Experiment: R2A with copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02070 and CA265_RS02075 are separated by 474 nucleotides CA265_RS02075 and CA265_RS02080 overlap by 1 nucleotides
CA265_RS02070: CA265_RS02070 - tyrosine--tRNA ligase, at 523,708 to 524,994
_RS02070
CA265_RS02075: CA265_RS02075 - hypothetical protein, at 525,469 to 526,266
_RS02075
CA265_RS02080: CA265_RS02080 - hypothetical protein, at 526,266 to 526,505
_RS02080
Position (kb) 525
526
527 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 525.017 kb on - strand at 525.055 kb on + strand at 525.055 kb on + strand at 525.126 kb on + strand at 525.174 kb on + strand at 525.203 kb on + strand at 525.289 kb on + strand at 525.289 kb on + strand at 525.290 kb on - strand at 525.290 kb on - strand at 525.298 kb on + strand at 525.323 kb on + strand at 525.345 kb on + strand at 525.346 kb on - strand at 525.470 kb on + strand at 525.616 kb on + strand, within CA265_RS02075 at 525.630 kb on + strand, within CA265_RS02075 at 525.630 kb on + strand, within CA265_RS02075 at 525.630 kb on + strand, within CA265_RS02075 at 525.702 kb on + strand, within CA265_RS02075 at 525.763 kb on + strand, within CA265_RS02075 at 525.874 kb on + strand, within CA265_RS02075 at 525.970 kb on - strand, within CA265_RS02075 at 525.999 kb on - strand, within CA265_RS02075 at 526.036 kb on + strand, within CA265_RS02075 at 526.078 kb on + strand, within CA265_RS02075 at 526.100 kb on - strand, within CA265_RS02075 at 526.100 kb on - strand, within CA265_RS02075 at 526.112 kb on + strand, within CA265_RS02075 at 526.112 kb on + strand, within CA265_RS02075 at 526.126 kb on - strand, within CA265_RS02075 at 526.132 kb on + strand, within CA265_RS02075 at 526.148 kb on + strand, within CA265_RS02075 at 526.149 kb on - strand, within CA265_RS02075 at 526.149 kb on - strand, within CA265_RS02075 at 526.206 kb on + strand at 526.207 kb on - strand at 526.207 kb on - strand at 526.217 kb on - strand at 526.260 kb on + strand at 526.280 kb on + strand at 526.281 kb on - strand at 526.368 kb on + strand, within CA265_RS02080 at 526.485 kb on + strand at 526.486 kb on - strand at 526.516 kb on + strand at 526.523 kb on - strand at 526.548 kb on - strand at 526.567 kb on + strand at 526.582 kb on - strand at 526.582 kb on - strand at 526.608 kb on + strand at 526.609 kb on - strand at 526.638 kb on + strand at 526.638 kb on + strand at 526.638 kb on + strand at 526.639 kb on - strand at 526.639 kb on - strand at 526.639 kb on - strand at 526.659 kb on - strand at 526.666 kb on + strand at 526.764 kb on - strand at 526.835 kb on - strand at 526.835 kb on - strand at 526.846 kb on + strand at 526.847 kb on - strand at 526.875 kb on - strand at 526.907 kb on - strand at 526.910 kb on + strand at 526.910 kb on + strand at 526.910 kb on + strand at 526.934 kb on - strand at 527.077 kb on + strand at 527.086 kb on + strand at 527.146 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with copper (II) chloride 0.16 mM remove 525,017 - +0.2 525,055 + -3.1 525,055 + -1.1 525,126 + +2.5 525,174 + +1.2 525,203 + -2.4 525,289 + +1.1 525,289 + +1.1 525,290 - +0.7 525,290 - +1.0 525,298 + -0.5 525,323 + +0.4 525,345 + -0.4 525,346 - +0.2 525,470 + -2.5 525,616 + CA265_RS02075 0.18 -1.7 525,630 + CA265_RS02075 0.20 -1.0 525,630 + CA265_RS02075 0.20 -0.7 525,630 + CA265_RS02075 0.20 -1.8 525,702 + CA265_RS02075 0.29 -1.6 525,763 + CA265_RS02075 0.37 +0.5 525,874 + CA265_RS02075 0.51 +1.4 525,970 - CA265_RS02075 0.63 +0.1 525,999 - CA265_RS02075 0.66 -0.1 526,036 + CA265_RS02075 0.71 -0.2 526,078 + CA265_RS02075 0.76 +1.2 526,100 - CA265_RS02075 0.79 +1.3 526,100 - CA265_RS02075 0.79 +1.4 526,112 + CA265_RS02075 0.81 +1.0 526,112 + CA265_RS02075 0.81 +0.5 526,126 - CA265_RS02075 0.82 +0.7 526,132 + CA265_RS02075 0.83 +0.6 526,148 + CA265_RS02075 0.85 +0.9 526,149 - CA265_RS02075 0.85 +1.6 526,149 - CA265_RS02075 0.85 +0.9 526,206 + +1.7 526,207 - +0.9 526,207 - -0.1 526,217 - +1.0 526,260 + -3.0 526,280 + +0.3 526,281 - -0.5 526,368 + CA265_RS02080 0.42 -1.1 526,485 + +1.7 526,486 - -0.5 526,516 + -0.3 526,523 - -0.1 526,548 - +1.3 526,567 + +0.9 526,582 - +2.3 526,582 - -0.6 526,608 + +1.0 526,609 - +0.3 526,638 + +0.6 526,638 + +0.1 526,638 + +0.3 526,639 - +0.5 526,639 - -0.1 526,639 - -0.3 526,659 - +0.7 526,666 + +1.0 526,764 - -1.7 526,835 - +0.7 526,835 - -1.3 526,846 + +1.8 526,847 - +0.3 526,875 - +0.3 526,907 - -1.7 526,910 + +1.0 526,910 + +0.8 526,910 + -0.1 526,934 - -1.8 527,077 + -0.3 527,086 + +1.0 527,146 + +1.7
Or see this region's nucleotide sequence