Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10580 and AO356_10585 are separated by 14 nucleotides AO356_10585 and AO356_10590 are separated by 202 nucleotides
AO356_10580: AO356_10580 - hypothetical protein, at 2,406,571 to 2,408,517
_10580
AO356_10585: AO356_10585 - hypothetical protein, at 2,408,532 to 2,409,224
_10585
AO356_10590: AO356_10590 - GntR family transcriptional regulator, at 2,409,427 to 2,410,119
_10590
Position (kb)
2408
2409
2410 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2407.569 kb on + strand, within AO356_10580 at 2407.569 kb on + strand, within AO356_10580 at 2407.808 kb on + strand, within AO356_10580 at 2407.809 kb on - strand, within AO356_10580 at 2407.982 kb on + strand, within AO356_10580 at 2407.982 kb on + strand, within AO356_10580 at 2407.982 kb on + strand, within AO356_10580 at 2407.983 kb on - strand, within AO356_10580 at 2407.983 kb on - strand, within AO356_10580 at 2408.291 kb on + strand, within AO356_10580 at 2408.291 kb on + strand, within AO356_10580 at 2408.291 kb on + strand, within AO356_10580 at 2408.291 kb on + strand, within AO356_10580 at 2408.292 kb on - strand, within AO356_10580 at 2408.292 kb on - strand, within AO356_10580 at 2408.292 kb on - strand, within AO356_10580 at 2408.295 kb on - strand, within AO356_10580 at 2408.418 kb on - strand at 2408.418 kb on - strand at 2408.418 kb on - strand at 2408.418 kb on - strand at 2408.418 kb on - strand at 2408.418 kb on - strand at 2408.533 kb on + strand at 2408.533 kb on + strand at 2408.533 kb on + strand at 2408.533 kb on + strand at 2408.533 kb on + strand at 2408.534 kb on - strand at 2408.534 kb on - strand at 2408.537 kb on + strand at 2408.537 kb on + strand at 2408.538 kb on - strand at 2408.538 kb on - strand at 2408.538 kb on - strand at 2408.671 kb on + strand, within AO356_10585 at 2408.671 kb on + strand, within AO356_10585 at 2408.761 kb on + strand, within AO356_10585 at 2408.761 kb on + strand, within AO356_10585 at 2408.761 kb on + strand, within AO356_10585 at 2408.762 kb on - strand, within AO356_10585 at 2408.762 kb on - strand, within AO356_10585 at 2408.764 kb on + strand, within AO356_10585 at 2408.764 kb on + strand, within AO356_10585 at 2408.764 kb on + strand, within AO356_10585 at 2408.764 kb on + strand, within AO356_10585 at 2408.764 kb on + strand, within AO356_10585 at 2408.765 kb on - strand, within AO356_10585 at 2408.765 kb on - strand, within AO356_10585 at 2408.765 kb on - strand, within AO356_10585 at 2408.765 kb on - strand, within AO356_10585 at 2408.765 kb on - strand, within AO356_10585 at 2408.809 kb on + strand, within AO356_10585 at 2408.809 kb on + strand, within AO356_10585 at 2408.809 kb on + strand, within AO356_10585 at 2408.810 kb on - strand, within AO356_10585 at 2408.810 kb on - strand, within AO356_10585 at 2408.810 kb on - strand, within AO356_10585 at 2408.810 kb on - strand, within AO356_10585 at 2408.860 kb on + strand, within AO356_10585 at 2408.860 kb on + strand, within AO356_10585 at 2408.860 kb on + strand, within AO356_10585 at 2408.860 kb on + strand, within AO356_10585 at 2408.860 kb on + strand, within AO356_10585 at 2408.861 kb on - strand, within AO356_10585 at 2408.861 kb on - strand, within AO356_10585 at 2408.861 kb on - strand, within AO356_10585 at 2408.861 kb on - strand, within