Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27390 and AO356_27395 are separated by 29 nucleotides AO356_27395 and AO356_27400 are separated by 150 nucleotides AO356_27400 and AO356_27405 are separated by 102 nucleotides AO356_27405 and AO356_27410 are separated by 18 nucleotides
AO356_27390: AO356_27390 - ATPase, at 6,241,647 to 6,242,996
_27390
AO356_27395: AO356_27395 - chemotaxis protein CheY, at 6,243,026 to 6,243,790
_27395
AO356_27400: AO356_27400 - 1,2-oxophytodienoate reductase, at 6,243,941 to 6,245,059
_27400
AO356_27405: AO356_27405 - MarR family transcriptional regulator, at 6,245,162 to 6,245,545
_27405
AO356_27410: AO356_27410 - TonB-dependent receptor, at 6,245,564 to 6,247,756
_27410
Position (kb)
6243
6244
6245
6246 Strain fitness (log2 ratio)
-2
-1
0
1 at 6243.422 kb on + strand, within AO356_27395 at 6243.423 kb on - strand, within AO356_27395 at 6243.474 kb on + strand, within AO356_27395 at 6243.829 kb on + strand at 6243.957 kb on - strand at 6244.046 kb on + strand at 6244.078 kb on + strand, within AO356_27400 at 6244.360 kb on - strand, within AO356_27400 at 6244.720 kb on - strand, within AO356_27400 at 6244.923 kb on + strand, within AO356_27400 at 6244.948 kb on + strand at 6245.033 kb on + strand at 6245.033 kb on + strand at 6245.034 kb on - strand at 6245.034 kb on - strand at 6245.093 kb on - strand at 6245.093 kb on - strand at 6245.129 kb on + strand at 6245.143 kb on + strand at 6245.144 kb on - strand at 6245.145 kb on + strand at 6245.146 kb on - strand at 6245.146 kb on - strand at 6245.146 kb on - strand at 6245.146 kb on - strand at 6245.146 kb on - strand at 6245.146 kb on - strand at 6245.146 kb on - strand at 6245.234 kb on - strand, within AO356_27405 at 6245.285 kb on - strand, within AO356_27405 at 6245.408 kb on + strand, within AO356_27405 at 6245.566 kb on - strand at 6245.573 kb on - strand at 6245.575 kb on - strand at 6245.621 kb on - strand at 6245.646 kb on + strand at 6245.706 kb on + strand at 6245.765 kb on - strand at 6245.835 kb on - strand, within AO356_27410 at 6245.934 kb on + strand, within AO356_27410 at 6245.935 kb on - strand, within AO356_27410 at 6245.935 kb on - strand, within AO356_27410 at 6245.948 kb on - strand, within AO356_27410 at 6245.993 kb on - strand, within AO356_27410 at 6245.993 kb on - strand, within AO356_27410 at 6245.995 kb on + strand, within AO356_27410 at 6245.996 kb on - strand, within AO356_27410 at 6246.013 kb on - strand, within AO356_27410 at 6246.034 kb on + strand, within AO356_27410
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 6,243,422 + AO356_27395 0.52 +0.1 6,243,423 - AO356_27395 0.52 -1.4 6,243,474 + AO356_27395 0.59 -0.6 6,243,829 + -1.8 6,243,957 - +0.4 6,244,046 + +0.8 6,244,078 + AO356_27400 0.12 -1.0 6,244,360 - AO356_27400 0.37 +0.1 6,244,720 - AO356_27400 0.70 -1.2 6,244,923 + AO356_27400 0.88 +0.0 6,244,948 + +0.5 6,245,033 + +0.3 6,245,033 + +0.4 6,245,034 - +1.5 6,245,034 - +1.3 6,245,093 - -0.1 6,245,093 - -0.8 6,245,129 + -0.4 6,245,143 + -0.1 6,245,144 - -0.2 6,245,145 + +0.1 6,245,146 - -0.0 6,245,146 - +0.0 6,245,146 - -0.4 6,245,146 - -0.5 6,245,146 - -0.5 6,245,146 - -0.2 6,245,146 - +0.6 6,245,234 - AO356_27405 0.19 +0.9 6,245,285 - AO356_27405 0.32 -0.2 6,245,408 + AO356_27405 0.64 +0.6 6,245,566 - +0.7 6,245,573 - +0.4 6,245,575 - +0.6 6,245,621 - +0.7 6,245,646 + -0.5 6,245,706 + +1.0 6,245,765 - -0.1 6,245,835 - AO356_27410 0.12 +0.1 6,245,934 + AO356_27410 0.17 +0.9 6,245,935 - AO356_27410 0.17 +1.0 6,245,935 - AO356_27410 0.17 -0.9 6,245,948 - AO356_27410 0.18 -0.5 6,245,993 - AO356_27410 0.20 -1.3 6,245,993 - AO356_27410 0.20 -1.3 6,245,995 + AO356_27410 0.20 +0.6 6,245,996 - AO356_27410 0.20 +1.0 6,246,013 - AO356_27410 0.20 +0.3 6,246,034 + AO356_27410 0.21 -0.4
Or see this region's nucleotide sequence