Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17810 and AO356_17815 are separated by 452 nucleotides AO356_17815 and AO356_17820 overlap by 8 nucleotides AO356_17820 and AO356_17825 are separated by 28 nucleotides
AO356_17810: AO356_17810 - fumarate hydratase, at 4,018,060 to 4,019,583
_17810
AO356_17815: AO356_17815 - hypothetical protein, at 4,020,036 to 4,021,142
_17815
AO356_17820: AO356_17820 - hypothetical protein, at 4,021,135 to 4,022,070
_17820
AO356_17825: AO356_17825 - enoyl-CoA hydratase, at 4,022,099 to 4,022,848
_17825
Position (kb)
4020
4021
4022 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4019.519 kb on + strand at 4019.620 kb on - strand at 4019.620 kb on - strand at 4019.664 kb on + strand at 4019.665 kb on - strand at 4019.665 kb on - strand at 4019.665 kb on - strand at 4019.697 kb on - strand at 4019.713 kb on - strand at 4019.713 kb on - strand at 4019.714 kb on + strand at 4019.715 kb on - strand at 4019.746 kb on + strand at 4019.747 kb on - strand at 4019.747 kb on - strand at 4019.828 kb on - strand at 4019.861 kb on + strand at 4019.862 kb on - strand at 4019.862 kb on - strand at 4019.862 kb on - strand at 4019.888 kb on - strand at 4019.959 kb on - strand at 4019.959 kb on - strand at 4019.968 kb on + strand at 4019.993 kb on - strand at 4019.993 kb on - strand at 4019.993 kb on - strand at 4020.096 kb on + strand at 4020.144 kb on + strand at 4020.144 kb on + strand at 4020.144 kb on + strand at 4020.144 kb on + strand at 4020.144 kb on + strand at 4020.145 kb on - strand at 4020.145 kb on - strand at 4020.145 kb on - strand at 4020.145 kb on - strand at 4020.145 kb on - strand at 4020.221 kb on + strand, within AO356_17815 at 4020.221 kb on + strand, within AO356_17815 at 4020.221 kb on + strand, within AO356_17815 at 4020.222 kb on - strand, within AO356_17815 at 4020.222 kb on - strand, within AO356_17815 at 4020.222 kb on - strand, within AO356_17815 at 4020.348 kb on + strand, within AO356_17815 at 4020.348 kb on + strand, within AO356_17815 at 4020.348 kb on + strand, within AO356_17815 at 4020.349 kb on - strand, within AO356_17815 at 4020.349 kb on - strand, within AO356_17815 at 4020.349 kb on - strand, within AO356_17815 at 4020.456 kb on + strand, within AO356_17815 at 4020.456 kb on + strand, within AO356_17815 at 4020.457 kb on - strand, within AO356_17815 at 4020.457 kb on - strand, within AO356_17815 at 4020.480 kb on - strand, within AO356_17815 at 4020.480 kb on - strand, within AO356_17815 at 4020.538 kb on - strand, within AO356_17815 at 4020.547 kb on - strand, within AO356_17815 at 4020.547 kb on - strand, within AO356_17815 at 4020.865 kb on + strand, within AO356_17815 at 4020.866 kb on - strand, within AO356_17815 at 4020.866 kb on - strand, within AO356_17815 at 4020.866 kb on - strand, within AO356_17815 at 4020.866 kb on - strand, within AO356_17815 at 4020.866 kb on - strand, within AO356_17815 at 4020.866 kb on - strand, within AO356_17815 at 4021.080 kb on + strand at 4021.185 kb on + strand at 4021.228 kb on + strand at 4021.228 kb on + strand at 4021.229 kb on - strand, within AO356_17820 at 4021.687 kb on + strand, within AO356_17820 at 4021.687 kb on + strand, within AO356_17820 at 4021.687 kb on + strand, within AO356_17820 at 