AO356_10585 at 2408.861 kb on - strand, within AO356_10585 at 2408.965 kb on + strand, within AO356_10585 at 2408.966 kb on - strand, within AO356_10585 at 2408.966 kb on - strand, within AO356_10585 at 2409.091 kb on + strand, within AO356_10585 at 2409.091 kb on + strand, within AO356_10585 at 2409.091 kb on + strand, within AO356_10585 at 2409.091 kb on + strand, within AO356_10585 at 2409.091 kb on + strand, within AO356_10585 at 2409.092 kb on - strand, within AO356_10585 at 2409.092 kb on - strand, within AO356_10585 at 2409.092 kb on - strand, within AO356_10585 at 2409.092 kb on - strand, within AO356_10585 at 2409.092 kb on - strand, within AO356_10585 at 2409.092 kb on - strand, within AO356_10585 at 2409.092 kb on - strand, within AO356_10585 at 2409.093 kb on + strand, within AO356_10585 at 2409.093 kb on + strand, within AO356_10585 at 2409.093 kb on + strand, within AO356_10585 at 2409.093 kb on + strand, within AO356_10585 at 2409.093 kb on + strand, within AO356_10585 at 2409.093 kb on + strand, within AO356_10585 at 2409.094 kb on - strand, within AO356_10585 at 2409.094 kb on - strand, within AO356_10585 at 2409.231 kb on + strand at 2409.231 kb on + strand at 2409.231 kb on + strand at 2409.232 kb on - strand at 2409.232 kb on - strand at 2409.232 kb on - strand at 2409.232 kb on - strand at 2409.232 kb on - strand at 2409.232 kb on - strand at 2409.284 kb on - strand at 2409.284 kb on - strand at 2409.321 kb on + strand at 2409.321 kb on + strand at 2409.328 kb on + strand at 2409.328 kb on + strand at 2409.329 kb on - strand at 2409.329 kb on - strand at 2409.329 kb on - strand at 2409.380 kb on - strand at 2409.403 kb on + strand at 2409.403 kb on + strand at 2409.406 kb on + strand at 2409.407 kb on - strand at 2409.407 kb on - strand at 2409.450 kb on + strand at 2409.451 kb on - strand at 2409.451 kb on - strand at 2409.457 kb on - strand at 2409.704 kb on + strand, within AO356_10590 at 2409.704 kb on + strand, within AO356_10590 at 2409.712 kb on + strand, within AO356_10590 at 2409.712 kb on + strand, within AO356_10590 at 2409.799 kb on + strand, within AO356_10590 at 2409.799 kb on + strand, within AO356_10590 at 2409.800 kb on - strand, within AO356_10590 at 2409.800 kb on - strand, within AO356_10590 at 2409.800 kb on - strand, within AO356_10590 at 2409.800 kb on - strand, within AO356_10590 at 2410.093 kb on + strand at 2410.156 kb on + strand at 2410.156 kb on + strand at 2410.156 kb on + strand at 2410.156 kb on + strand at 2410.157 kb on - strand at 2410.157 kb on - strand at 2410.160 kb on + strand at 2410.160 kb on + strand at 2410.161 kb on - strand at 2410.161 kb on - strand at 2410.161 kb on - strand at 2410.161 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 2,407,569 + AO356_10580 0.51 -0.8 2,407,569 + AO356_10580 0.51 +0.8 2,407,808 + AO356_10580 0.64 -0.1 2,407,809 - AO356_10580 0.64 +0.7 2,407,982 + AO356_10580 0.72 +0.0 2,407,982 + AO356_10580 0.72 +0.4 2,407,982 + AO356_10580 0.72 +1.3 2,407,983 - AO356_10580 0.73 +0.5 2,407,983 - AO356_10580 0.73 -0.6 2,408,291 + AO356_10580 0.88 -0.1 2,408,291 + AO356_10580 0.88 -0.6 2,408,291 + AO356_10580 0.88 +0.2 2,408,291 + AO356_10580 0.88 +0.2 2,408,292 - AO356_10580 0.88 +0.6 2,408,292 - AO356_10580 0.88 +1.0 2,408,292 - AO356_10580 0.88 +0.4 2,408,295 - AO356_10580 