Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03420 and AO356_03425 are separated by 618 nucleotides AO356_03425 and AO356_03430 are separated by 176 nucleotides AO356_03430 and AO356_03435 are separated by 26 nucleotides AO356_03435 and AO356_03440 are separated by 144 nucleotides
AO356_03420: AO356_03420 - UDP-N-acetyl-D-glucosamine dehydrogenase, at 760,852 to 762,165
_03420
AO356_03425: AO356_03425 - chain-length determining protein, at 762,784 to 763,839
_03425
AO356_03430: AO356_03430 - hypothetical protein, at 764,016 to 764,240
_03430
AO356_03435: AO356_03435 - integration host factor subunit beta, at 764,267 to 764,563
_03435
AO356_03440: AO356_03440 - hypothetical protein, at 764,708 to 764,986
_03440
Position (kb) 762
763
764 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 761.828 kb on - strand, within AO356_03420 at 762.089 kb on + strand at 762.154 kb on + strand at 762.180 kb on - strand at 762.198 kb on - strand at 762.211 kb on + strand at 762.410 kb on + strand at 762.458 kb on + strand at 762.458 kb on + strand at 762.467 kb on + strand at 762.467 kb on + strand at 762.467 kb on + strand at 762.468 kb on - strand at 762.468 kb on - strand at 762.468 kb on - strand at 762.471 kb on + strand at 762.495 kb on + strand at 762.495 kb on + strand at 762.496 kb on - strand at 762.496 kb on - strand at 762.496 kb on - strand at 762.496 kb on - strand at 762.501 kb on - strand at 762.564 kb on - strand at 762.610 kb on + strand at 762.610 kb on + strand at 762.610 kb on + strand at 762.611 kb on - strand at 762.659 kb on + strand at 762.706 kb on - strand at 762.741 kb on + strand at 762.758 kb on - strand at 763.104 kb on + strand, within AO356_03425 at 763.123 kb on + strand, within AO356_03425 at 763.123 kb on + strand, within AO356_03425 at 763.124 kb on - strand, within AO356_03425 at 763.124 kb on - strand, within AO356_03425 at 763.125 kb on + strand, within AO356_03425 at 763.125 kb on + strand, within AO356_03425 at 763.147 kb on + strand, within AO356_03425 at 763.255 kb on - strand, within AO356_03425 at 763.255 kb on - strand, within AO356_03425 at 763.255 kb on - strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.346 kb on + strand, within AO356_03425 at 763.347 kb on - strand, within AO356_03425 at 763.347 kb on - strand, within AO356_03425 at 763.347 kb on - strand, within AO356_03425 at 763.347 kb on - strand, within AO356_03425 at 763.366 kb on - strand, within AO356_03425 at 763.366 kb on - strand, within AO356_03425 at 763.417 kb on - strand, within AO356_03425 at 763.438 kb on + strand, within AO356_03425 at 763.438 kb on + strand, within AO356_03425 at 763.438 kb on + strand, within AO356_03425 at 763.439 kb on - strand, within AO356_03425 at 763.463 kb on + strand, within AO356_03425 at 763.464 kb on - strand, within AO356_03425 at 763.515 kb on - strand, within AO356_03425 at 763.570 kb on + strand, within AO356_03425 at 763.571 kb on - strand, within AO356_03425 at 763.577 kb on + strand, within AO356_03425 at 763.595 kb on + strand, within AO356_03425 at 763.628 kb on + strand, within AO356_03425 at 763.629 kb on - strand, within AO356_03425 at 763.629 kb on - strand, within AO356_03425 at 763.629 kb on - strand, within AO356_03425 at 763.644 kb on + strand, within AO356_03425 at 763.669 kb on - strand, within AO356_03425 at 763.703 kb on + strand, within AO356_03425 at 763.703 kb on + strand, within AO356_03425 at 763.710 kb on - strand, within AO356_03425 at 763.894 kb on + strand at 763.895 kb on - strand at 763.934 kb on - strand at 763.934 kb on - strand at 763.986 kb on + strand at 763.987 kb on - strand at 763.998 kb on - strand at 764.010 kb on + strand at 764.011 kb on - strand at 764.017 kb on + strand at 764.018 kb on - strand at 764.030 kb on + strand at 764.067 