Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18015 and AO356_18020 are separated by 114 nucleotides AO356_18020 and AO356_18025 are separated by 0 nucleotides AO356_18025 and AO356_18030 are separated by 127 nucleotides AO356_18030 and AO356_18035 overlap by 11 nucleotides
AO356_18015: AO356_18015 - crossover junction endodeoxyribonuclease RuvC, at 4,064,508 to 4,065,032
_18015
AO356_18020: AO356_18020 - ATP-dependent DNA helicase RuvA, at 4,065,147 to 4,065,755
_18020
AO356_18025: AO356_18025 - ATP-dependent DNA helicase RuvB, at 4,065,756 to 4,066,817
_18025
AO356_18030: AO356_18030 - 4-hydroxybenzoyl-CoA thioesterase, at 4,066,945 to 4,067,412
_18030
AO356_18035: AO356_18035 - protein TolQ, at 4,067,402 to 4,068,097
_18035
Position (kb)
4065
4066
4067 Strain fitness (log2 ratio)
-2
-1
0
1 at 4065.033 kb on + strand at 4065.034 kb on - strand at 4065.103 kb on + strand at 4065.208 kb on + strand, within AO356_18020 at 4065.222 kb on + strand, within AO356_18020 at 4065.222 kb on + strand, within AO356_18020 at 4065.322 kb on + strand, within AO356_18020 at 4065.322 kb on + strand, within AO356_18020 at 4065.322 kb on + strand, within AO356_18020 at 4065.322 kb on + strand, within AO356_18020 at 4065.323 kb on - strand, within AO356_18020 at 4065.657 kb on + strand, within AO356_18020 at 4065.658 kb on - strand, within AO356_18020 at 4065.753 kb on + strand at 4065.753 kb on + strand at 4065.754 kb on - strand at 4065.852 kb on + strand at 4066.087 kb on + strand, within AO356_18025 at 4066.311 kb on + strand, within AO356_18025 at 4066.390 kb on - strand, within AO356_18025 at 4066.390 kb on - strand, within AO356_18025 at 4066.690 kb on - strand, within AO356_18025 at 4066.734 kb on + strand at 4066.734 kb on + strand at 4066.734 kb on + strand at 4066.735 kb on - strand at 4066.735 kb on - strand at 4066.750 kb on + strand at 4066.751 kb on - strand at 4066.786 kb on + strand at 4066.828 kb on + strand at 4066.829 kb on - strand at 4066.829 kb on - strand at 4066.932 kb on + strand at 4066.932 kb on + strand at 4066.932 kb on + strand at 4066.932 kb on + strand at 4066.932 kb on + strand at 4066.939 kb on + strand at 4066.939 kb on + strand at 4066.939 kb on + strand at 4066.939 kb on + strand at 4066.939 kb on + strand at 4066.939 kb on + strand at 4066.944 kb on + strand at 4066.944 kb on + strand at 4066.944 kb on + strand at 4067.026 kb on + strand, within AO356_18030 at 4067.026 kb on + strand, within AO356_18030 at 4067.026 kb on + strand, within AO356_18030 at 4067.026 kb on + strand, within AO356_18030 at 4067.026 kb on + strand, within AO356_18030 at 4067.026 kb on + strand, within AO356_18030 at 4067.038 kb on + strand, within AO356_18030 at 4067.038 kb on + strand, within AO356_18030 at 4067.038 kb on + strand, within AO356_18030 at 4067.049 kb on + strand, within AO356_18030 at 4067.123 kb on + strand, within AO356_18030 at 4067.123 kb on + strand, within AO356_18030 at 4067.189 kb on + strand, within AO356_18030 at 4067.189 kb on + strand, within AO356_18030 at 4067.189 kb on + strand, within AO356_18030 at 4067.189 kb on + strand, within AO356_18030 at 4067.189 kb on + strand, within AO356_18030 at 4067.189 kb on + strand, within AO356_18030 at 4067.253 kb on + strand, within AO356_18030 at 4067.310 kb on + strand, within AO356_18030 at 4067.310 kb on + strand, within AO356_18030 at 4067.310 kb on + strand, within AO356_18030 at 4067.310 kb on + strand, within AO356_18030 at 4067.310 kb on + strand, within AO356_18030 at 4067.342 kb on + strand, within AO356_18030
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 4,065,033 + -0.2 4,065,034 - -1.3 4,065,103 + -0.9 4,065,208 + AO356_18020 0.10 -2.2 4,065,222 + AO356_18020 0.12 -1.9 4,065,222 + AO356_18020 0.12 -1.6 4,065,322 + AO356_18020 0.29 -0.8 4,065,322 + AO356_18020 0.29 -2.3 4,065,322 + AO356_18020 0.29 -1.6 4,065,322 + AO356_18020 0.29 -1.2 4,065,323 - AO356_18020 0.29 -1.4 4,065,657 + AO356_18020 0.84 -1.2 4,065,658 - AO356_18020 0.84 -0.4 4,065,753 + -0.4 4,065,753 + -0.2 4,065,754 - +0.4 4,065,852 + -0.2 4,066,087 + AO356_18025 0.31 -0.6 4,066,311 + AO356_18025 0.52 -2.6 4,066,390 - AO356_18025 0.60 -1.2 4,066,390 - AO356_18025 0.60 +0.1 4,066,690 - AO356_18025 0.88 -1.6 4,066,734 + -1.9 4,066,734 + -1.6 4,066,734 + -2.1 4,066,735 - -1.4 4,066,735 - -0.2 4,066,750 + -0.4 4,066,751 - -1.2 4,066,786 + +0.5 4,066,828 + +0.7 4,066,829 - -1.4 4,066,829 - -2.7 4,066,932 + +0.3 4,066,932 + +1.4 4,066,932 + +1.4 4,066,932 + -0.2 4,066,932 + +0.1 4,066,939 + +0.3 4,066,939 + +0.2 4,066,939 + +0.8 4,066,939 + +0.3 4,066,939 + -0.7 4,066,939 + -1.5 4,066,944 + -0.9 4,066,944 + +0.6 4,066,944 + -0.8 4,067,026 + AO356_18030 0.17 -0.9 4,067,026 + AO356_18030 0.17 -0.4 4,067,026 + AO356_18030 0.17 +0.0 4,067,026 + AO356_18030 0.17 +0.1 4,067,026 + AO356_18030 0.17 +0.1 4,067,026 + AO356_18030 0.17 -0.1 4,067,038 + AO356_18030 0.20 +0.8 4,067,038 + AO356_18030 0.20 -0.4 4,067,038 + AO356_18030 0.20 -0.1 4,067,049 + AO356_18030 0.22 +0.6 4,067,123 + AO356_18030 0.38 -0.1 4,067,123 + AO356_18030 0.38 +0.2 4,067,189 + AO356_18030 0.52 +0.4 4,067,189 + AO356_18030 0.52 +0.2 4,067,189 + AO356_18030 0.52 +1.0 4,067,189 + AO356_18030 0.52 -0.3 4,067,189 + AO356_18030 0.52 -0.8 4,067,189 + AO356_18030 0.52 -0.9 4,067,253 + AO356_18030 0.66 -0.1 4,067,310 + AO356_18030 0.78 -0.5 4,067,310 + AO356_18030 0.78 -0.6 4,067,310 + AO356_18030 0.78 -0.4 4,067,310 + AO356_18030 0.78 -0.7 4,067,310 + AO356_18030 0.78 +0.1 4,067,342 + AO356_18030 0.85 -0.1
Or see this region's nucleotide sequence