-		CA265_RS24720	0.67	-2.5
6,036,296	-		CA265_RS24720	0.68	-2.2
6,036,396	-		CA265_RS24720	0.71	-4.8
6,036,396	-		CA265_RS24720	0.71	-3.6
6,036,462	-		CA265_RS24720	0.74	-1.4
6,036,521	+		CA265_RS24720	0.75	-1.8
6,036,522	-		CA265_RS24720	0.75	-1.2
6,036,531	+		CA265_RS24720	0.76	-2.4
6,036,532	-		CA265_RS24720	0.76	-1.6
6,036,532	-		CA265_RS24720	0.76	-1.1
6,036,532	-		CA265_RS24720	0.76	-2.0
6,036,562	+		CA265_RS24720	0.77	-1.2
6,036,563	-		CA265_RS24720	0.77	-0.6
6,036,563	-		CA265_RS24720	0.77	-2.2
6,036,563	-		CA265_RS24720	0.77	-1.8
6,036,588	-		CA265_RS24720	0.78	-4.4
6,036,588	-		CA265_RS24720	0.78	+1.7
6,036,613	+		CA265_RS24720	0.78	-2.3
6,036,690	-		CA265_RS24720	0.81	-1.9
6,036,722	-		CA265_RS24720	0.82	-1.6
6,036,723	+		CA265_RS24720	0.82	-2.4
6,036,723	+		CA265_RS24720	0.82	-2.1
6,036,781	+		CA265_RS24720	0.84	-0.1
6,036,781	+		CA265_RS24720	0.84	-1.6
6,036,782	-		CA265_RS24720	0.84	-1.9
6,036,907	+		CA265_RS24720	0.88	-1.0
6,036,933	-		CA265_RS24720	0.89	-3.1
6,036,990	-				-3.3
6,036,992	+				+0.0
6,037,028	+				-0.3
6,037,029	-				-2.5
6,037,098	-				-2.3
6,037,204	-				-0.4
6,037,209	-				-2.5
6,037,209	-				-3.7
6,037,242	-				-1.1
6,037,242	-				-2.1
6,037,244	-				+1.0
6,037,244	-				-1.4
6,037,331	-				-1.5
6,037,397	-				+2.7
6,037,411	+				-1.2
6,037,414	-				+2.3
6,037,463	-				+0.0
6,037,505	-				-0.7
6,037,513	+				-1.0
6,037,568	+				+0.0
6,037,569	-				-3.1
6,037,569	-				+0.0
6,037,569	-				-2.8
6,037,599	+				-1.0
6,037,609	-				-0.7
6,037,635	-				+1.5
6,037,736	+				+1.2
6,037,746	-				-0.9
6,037,762	-				-3.3
6,037,891	+		CA265_RS24725	0.13	-0.3
6,037,892	-				+0.0
6,037,966	-		CA265_RS24725	0.16	-0.3
6,037,966	-		CA265_RS24725	0.16	+1.9
6,037,977	-		CA265_RS24725	0.16	-0.8
6,037,987	-		CA265_RS24725	0.17	-0.2
6,038,052	-		CA265_RS24725	0.19	+0.2
6,038,150	-		CA265_RS24725	0.22	+0.4
6,038,152	+		CA265_RS24725	0.22	-2.1
6,038,152	+		CA265_RS24725	0.22	+0.2
6,038,152	+		CA265_RS24725	0.22	+1.0
6,038,171	+		CA265_RS24725	0.23	+0.6
6,038,172	-		CA265_RS24725	0.23	+0.5
6,038,255	+		CA265_RS24725	0.25	-1.7