4021.687 kb on + strand, within AO356_17820 at 4021.688 kb on - strand, within AO356_17820 at 4021.688 kb on - strand, within AO356_17820 at 4021.807 kb on - strand, within AO356_17820 at 4021.807 kb on - strand, within AO356_17820 at 4021.807 kb on - strand, within AO356_17820 at 4021.837 kb on + strand, within AO356_17820 at 4021.838 kb on - strand, within AO356_17820 at 4021.838 kb on - strand, within AO356_17820 at 4021.964 kb on + strand, within AO356_17820 at 4021.964 kb on + strand, within AO356_17820 at 4021.964 kb on + strand, within AO356_17820 at 4021.964 kb on + strand, within AO356_17820 at 4021.965 kb on - strand, within AO356_17820 at 4021.965 kb on - strand, within AO356_17820 at 4022.011 kb on + strand at 4022.011 kb on + strand at 4022.012 kb on - strand at 4022.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 4,019,519 + +1.4 4,019,620 - +0.6 4,019,620 - -0.0 4,019,664 + -0.2 4,019,665 - -0.5 4,019,665 - -0.8 4,019,665 - +0.3 4,019,697 - +0.5 4,019,713 - -1.2 4,019,713 - -0.4 4,019,714 + -1.2 4,019,715 - +0.4 4,019,746 + +0.4 4,019,747 - +0.6 4,019,747 - -0.9 4,019,828 - +1.2 4,019,861 + -2.4 4,019,862 - +1.6 4,019,862 - +0.2 4,019,862 - +0.5 4,019,888 - +0.7 4,019,959 - +1.2 4,019,959 - +1.2 4,019,968 + -1.2 4,019,993 - +1.4 4,019,993 - +0.6 4,019,993 - +1.1 4,020,096 + +1.9 4,020,144 + +1.3 4,020,144 + +1.4 4,020,144 + +1.6 4,020,144 + +0.2 4,020,144 + +3.0 4,020,145 - +0.1 4,020,145 - +1.5 4,020,145 - +1.7 4,020,145 - +1.5 4,020,145 - +1.4 4,020,221 + AO356_17815 0.17 +1.1 4,020,221 + AO356_17815 0.17 +1.9 4,020,221 + AO356_17815 0.17 +1.1 4,020,222 - AO356_17815 0.17 +1.1 4,020,222 - AO356_17815 0.17 +0.6 4,020,222 - AO356_17815 0.17 +2.1 4,020,348 + AO356_17815 0.28 +2.4 4,020,348 + AO356_17815 0.28 +1.3 4,020,348 + AO356_17815 0.28 +1.9 4,020,349 - AO356_17815 0.28 +1.1 4,020,349 - AO356_17815 0.28 +0.5 4,020,349 - AO356_17815 0.28 +1.7 4,020,456 + AO356_17815 0.38 +1.6 4,020,456 + AO356_17815 0.38 +2.4 4,020,457 - AO356_17815 0.38 +1.5 4,020,457 - AO356_17815 0.38 +1.3 4,020,480 - AO356_17815 0.40 +1.0 4,020,480 - AO356_17815 0.40 +1.2 4,020,538 - AO356_17815 0.45 +2.7 4,020,547 - AO356_17815 0.46 +1.9 4,020,547 - AO356_17815 0.46 +1.1 4,020,865 + AO356_17815 0.75 +1.9 4,020,866 - AO356_17815 0.75 +1.3 4,020,866 - AO356_17815 0.75 +1.4 4,020,866 - AO356_17815 0.75 +1.0 4,020,866 - AO356_17815 0.75 +1.0 4,020,866 - AO356_17815 0.75 +0.9 4,020,866 - AO356_17815 0.75 +1.2 4,021,080 + +0.6 4,021,185 + +1.8 4,021,228 + -0.0 4,021,228 + +0.3 4,021,229 - AO356_17820 0.10 +3.3 4,021,687 + AO356_17820 0.59 -0.1 4,021,687 + AO356_17820 0.59 +0.0 4,021,687 + AO356_17820 0.59 +0.1 4,021,687 + AO356_17820 0.59 -1.2 4,021,688 - AO356_17820 0.59 +1.0 4,021,688 - AO356_17820 0.59 -0.2 4,021,807 - AO356_17820 0.72 +0.9 4,021,807 - AO356_17820 0.72 +0.1 4,021,807 - AO356_17820 0.72 +0.0 4,021,837 + AO356_17820 0.75 +0.2 4,021,838 - AO356_17820 0.75 -0.2 4,021,838 - AO356_17820 0.75 -1.1 4,021,964 + AO356_17820 0.89 +0.5 4,021,964 + AO356_17820 0.89 +0.0 4,021,964 + AO356_17820 0.89 +0.5 4,021,964 + AO356_17820 0.89 +1.6 4,021,965 - AO356_17820 0.89 +0.6 4,021,965 - AO356_17820 0.89 +0.1 4,022,011 + +0.5 4,022,011 + -0.4 4,022,012 - -0.6 4,022,012 - +1.1
Or see this region's nucleotide sequence