Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08090 and AO356_08095 are separated by 101 nucleotides AO356_08095 and AO356_08100 overlap by 4 nucleotides AO356_08100 and AO356_08105 are separated by 268 nucleotides
AO356_08090: AO356_08090 - acetyl-CoA acetyltransferase, at 1,812,032 to 1,813,309
_08090
AO356_08095: AO356_08095 - transposase, at 1,813,411 to 1,814,247
_08095
AO356_08100: AO356_08100 - transposase, at 1,814,244 to 1,814,546
_08100
AO356_08105: AO356_08105 - 3-ketoacyl-ACP reductase, at 1,814,815 to 1,816,167
_08105
Position (kb)
1814
1815 Strain fitness (log2 ratio)
-1
0
1 at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.299 kb on - strand at 1813.324 kb on + strand at 1813.324 kb on + strand at 1813.324 kb on + strand at 1813.324 kb on + strand at 1813.324 kb on + strand at 1813.325 kb on - strand at 1813.325 kb on - strand at 1813.325 kb on - strand at 1813.338 kb on + strand at 1813.338 kb on + strand at 1813.405 kb on - strand at 1814.607 kb on + strand at 1814.654 kb on + strand at 1814.655 kb on - strand at 1814.736 kb on + strand at 1814.736 kb on + strand at 1814.737 kb on - strand at 1814.737 kb on - strand at 1814.737 kb on - strand at 1814.743 kb on + strand at 1814.743 kb on + strand at 1814.743 kb on + strand at 1814.827 kb on + strand at 1814.827 kb on + strand at 1814.827 kb on + strand at 1814.829 kb on + strand at 1814.830 kb on - strand at 1814.830 kb on - strand at 1814.830 kb on - strand at 1815.019 kb on + strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 1,813,298 + -0.1 1,813,298 + -1.3 1,813,298 + +0.4 1,813,298 + -1.0 1,813,298 + +0.6 1,813,298 + -1.0 1,813,298 + +0.3 1,813,299 - +0.3 1,813,324 + -1.5 1,813,324 + +0.2 1,813,324 + -0.9 1,813,324 + -0.7 1,813,324 + -0.9 1,813,325 - +0.5 1,813,325 - +0.0 1,813,325 - -1.3 1,813,338 + -0.1 1,813,338 + -0.9 1,813,405 - +0.6 1,814,607 + +0.3 1,814,654 + +0.1 1,814,655 - +1.1 1,814,736 + -0.1 1,814,736 + -0.5 1,814,737 - -0.8 1,814,737 - -0.0 1,814,737 - +0.6 1,814,743 + -1.5 1,814,743 + -0.4 1,814,743 + +1.3 1,814,827 + +0.2 1,814,827 + -0.2 1,814,827 + +0.1 1,814,829 + +0.1 1,814,830 - +0.8 1,814,830 - +0.7 1,814,830 - -1.6 1,815,019 + AO356_08105 0.15 +0.6 1,815,020 - AO356_08105 0.15 +0.4 1,815,020 - AO356_08105 0.15 +1.6 1,815,020 - AO356_08105 0.15 +0.1 1,815,310 + AO356_08105 0.37 -0.6 1,815,310 + AO356_08105 0.37 -0.0 1,815,310 + AO356_08105 0.37 +0.2 1,815,310 + AO356_08105 0.37 -0.0 1,815,311 - AO356_08105 0.37 -0.0 1,815,311 - AO356_08105 0.37 +0.3 1,815,311 - AO356_08105 0.37 +0.4 1,815,311 - AO356_08105 0.37 +1.1 1,815,311 - AO356_08105 0.37 +1.5 1,815,311 - AO356_08105 0.37 -0.0
Or see this region's nucleotide sequence