0.89 +0.9 2,408,418 - +0.9 2,408,418 - -0.4 2,408,418 - +0.6 2,408,418 - -0.2 2,408,418 - +0.3 2,408,418 - +0.9 2,408,533 + +1.8 2,408,533 + -0.3 2,408,533 + +0.8 2,408,533 + +1.6 2,408,533 + +0.5 2,408,534 - +0.4 2,408,534 - +0.7 2,408,537 + +0.2 2,408,537 + -0.2 2,408,538 - +0.5 2,408,538 - +0.3 2,408,538 - +1.2 2,408,671 + AO356_10585 0.20 -0.1 2,408,671 + AO356_10585 0.20 -1.4 2,408,761 + AO356_10585 0.33 -0.9 2,408,761 + AO356_10585 0.33 -0.2 2,408,761 + AO356_10585 0.33 -0.3 2,408,762 - AO356_10585 0.33 -2.5 2,408,762 - AO356_10585 0.33 -2.7 2,408,764 + AO356_10585 0.33 -1.4 2,408,764 + AO356_10585 0.33 -1.6 2,408,764 + AO356_10585 0.33 -1.8 2,408,764 + AO356_10585 0.33 +0.0 2,408,764 + AO356_10585 0.33 -0.5 2,408,765 - AO356_10585 0.34 -2.0 2,408,765 - AO356_10585 0.34 -0.9 2,408,765 - AO356_10585 0.34 -1.7 2,408,765 - AO356_10585 0.34 -0.3 2,408,765 - AO356_10585 0.34 -0.6 2,408,809 + AO356_10585 0.40 -0.7 2,408,809 + AO356_10585 0.40 +0.6 2,408,809 + AO356_10585 0.40 +0.9 2,408,810 - AO356_10585 0.40 -1.2 2,408,810 - AO356_10585 0.40 -1.2 2,408,810 - AO356_10585 0.40 -1.1 2,408,810 - AO356_10585 0.40 -0.7 2,408,860 + AO356_10585 0.47 -0.2 2,408,860 + AO356_10585 0.47 -0.7 2,408,860 + AO356_10585 0.47 -0.3 2,408,860 + AO356_10585 0.47 +0.3 2,408,860 + AO356_10585 0.47 -1.9 2,408,861 - AO356_10585 0.47 -1.9 2,408,861 - AO356_10585 0.47 -1.2 2,408,861 - AO356_10585 0.47 +0.1 2,408,861 - AO356_10585 0.47 +0.8 2,408,861 - AO356_10585 0.47 -2.0 2,408,965 + AO356_10585 0.62 -0.4 2,408,966 - AO356_10585 0.63 -0.2 2,408,966 - AO356_10585 0.63 -0.9 2,409,091 + AO356_10585 0.81 -0.6 2,409,091 + AO356_10585 0.81 -0.3 2,409,091 + AO356_10585 0.81 -0.8 2,409,091 + AO356_10585 0.81 -0.4 2,409,091 + AO356_10585 0.81 -0.0 2,409,092 - AO356_10585 0.81 -1.3 2,409,092 - AO356_10585 0.81 -2.9 2,409,092 - AO356_10585 0.81 -1.6 2,409,092 - AO356_10585 0.81 -3.3 2,409,092 - AO356_10585 0.81 -1.0 2,409,092 - AO356_10585 0.81 -0.6 2,409,092 - AO356_10585 0.81 -0.9 2,409,093 + AO356_10585 0.81 -1.5 2,409,093 + AO356_10585 0.81 -1.1 2,409,093 + AO356_10585 0.81 -1.3 2,409,093 + AO356_10585 0.81 -2.5 2,409,093 + AO356_10585 0.81 +0.6 2,409,093 + AO356_10585 0.81 -1.3 2,409,094 - AO356_10585 0.81 +1.6 2,409,094 - AO356_10585 0.81 -0.9 2,409,231 + -1.7 2,409,231 + +0.6 2,409,231 + +0.7 2,409,232 - +0.1 2,409,232 - -0.7 2,409,232 - -1.9 2,409,232 - -0.8 2,409,232 - -0.2 2,409,232 - +0.0 2,409,284 - -2.6 2,409,284 - +0.7 2,409,321 + -0.6 2,409,321 + +0.4 2,409,328 + +1.1 2,409,328 + -0.1 2,409,329 - -0.6 2,409,329 - -0.6 2,409,329 - +0.0 2,409,380 - -0.5 2,409,403 + +0.2 2,409,403 + -2.4 2,409,406 + +0.9 2,409,407 - +0.5 2,409,407 - -0.9 2,409,450 + +0.4 2,409,451 - -0.8 2,409,451 - -0.6 2,409,457 - -0.5 2,409,704 + AO356_10590 0.40 +1.4 2,409,704 + AO356_10590 0.40 +0.3 2,409,712 + AO356_10590 0.41 -0.7 2,409,712 + AO356_10590 0.41 -0.7 2,409,799 + AO356_10590 0.54 +0.9 2,409,799 + AO356_10590 0.54 +1.1 2,409,800 - AO356_10590 0.54 +0.3 2,409,800 - AO356_10590 0.54 +0.5 2,409,800 - AO356_10590 0.54 -0.5 2,409,800 - AO356_10590 0.54 -0.6 2,410,093 + -0.7 2,410,156 + -0.8 2,410,156 + +0.7 2,410,156 + -1.7 2,410,156 + -1.0 2,410,157 - +0.3 2,410,157 - +0.4 2,410,160 + +0.5 2,410,160 + -1.3 2,410,161 - -0.4 2,410,161 - +1.3 2,410,161 - +0.5 2,410,161 - -0.5
Or see this region's nucleotide sequence