Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19140 and AO356_19145 overlap by 4 nucleotides AO356_19145 and AO356_19150 overlap by 4 nucleotides AO356_19150 and AO356_19155 overlap by 8 nucleotides
AO356_19140: AO356_19140 - cobyrinic acid a,c-diamide synthase, at 4,298,404 to 4,299,798
_19140
AO356_19145: AO356_19145 - 5,6-dimethylbenzimidazole synthase, at 4,299,795 to 4,300,445
_19145
AO356_19150: AO356_19150 - cobalamin biosynthesis protein CobD, at 4,300,442 to 4,301,350
_19150
AO356_19155: AO356_19155 - threonine-phosphate decarboxylase, at 4,301,343 to 4,302,335
_19155
Position (kb)
4299
4300
4301 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4298.929 kb on + strand, within AO356_19140 at 4298.929 kb on + strand, within AO356_19140 at 4299.051 kb on + strand, within AO356_19140 at 4299.051 kb on + strand, within AO356_19140 at 4299.052 kb on - strand, within AO356_19140 at 4299.052 kb on - strand, within AO356_19140 at 4299.173 kb on - strand, within AO356_19140 at 4299.268 kb on + strand, within AO356_19140 at 4299.268 kb on + strand, within AO356_19140 at 4299.268 kb on + strand, within AO356_19140 at 4299.268 kb on + strand, within AO356_19140 at 4299.268 kb on + strand, within AO356_19140 at 4299.268 kb on + strand, within AO356_19140 at 4299.319 kb on - strand, within AO356_19140 at 4299.394 kb on + strand, within AO356_19140 at 4299.394 kb on + strand, within AO356_19140 at 4299.394 kb on + strand, within AO356_19140 at 4299.395 kb on - strand, within AO356_19140 at 4299.395 kb on - strand, within AO356_19140 at 4299.395 kb on - strand, within AO356_19140 at 4299.395 kb on - strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.541 kb on + strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.542 kb on - strand, within AO356_19140 at 4299.592 kb on - strand, within AO356_19140 at 4299.652 kb on + strand, within AO356_19140 at 4299.652 kb on + strand, within AO356_19140 at 4299.652 kb on + strand, within AO356_19140 at 4299.652 kb on + strand, within AO356_19140 at 4299.653 kb on - strand, within AO356_19140 at 4299.653 kb on - strand, within AO356_19140 at 4299.653 kb on - strand, within AO356_19140 at 4299.653 kb on - strand, within AO356_19140 at 4299.653 kb on - strand, within AO356_19140 at 4299.653 kb on - strand, within AO356_19140 at 4299.653 kb on - strand, within AO356_19140 at 4299.653 kb on - strand, within AO356_19140 at 4299.838 kb on - strand at 4299.890 kb on - strand, within AO356_19145 at 4300.353 kb on + strand, within AO356_19145 at 4300.353 kb on + strand, within AO356_19145 at 4300.416 kb on + strand at 4300.417 kb on - strand at 4300.417 kb on - strand at 4300.694 kb on + strand, within AO356_19150 at 4300.694 kb on + strand, within AO356_19150 at 4300.694 kb on + strand, within AO356_19150 at 4300.694 kb on + strand, within AO356_19150 at 4300.694 kb on + strand, within AO356_19150 at 4300.695 kb on - strand, within AO356_19150 at 4300.695 kb on - strand, within AO356_19150 at 4300.695 kb on - strand, within AO356_19150 at 4300.938 kb on - strand, within AO356_19150 at 4300.952 kb on - strand, within AO356_19150 at 4301.036 kb on + strand, within AO356_19150 at 4301.036 kb on + strand, within AO356_19150 at 4301.037 kb on - strand, within AO356_19150 at 4301.037 kb on - strand, within AO356_19150 at 4301.037 kb on - strand, within AO356_19150 at 4301.037 kb on - strand, within AO356_19150 at 4301.037 kb on - strand, within AO356_19150 at 4301.066 kb on + strand, within AO356_19150 at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.342 kb on + strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.343 kb on - strand at 4301.