Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10965 and AO356_10970 are separated by 277 nucleotides AO356_10970 and AO356_10975 are separated by 191 nucleotides
AO356_10965: AO356_10965 - aminopeptidase, at 2,492,164 to 2,493,255
_10965
AO356_10970: AO356_10970 - integration host factor, at 2,493,533 to 2,493,808
_10970
AO356_10975: AO356_10975 - pyridine nucleotide-disulfide oxidoreductase, at 2,494,000 to 2,495,148
_10975
Position (kb)
2493
2494 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2492.552 kb on - strand, within AO356_10965 at 2492.560 kb on + strand, within AO356_10965 at 2492.563 kb on + strand, within AO356_10965 at 2492.563 kb on + strand, within AO356_10965 at 2492.563 kb on + strand, within AO356_10965 at 2492.563 kb on + strand, within AO356_10965 at 2492.564 kb on - strand, within AO356_10965 at 2492.644 kb on + strand, within AO356_10965 at 2492.644 kb on + strand, within AO356_10965 at 2492.645 kb on - strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.753 kb on - strand, within AO356_10965 at 2492.753 kb on - strand, within AO356_10965 at 2492.756 kb on + strand, within AO356_10965 at 2492.756 kb on + strand, within AO356_10965 at 2492.757 kb on - strand, within AO356_10965 at 2492.926 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2493.040 kb on + strand, within AO356_10965 at 2493.040 kb on + strand, within AO356_10965 at 2493.040 kb on + strand, within AO356_10965 at 2493.040 kb on + strand, within AO356_10965 at 2493.041 kb on - strand, within AO356_10965 at 2493.041 kb on - strand, within AO356_10965 at 2493.055 kb on + strand, within AO356_10965 at 2493.080 kb on + strand, within AO356_10965 at 2493.081 kb on - strand, within AO356_10965 at 2493.081 kb on - strand, within AO356_10965 at 2493.081 kb on - strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.164 kb on - strand at 2493.164 kb on - strand at 2493.164 kb on - strand at 2493.164 kb on - strand at 2493.225 kb on - strand at 2493.225 kb on - strand at 2493.253 kb on + strand at 2493.302 kb on - strand at 2493.302 kb on - strand at 2493.331 kb on + strand at 2493.331 kb on + strand at 2493.332 kb on - strand at 2493.332 kb on - strand at 2493.332 kb on - strand at 2493.365 kb on + strand at 2493.365 kb on + strand at 2493.366 kb on - strand at 2493.482 kb on - strand at 2493.522 kb on - strand at 2493.522 kb on - strand at 2493.522 kb on - strand at 2493.528 kb on - strand at 2493.534 kb on + strand at 2493.534 kb on + strand at 2493.535 kb on - strand at 2493.802 kb on + strand at 2493.802 kb on + strand at 2493.803 kb on - strand at 2493.803 kb on - strand at 2493.803 kb on - strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.874 kb on - strand at 2493.891 kb on - strand at 2493.891 kb on - strand at 2493.891 kb on - strand at 2493.891 kb on - strand at 2493.891 kb on - strand at 2493.972 kb on - strand at 2493.972 kb on - strand at 2493.997 kb on + strand at 2493.997 kb on + strand at 2493.997 kb on + strand at 2493.998 kb on - strand at 2493.998 kb on - strand at 2493.998 kb on - strand at 2493.998 kb on - strand at 2494.198 kb on + strand, within AO356_10975 at 2494.198 kb on + strand, within AO356_10975 at 2494.204 kb on - strand, within AO356_10975 at 2494.221 kb on - strand, within AO356_10975 at 2494.221 kb on - strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.292 kb on + strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.293 kb on - strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.337 kb on + strand, within AO356_10975 at 2494.338 kb on - strand, within AO356_10975 at 2494.338 kb on - strand, within AO356_10975 at 2494.338 kb on - strand, within AO356_10975 at 2494.338 kb on - strand, within AO356_10975 at 2494.338 kb on - strand, within AO356_10975 at 2494.341 kb on + strand, within AO356_10975 at 2494.341 kb on + strand, within AO356_10975 at 2494.341 kb on + strand, within AO356_10975 at 2494.342 kb on - strand, within AO356_10975 at 2494.342 kb on - strand, within AO356_10975 at 2494.342 kb on - strand, within AO356_10975 at 2494.342 kb on - strand, within AO356_10975 at 2494.342 kb on - strand, within AO356_10975 at 2494.342 kb on - strand, within AO356_10975 at 2494.642 kb on + strand, within AO356_10975 at 2494.642 kb on + strand, within AO356_10975 at 2494.642 kb on + strand, within AO356_10975 at 2494.643 kb on - strand, within AO356_10975 at 2494.643 kb on - strand, within AO356_10975 at 2494.643 kb on - strand, within AO356_10975 at 2494.751 kb on + strand, within AO356_10975 at 2494.751 kb on + strand, within AO356_10975 at 2494.752 kb on - strand, within AO356_10975
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 2,492,552 - AO356_10965 0.36 +1.1 2,492,560 + AO356_10965 0.36 +1.8 2,492,563 + AO356_10965 0.37 +0.4 2,492,563 + AO356_10965 0.37 -0.1 2,492,563 + AO356_10965 0.37 -0.4 2,492,563 + AO356_10965 0.37 -0.8 2,492,564 - AO356_10965 0.37 -0.8 2,492,644 + AO356_10965 0.44 +0.0 2,492,644 + AO356_10965 0.44 +0.6 2,492,645 - AO356_10965 0.44 +0.0 2,492,752 + AO356_10965 0.54 +0.4 2,492,752 + AO356_10965 0.54 +1.1 2,492,752 + AO356_10965 0.54 +0.3 2,492,752 + AO356_10965 0.54 -1.1 2,492,752 + AO356_10965 0.54 +1.8 2,492,752 + AO356_10965 0.54 +0.6 2,492,752 + AO356_10965 0.54 +1.0 2,492,753 - AO356_10965 0.54 -1.6 2,492,753 - AO356_10965 0.54 +0.1 2,492,756 + AO356_10965 0.54 +1.3 2,492,756 + AO356_10965 0.54 +0.3 2,492,757 - AO356_10965 0.54 -0.1 2,492,926 + AO356_10965 0.70 -0.1 2,492,998 + AO356_10965 0.76 +0.4 2,492,998 + AO356_10965 0.76 +0.2 2,492,998 + AO356_10965 0.76 -0.9 2,492,998 + AO356_10965 0.76 -0.4 2,492,998 + AO356_10965 0.76 -0.3 2,492,998 + AO356_10965 0.76 +0.2 2,492,999 - AO356_10965 0.76 -0.6 2,492,999 - AO356_10965 0.76 +0.6 2,492,999 - AO356_10965 0.76 -0.2 2,492,999 - AO356_10965 0.76 -0.3 2,492,999 - AO356_10965 0.76 +0.2 2,492,999 - AO356_10965 0.76 -1.3 2,492,999 - AO356_10965 0.76 -0.1 2,492,999 - AO356_10965 0.76 +0.4 2,493,040 + AO356_10965 0.80 +1.6 2,493,040 + AO356_10965 0.80 +0.5 2,493,040 + AO356_10965 0.80 -0.1 2,493,040 + AO356_10965 0.80 +0.5 2,493,041 - AO356_10965 0.80 -1.1 2,493,041 - AO356_10965 0.80 +0.2 2,493,055 + AO356_10965 0.82 -0.2 2,493,080 + AO356_10965 0.84 +0.9 2,493,081 - AO356_10965 0.84 +0.5 2,493,081 - AO356_10965 0.84 -0.3 2,493,081 - AO356_10965 0.84 -0.5 2,493,097 + AO356_10965 0.85 +0.2 2,493,097 + AO356_10965 0.85 -0.3 2,493,097 + AO356_10965 0.85 +0.3 2,493,097 + AO356_10965 0.85 -1.1 2,493,097 + AO356_10965 0.85 -0.8 2,493,097 + AO356_10965 0.85 -0.3 2,493,097 + AO356_10965 0.85 -0.8 2,493,097 + AO356_10965 0.85 +0.2 2,493,098 - AO356_10965 0.86 -0.8 2,493,098 - AO356_10965 0.86 -0.4 2,493,098 - AO356_10965 0.86 +1.2 2,493,098 - AO356_10965 0.86 -0.2 2,493,098 - AO356_10965 0.86 -1.3 2,493,098 - AO356_10965 0.86 +0.5 2,493,098 - AO356_10965 0.86 -0.3 2,493,163 + +0.2 2,493,163 + +0.7 2,493,163 + +0.9 2,493,163 + -0.3 2,493,163 + -0.8 2,493,163 + -0.1 