Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21090 and AO356_21095 are separated by 143 nucleotides AO356_21095 and AO356_21100 are separated by 291 nucleotides
AO356_21090: AO356_21090 - trans-aconitate methyltransferase, at 4,693,705 to 4,694,475
_21090
AO356_21095: AO356_21095 - thioesterase, at 4,694,619 to 4,695,353
_21095
AO356_21100: AO356_21100 - non-ribosomal peptide synthetase, at 4,695,645 to 4,708,196
_21100
Position (kb)
4694
4695
4696 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4693.641 kb on + strand at 4693.641 kb on + strand at 4693.642 kb on - strand at 4693.648 kb on + strand at 4693.648 kb on + strand at 4693.796 kb on + strand, within AO356_21090 at 4693.797 kb on - strand, within AO356_21090 at 4693.914 kb on - strand, within AO356_21090 at 4693.914 kb on - strand, within AO356_21090 at 4693.965 kb on - strand, within AO356_21090 at 4693.965 kb on - strand, within AO356_21090 at 4693.967 kb on + strand, within AO356_21090 at 4693.968 kb on - strand, within AO356_21090 at 4693.968 kb on - strand, within AO356_21090 at 4693.968 kb on - strand, within AO356_21090 at 4694.430 kb on + strand at 4694.430 kb on + strand at 4694.430 kb on + strand at 4694.430 kb on + strand at 4694.430 kb on + strand at 4694.453 kb on + strand at 4694.453 kb on + strand at 4694.453 kb on + strand at 4694.454 kb on - strand at 4694.454 kb on - strand at 4694.454 kb on - strand at 4694.515 kb on + strand at 4694.516 kb on - strand at 4694.516 kb on - strand at 4694.517 kb on + strand at 4694.518 kb on - strand at 4694.547 kb on + strand at 4694.574 kb on - strand at 4694.808 kb on + strand, within AO356_21095 at 4695.804 kb on + strand at 4695.804 kb on + strand at 4695.858 kb on + strand at 4695.858 kb on + strand at 4695.859 kb on - strand at 4696.222 kb on + strand at 4696.223 kb on - strand at 4696.249 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 4,693,641 + +0.3 4,693,641 + -0.1 4,693,642 - +0.2 4,693,648 + +0.2 4,693,648 + -0.3 4,693,796 + AO356_21090 0.12 -0.2 4,693,797 - AO356_21090 0.12 -0.2 4,693,914 - AO356_21090 0.27 +0.3 4,693,914 - AO356_21090 0.27 -0.0 4,693,965 - AO356_21090 0.34 -1.6 4,693,965 - AO356_21090 0.34 -1.9 4,693,967 + AO356_21090 0.34 +0.6 4,693,968 - AO356_21090 0.34 -0.0 4,693,968 - AO356_21090 0.34 -1.7 4,693,968 - AO356_21090 0.34 +0.1 4,694,430 + +2.3 4,694,430 + +0.3 4,694,430 + +0.2 4,694,430 + +1.0 4,694,430 + -0.8 4,694,453 + -0.6 4,694,453 + -0.7 4,694,453 + +0.1 4,694,454 - +0.3 4,694,454 - -1.9 4,694,454 - +0.5 4,694,515 + -0.2 4,694,516 - -0.7 4,694,516 - -0.1 4,694,517 + +0.0 4,694,518 - +0.0 4,694,547 + +0.5 4,694,574 - -0.5 4,694,808 + AO356_21095 0.26 -0.6 4,695,804 + -0.2 4,695,804 + -0.6 4,695,858 + +0.9 4,695,858 + +1.0 4,695,859 - +0.1 4,696,222 + -1.0 4,696,223 - -0.8 4,696,249 - -0.4
Or see this region's nucleotide sequence