Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17030 and AO356_17035 are separated by 102 nucleotides AO356_17035 and AO356_17040 are separated by 190 nucleotides
AO356_17030: AO356_17030 - tryptophan--tRNA ligase, at 3,835,088 to 3,836,443
_17030
AO356_17035: AO356_17035 - ATPase, at 3,836,546 to 3,837,640
_17035
AO356_17040: AO356_17040 - AraC family transcriptional regulator, at 3,837,831 to 3,838,826
_17040
Position (kb)
3836
3837
3838 Strain fitness (log2 ratio)
-2
-1
0
1 at 3836.508 kb on + strand at 3836.546 kb on - strand at 3836.546 kb on - strand at 3836.556 kb on + strand at 3836.557 kb on - strand at 3836.557 kb on - strand at 3836.564 kb on + strand at 3836.642 kb on + strand at 3836.732 kb on + strand, within AO356_17035 at 3836.732 kb on + strand, within AO356_17035 at 3836.733 kb on - strand, within AO356_17035 at 3836.733 kb on - strand, within AO356_17035 at 3836.733 kb on - strand, within AO356_17035 at 3836.733 kb on - strand, within AO356_17035 at 3836.765 kb on + strand, within AO356_17035 at 3836.765 kb on + strand, within AO356_17035 at 3836.766 kb on - strand, within AO356_17035 at 3836.766 kb on - strand, within AO356_17035 at 3837.053 kb on + strand, within AO356_17035 at 3837.053 kb on + strand, within AO356_17035 at 3837.053 kb on + strand, within AO356_17035 at 3837.054 kb on - strand, within AO356_17035 at 3837.054 kb on - strand, within AO356_17035 at 3837.054 kb on - strand, within AO356_17035 at 3837.377 kb on + strand, within AO356_17035 at 3837.377 kb on + strand, within AO356_17035 at 3837.489 kb on - strand, within AO356_17035 at 3837.543 kb on - strand at 3837.543 kb on - strand at 3837.639 kb on - strand at 3837.688 kb on - strand at 3837.881 kb on + strand at 3837.881 kb on + strand at 3837.881 kb on + strand at 3837.882 kb on - strand at 3837.882 kb on - strand at 3837.882 kb on - strand at 3837.882 kb on - strand at 3837.882 kb on - strand at 3837.934 kb on + strand, within AO356_17040 at 3837.934 kb on + strand, within AO356_17040 at 3837.934 kb on + strand, within AO356_17040 at 3837.934 kb on + strand, within AO356_17040 at 3837.935 kb on - strand, within AO356_17040 at 3837.935 kb on - strand, within AO356_17040 at 3838.009 kb on + strand, within AO356_17040 at 3838.009 kb on + strand, within AO356_17040 at 3838.009 kb on + strand, within AO356_17040 at 3838.010 kb on - strand, within AO356_17040 at 3838.010 kb on - strand, within AO356_17040 at 3838.010 kb on - strand, within AO356_17040 at 3838.010 kb on - strand, within AO356_17040 at 3838.010 kb on - strand, within AO356_17040 at 3838.201 kb on + strand, within AO356_17040 at 3838.201 kb on + strand, within AO356_17040 at 3838.202 kb on - strand, within AO356_17040 at 3838.219 kb on + strand, within AO356_17040 at 3838.220 kb on - strand, within AO356_17040 at 3838.279 kb on + strand, within AO356_17040 at 3838.280 kb on - strand, within AO356_17040 at 3838.285 kb on + strand, within AO356_17040 at 3838.285 kb on + strand, within AO356_17040 at 3838.285 kb on + strand, within AO356_17040 at 3838.286 kb on - strand, within