2,493,164 - +0.7 2,493,164 - -0.2 2,493,164 - +0.7 2,493,164 - +1.3 2,493,225 - +0.3 2,493,225 - -1.3 2,493,253 + -0.3 2,493,302 - +1.1 2,493,302 - -0.6 2,493,331 + +0.3 2,493,331 + +1.6 2,493,332 - -0.7 2,493,332 - -0.1 2,493,332 - +1.1 2,493,365 + +0.7 2,493,365 + +0.1 2,493,366 - +0.3 2,493,482 - +0.3 2,493,522 - -1.1 2,493,522 - +0.0 2,493,522 - +0.0 2,493,528 - +0.2 2,493,534 + -0.2 2,493,534 + +1.1 2,493,535 - +0.4 2,493,802 + +0.2 2,493,802 + -0.2 2,493,803 - +0.3 2,493,803 - +1.8 2,493,803 - -1.1 2,493,841 + -0.0 2,493,841 + -1.1 2,493,841 + -0.9 2,493,841 + -1.0 2,493,841 + +0.1 2,493,841 + -0.1 2,493,841 + -0.2 2,493,841 + -0.7 2,493,841 + +0.8 2,493,841 + +0.1 2,493,841 + +0.2 2,493,841 + -0.7 2,493,841 + -0.9 2,493,841 + +0.5 2,493,841 + +0.3 2,493,841 + +1.3 2,493,842 - -0.2 2,493,842 - +0.4 2,493,842 - +0.8 2,493,842 - +0.0 2,493,842 - +0.1 2,493,842 - -1.2 2,493,842 - +0.1 2,493,842 - -0.5 2,493,842 - +0.6 2,493,842 - +1.8 2,493,842 - -0.5 2,493,842 - -1.2 2,493,874 - +0.2 2,493,891 - -0.4 2,493,891 - -0.1 2,493,891 - -0.2 2,493,891 - +0.9 2,493,891 - -0.4 2,493,972 - -0.2 2,493,972 - -0.1 2,493,997 + +0.3 2,493,997 + +0.5 2,493,997 + -0.0 2,493,998 - -1.7 2,493,998 - -0.4 2,493,998 - -1.0 2,493,998 - +0.5 2,494,198 + AO356_10975 0.17 +0.5 2,494,198 + AO356_10975 0.17 -0.6 2,494,204 - AO356_10975 0.18 -0.1 2,494,221 - AO356_10975 0.19 +0.5 2,494,221 - AO356_10975 0.19 +0.3 2,494,292 + AO356_10975 0.25 +0.5 2,494,292 + AO356_10975 0.25 +1.6 2,494,292 + AO356_10975 0.25 -0.2 2,494,292 + AO356_10975 0.25 -0.1 2,494,292 + AO356_10975 0.25 +0.0 2,494,292 + AO356_10975 0.25 -1.2 2,494,292 + AO356_10975 0.25 -0.5 2,494,292 + AO356_10975 0.25 -0.1 2,494,292 + AO356_10975 0.25 +0.2 2,494,292 + AO356_10975 0.25 +0.4 2,494,292 + AO356_10975 0.25 +1.1 2,494,292 + AO356_10975 0.25 +0.3 2,494,292 + AO356_10975 0.25 -2.0 2,494,292 + AO356_10975 0.25 +0.2 2,494,292 + AO356_10975 0.25 +0.9 2,494,292 + AO356_10975 0.25 -0.3 2,494,292 + AO356_10975 0.25 -0.1 2,494,293 - AO356_10975 0.26 -1.1 2,494,293 - AO356_10975 0.26 -0.5 2,494,293 - AO356_10975 0.26 +0.5 2,494,293 - AO356_10975 0.26 +0.1 2,494,293 - AO356_10975 0.26 +0.7 2,494,293 - AO356_10975 0.26 -0.6 2,494,293 - AO356_10975 0.26 +0.6 2,494,293 - AO356_10975 0.26 -0.4 2,494,293 - AO356_10975 0.26 -0.7 2,494,337 + AO356_10975 0.29 +0.1 2,494,337 + AO356_10975 0.29 +0.3 2,494,337 + AO356_10975 0.29 +0.3 2,494,337 + AO356_10975 0.29 -0.8 2,494,337 + AO356_10975 0.29 +1.1 2,494,337 + AO356_10975 0.29 +0.5 2,494,337 + AO356_10975 0.29 +1.0 2,494,337 + AO356_10975 0.29 -1.3 2,494,337 + AO356_10975 0.29 +0.7 2,494,337 + AO356_10975 0.29 -0.5 2,494,338 - AO356_10975 0.29 +0.3 2,494,338 - AO356_10975 0.29 -0.4 2,494,338 - AO356_10975 0.29 -1.4 2,494,338 - AO356_10975 0.29 +0.6 2,494,338 - AO356_10975 0.29 -0.2 2,494,341 + AO356_10975 0.30 +0.2 2,494,341 + AO356_10975 0.30 +0.7 2,494,341 + AO356_10975 0.30 -0.1 2,494,342 - AO356_10975 0.30 -1.0 2,494,342 - AO356_10975 0.30 +0.3 2,494,342 - AO356_10975 0.30 +1.2 2,494,342 - AO356_10975 0.30 +0.9 2,494,342 - AO356_10975 0.30 -1.0 2,494,342 - AO356_10975 0.30 -0.6 2,494,642 + AO356_10975 0.56 +0.9 2,494,642 + AO356_10975 0.56 -1.4 2,494,642 + AO356_10975 0.56 -1.4 2,494,643 - AO356_10975 0.56 -3.0 2,494,643 - AO356_10975 0.56 -0.2 2,494,643 - AO356_10975 0.56 +0.6 2,494,751 + AO356_10975 0.65 +0.5 2,494,751 + AO356_10975 0.65 +1.4 2,494,752 - AO356_10975 0.65 +1.1
Or see this region's nucleotide sequence