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 4,298,929 + AO356_19140 0.38 -1.0 4,298,929 + AO356_19140 0.38 -0.6 4,299,051 + AO356_19140 0.46 -1.3 4,299,051 + AO356_19140 0.46 +0.1 4,299,052 - AO356_19140 0.46 -1.7 4,299,052 - AO356_19140 0.46 -1.4 4,299,173 - AO356_19140 0.55 -0.3 4,299,268 + AO356_19140 0.62 -0.8 4,299,268 + AO356_19140 0.62 -0.4 4,299,268 + AO356_19140 0.62 -0.3 4,299,268 + AO356_19140 0.62 +0.4 4,299,268 + AO356_19140 0.62 -0.1 4,299,268 + AO356_19140 0.62 -0.9 4,299,319 - AO356_19140 0.66 +0.7 4,299,394 + AO356_19140 0.71 +0.3 4,299,394 + AO356_19140 0.71 +0.6 4,299,394 + AO356_19140 0.71 +0.2 4,299,395 - AO356_19140 0.71 +0.0 4,299,395 - AO356_19140 0.71 -1.6 4,299,395 - AO356_19140 0.71 -1.3 4,299,395 - AO356_19140 0.71 -0.2 4,299,541 + AO356_19140 0.82 -0.4 4,299,541 + AO356_19140 0.82 -2.3 4,299,541 + AO356_19140 0.82 +0.5 4,299,541 + AO356_19140 0.82 -0.0 4,299,541 + AO356_19140 0.82 -0.4 4,299,541 + AO356_19140 0.82 -1.1 4,299,541 + AO356_19140 0.82 +0.9 4,299,541 + AO356_19140 0.82 -0.4 4,299,541 + AO356_19140 0.82 -0.4 4,299,541 + AO356_19140 0.82 -0.6 4,299,541 + AO356_19140 0.82 -0.2 4,299,542 - AO356_19140 0.82 -0.9 4,299,542 - AO356_19140 0.82 -0.1 4,299,542 - AO356_19140 0.82 -0.6 4,299,542 - AO356_19140 0.82 +0.7 4,299,542 - AO356_19140 0.82 +0.4 4,299,542 - AO356_19140 0.82 +0.1 4,299,542 - AO356_19140 0.82 -1.2 4,299,542 - AO356_19140 0.82 -1.1 4,299,542 - AO356_19140 0.82 -0.9 4,299,542 - AO356_19140 0.82 -0.3 4,299,542 - AO356_19140 0.82 +1.4 4,299,542 - AO356_19140 0.82 +0.4 4,299,542 - AO356_19140 0.82 +0.6 4,299,592 - AO356_19140 0.85 -0.4 4,299,652 + AO356_19140 0.89 -0.5 4,299,652 + AO356_19140 0.89 +0.8 4,299,652 + AO356_19140 0.89 -1.9 4,299,652 + AO356_19140 0.89 -0.6 4,299,653 - AO356_19140 0.90 -0.5 4,299,653 - AO356_19140 0.90 -0.4 4,299,653 - AO356_19140 0.90 -0.5 4,299,653 - AO356_19140 0.90 -0.7 4,299,653 - AO356_19140 0.90 -1.6 4,299,653 - AO356_19140 0.90 -0.4 4,299,653 - AO356_19140 0.90 -0.4 4,299,653 - AO356_19140 0.90 -0.4 4,299,838 - +0.0 4,299,890 - AO356_19145 0.15 -0.7 4,300,353 + AO356_19145 0.86 -1.3 4,300,353 + AO356_19145 0.86 -0.3 4,300,416 + -0.9 4,300,417 - +0.9 4,300,417 - -0.8 4,300,694 + AO356_19150 0.28 -0.3 4,300,694 + AO356_19150 0.28 -0.7 4,300,694 + AO356_19150 0.28 -1.0 4,300,694 + AO356_19150 0.28 +1.0 4,300,694 + AO356_19150 0.28 +0.1 4,300,695 - AO356_19150 0.28 -1.1 4,300,695 - AO356_19150 0.28 +0.1 4,300,695 - AO356_19150 0.28 -0.7 4,300,938 - AO356_19150 0.55 -2.1 4,300,952 - AO356_19150 0.56 +1.4 4,301,036 + AO356_19150 0.65 +0.4 4,301,036 + AO356_19150 0.65 +0.4 4,301,037 - AO356_19150 0.65 +0.1 4,301,037 - AO356_19150 0.65 -2.5 4,301,037 - AO356_19150 0.65 -0.1 4,301,037 - AO356_19150 0.65 -0.3 4,301,037 - AO356_19150 0.65 -1.2 4,301,066 + AO356_19150 0.69 -3.6 4,301,342 + +0.4 4,301,342 + -0.2 4,301,342 + -1.2 4,301,342 + -1.4 4,301,342 + +0.4 4,301,342 + +0.7 4,301,342 + -1.1 4,301,342 + +0.5 4,301,342 + +0.1 4,301,343 - +0.6 4,301,343 - +0.4 4,301,343 - -1.0 4,301,343 - +0.4 4,301,343 - -2.9 4,301,343 - +0.4
Or see this region's nucleotide sequence