AO356_17040 at 3838.286 kb on - strand, within AO356_17040 at 3838.286 kb on - strand, within AO356_17040 at 3838.286 kb on - strand, within AO356_17040 at 3838.286 kb on - strand, within AO356_17040 at 3838.408 kb on + strand, within AO356_17040 at 3838.408 kb on + strand, within AO356_17040 at 3838.408 kb on + strand, within AO356_17040 at 3838.409 kb on - strand, within AO356_17040 at 3838.409 kb on - strand, within AO356_17040 at 3838.521 kb on + strand, within AO356_17040 at 3838.521 kb on + strand, within AO356_17040 at 3838.522 kb on - strand, within AO356_17040 at 3838.522 kb on - strand, within AO356_17040 at 3838.522 kb on - strand, within AO356_17040
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 3,836,508 + +0.4 3,836,546 - -0.3 3,836,546 - +1.1 3,836,556 + -1.5 3,836,557 - +0.4 3,836,557 - +1.1 3,836,564 + -0.3 3,836,642 + -0.6 3,836,732 + AO356_17035 0.17 -1.7 3,836,732 + AO356_17035 0.17 -0.0 3,836,733 - AO356_17035 0.17 +0.2 3,836,733 - AO356_17035 0.17 -1.6 3,836,733 - AO356_17035 0.17 -1.4 3,836,733 - AO356_17035 0.17 -0.3 3,836,765 + AO356_17035 0.20 +1.0 3,836,765 + AO356_17035 0.20 -0.7 3,836,766 - AO356_17035 0.20 -2.0 3,836,766 - AO356_17035 0.20 -2.4 3,837,053 + AO356_17035 0.46 -0.7 3,837,053 + AO356_17035 0.46 -0.9 3,837,053 + AO356_17035 0.46 -2.2 3,837,054 - AO356_17035 0.46 +0.9 3,837,054 - AO356_17035 0.46 +0.1 3,837,054 - AO356_17035 0.46 -0.0 3,837,377 + AO356_17035 0.76 -1.9 3,837,377 + AO356_17035 0.76 -0.6 3,837,489 - AO356_17035 0.86 -0.2 3,837,543 - -1.6 3,837,543 - -2.2 3,837,639 - +0.4 3,837,688 - +0.3 3,837,881 + -0.6 3,837,881 + +0.1 3,837,881 + -0.2 3,837,882 - +0.6 3,837,882 - -0.4 3,837,882 - +0.3 3,837,882 - -0.4 3,837,882 - -1.0 3,837,934 + AO356_17040 0.10 +0.4 3,837,934 + AO356_17040 0.10 -0.3 3,837,934 + AO356_17040 0.10 +0.1 3,837,934 + AO356_17040 0.10 +0.0 3,837,935 - AO356_17040 0.10 -1.1 3,837,935 - AO356_17040 0.10 -0.5 3,838,009 + AO356_17040 0.18 -0.2 3,838,009 + AO356_17040 0.18 -0.2 3,838,009 + AO356_17040 0.18 -0.5 3,838,010 - AO356_17040 0.18 -1.5 3,838,010 - AO356_17040 0.18 +0.3 3,838,010 - AO356_17040 0.18 -0.0 3,838,010 - AO356_17040 0.18 -0.5 3,838,010 - AO356_17040 0.18 -1.6 3,838,201 + AO356_17040 0.37 +0.6 3,838,201 + AO356_17040 0.37 +0.7 3,838,202 - AO356_17040 0.37 -1.5 3,838,219 + AO356_17040 0.39 -0.7 3,838,220 - AO356_17040 0.39 -1.9 3,838,279 + AO356_17040 0.45 +0.8 3,838,280 - AO356_17040 0.45 -0.3 3,838,285 + AO356_17040 0.46 -0.3 3,838,285 + AO356_17040 0.46 -2.1 3,838,285 + AO356_17040 0.46 -0.7 3,838,286 - AO356_17040 0.46 +0.4 3,838,286 - AO356_17040 0.46 +1.0 3,838,286 - AO356_17040 0.46 -0.7 3,838,286 - AO356_17040 0.46 -0.2 3,838,286 - AO356_17040 0.46 -0.2 3,838,408 + AO356_17040 0.58 +0.1 3,838,408 + AO356_17040 0.58 +1.0 3,838,408 + AO356_17040 0.58 +1.2 3,838,409 - AO356_17040 0.58 +0.1 3,838,409 - AO356_17040 0.58 +0.7 3,838,521 + AO356_17040 0.69 -1.0 3,838,521 + AO356_17040 0.69 +0.7 3,838,522 - AO356_17040 0.69 +0.2 3,838,522 - AO356_17040 0.69 -0.3 3,838,522 - AO356_17040 0.69 +1.4
Or see this region's nucleotide sequence