Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_08925

Experiment: Cobalt chloride 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_08920 and AO356_08925 overlap by 1 nucleotidesAO356_08925 and AO356_08930 overlap by 4 nucleotidesAO356_08930 and AO356_08935 overlap by 1 nucleotides AO356_08920: AO356_08920 - serine/threonine protein kinase, at 2,011,215 to 2,012,660 _08920 AO356_08925: AO356_08925 - lipopolysaccharide kinase, at 2,012,660 to 2,013,412 _08925 AO356_08930: AO356_08930 - heptose kinase, at 2,013,409 to 2,014,143 _08930 AO356_08935: AO356_08935 - heptose kinase, at 2,014,143 to 2,014,949 _08935 Position (kb) 2012 2013 2014Strain fitness (log2 ratio) -2 -1 0 1at 2012.746 kb on - strand, within AO356_08925at 2012.746 kb on - strand, within AO356_08925at 2012.746 kb on - strand, within AO356_08925at 2012.766 kb on - strand, within AO356_08925at 2012.766 kb on - strand, within AO356_08925at 2012.766 kb on - strand, within AO356_08925at 2012.884 kb on - strand, within AO356_08925at 2013.115 kb on - strand, within AO356_08925at 2013.226 kb on - strand, within AO356_08925at 2013.226 kb on - strand, within AO356_08925at 2013.226 kb on - strand, within AO356_08925at 2013.247 kb on - strand, within AO356_08925at 2013.247 kb on - strand, within AO356_08925at 2013.247 kb on - strand, within AO356_08925at 2013.247 kb on - strand, within AO356_08925at 2013.247 kb on - strand, within AO356_08925at 2013.247 kb on - strand, within AO356_08925at 2013.247 kb on - strand, within AO356_08925at 2013.250 kb on - strand, within AO356_08925at 2013.250 kb on - strand, within AO356_08925at 2013.279 kb on - strand, within AO356_08925at 2013.489 kb on - strand, within AO356_08930at 2013.709 kb on - strand, within AO356_08930at 2013.709 kb on - strand, within AO356_08930at 2013.709 kb on - strand, within AO356_08930at 2013.840 kb on - strand, within AO356_08930at 2013.996 kb on - strand, within AO356_08930at 2013.999 kb on - strand, within AO356_08930at 2014.116 kb on - strandat 2014.116 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM
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2,012,746 - AO356_08925 0.11 +0.8
2,012,746 - AO356_08925 0.11 +0.0
2,012,746 - AO356_08925 0.11 +0.4
2,012,766 - AO356_08925 0.14 -1.5
2,012,766 - AO356_08925 0.14 -0.3
2,012,766 - AO356_08925 0.14 -1.7
2,012,884 - AO356_08925 0.30 +0.6
2,013,115 - AO356_08925 0.60 -2.5
2,013,226 - AO356_08925 0.75 -0.4
2,013,226 - AO356_08925 0.75 -1.7
2,013,226 - AO356_08925 0.75 -0.7
2,013,247 - AO356_08925 0.78 -0.7
2,013,247 - AO356_08925 0.78 -0.7
2,013,247 - AO356_08925 0.78 +0.0
2,013,247 - AO356_08925 0.78 -0.3
2,013,247 - AO356_08925 0.78 -0.4
2,013,247 - AO356_08925 0.78 -1.6
2,013,247 - AO356_08925 0.78 -0.9
2,013,250 - AO356_08925 0.78 -2.7
2,013,250 - AO356_08925 0.78 +0.1
2,013,279 - AO356_08925 0.82 -1.6
2,013,489 - AO356_08930 0.11 +0.4
2,013,709 - AO356_08930 0.41 -1.2
2,013,709 - AO356_08930 0.41 -1.6
2,013,709 - AO356_08930 0.41 -1.2
2,013,840 - AO356_08930 0.59 -0.6
2,013,996 - AO356_08930 0.80 -2.0
2,013,999 - AO356_08930 0.80 -1.6
2,014,116 - -1.7
2,014,116 - -1.0

Or see this region's nucleotide sequence