kb on + strand, within AO356_03430 at 764.068 kb on - strand, within AO356_03430 at 764.068 kb on - strand, within AO356_03430 at 764.072 kb on + strand, within AO356_03430 at 764.072 kb on + strand, within AO356_03430 at 764.072 kb on + strand, within AO356_03430 at 764.073 kb on - strand, within AO356_03430 at 764.073 kb on - strand, within AO356_03430 at 764.170 kb on - strand, within AO356_03430 at 764.199 kb on + strand, within AO356_03430 at 764.199 kb on + strand, within AO356_03430 at 764.256 kb on + strand at 764.256 kb on + strand at 764.306 kb on - strand, within AO356_03435 at 764.306 kb on - strand, within AO356_03435 at 764.306 kb on - strand, within AO356_03435 at 764.385 kb on - strand, within AO356_03435 at 764.400 kb on + strand, within AO356_03435 at 764.613 kb on + strand at 764.614 kb on - strand at 764.645 kb on + strand at 764.645 kb on + strand at 764.645 kb on + strand at 764.645 kb on + strand at 764.646 kb on - strand at 764.646 kb on - strand at 764.731 kb on + strand at 764.732 kb on - strand at 764.732 kb on - strand at 764.732 kb on - strand at 764.732 kb on - strand at 764.732 kb on - strand at 764.742 kb on + strand, within AO356_03440 at 764.770 kb on - strand, within AO356_03440 at 764.814 kb on + strand, within AO356_03440 at 764.814 kb on + strand, within AO356_03440 at 764.815 kb on - strand, within AO356_03440
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 761,828 - AO356_03420 0.74 -2.8 762,089 + -2.0 762,154 + -0.7 762,180 - -0.1 762,198 - +0.0 762,211 + -2.3 762,410 + -1.1 762,458 + -1.0 762,458 + -0.3 762,467 + -0.7 762,467 + -0.6 762,467 + -0.9 762,468 - +0.5 762,468 - +1.1 762,468 - -0.0 762,471 + -2.4 762,495 + +0.1 762,495 + -2.8 762,496 - -0.5 762,496 - +1.2 762,496 - +0.2 762,496 - +0.7 762,501 - -0.0 762,564 - +0.1 762,610 + -0.3 762,610 + -0.7 762,610 + -1.2 762,611 - +0.8 762,659 + +0.2 762,706 - +0.9 762,741 + -0.2 762,758 - +0.3 763,104 + AO356_03425 0.30 +0.6 763,123 + AO356_03425 0.32 -1.4 763,123 + AO356_03425 0.32 -0.3 763,124 - AO356_03425 0.32 -1.5 763,124 - AO356_03425 0.32 -2.4 763,125 + AO356_03425 0.32 -1.3 763,125 + AO356_03425 0.32 -0.9 763,147 + AO356_03425 0.34 -2.6 763,255 - AO356_03425 0.45 -1.8 763,255 - AO356_03425 0.45 -0.3 763,255 - AO356_03425 0.45 -1.3 763,346 + AO356_03425 0.53 -1.3 763,346 + AO356_03425 0.53 -0.5 763,346 + AO356_03425 0.53 -0.3 763,346 + AO356_03425 0.53 -1.2 763,346 + AO356_03425 0.53 -0.5 763,346 + AO356_03425 0.53 -0.9 763,347 - AO356_03425 0.53 -1.1 763,347 - AO356_03425 0.53 -0.7 763,347 - AO356_03425 0.53 -1.5 763,347 - AO356_03425 0.53 -2.0 763,366 - AO356_03425 0.55 -0.2 763,366 - AO356_03425 0.55 -1.1 763,417 - AO356_03425 0.60 -1.7 763,438 + AO356_03425 0.62 -0.9 763,438 + AO356_03425 0.62 -1.0 763,438 + AO356_03425 0.62 -2.8 763,439 - AO356_03425 0.62 -1.7 763,463 + AO356_03425 0.64 -1.6 763,464 - AO356_03425 0.64 -1.7 763,515 - AO356_03425 0.69 -1.9 763,570 + AO356_03425 0.74 -2.6 763,571 - AO356_03425 0.75 -2.2 763,577 + AO356_03425 0.75 -1.9 763,595 + AO356_03425 0.77 -1.2 763,628 + AO356_03425 0.80 -1.9 763,629 - AO356_03425 0.80 +0.7 763,629 - AO356_03425 0.80 -0.3 763,629 - AO356_03425 0.80 -0.3 763,644 + AO356_03425 0.81 -0.7 763,669 - AO356_03425 0.84 -0.2 763,703 + AO356_03425 0.87 +0.2 763,703 + AO356_03425 0.87 -0.7 763,710 - AO356_03425 0.88 -2.1 763,894 + -1.5 763,895 - +1.0 763,934 - -0.2 763,934 - -0.3 763,986 + -1.2 763,987 - -3.3 763,998 - +0.4 764,010 + -1.4 764,011 - +0.0 764,017 + -0.1 764,018 - -0.6 764,030 + -2.6 764,067 + AO356_03430 0.23 -0.5 764,068 - AO356_03430 0.23 +1.6 764,068 - AO356_03430 0.23 +0.5 764,072 + AO356_03430 0.25 -1.0 764,072 + AO356_03430 0.25 +0.7 764,072 + AO356_03430 0.25 -2.4 764,073 - AO356_03430 0.25 -0.3 764,073 - AO356_03430 0.25 -1.3 764,170 - AO356_03430 0.68 -0.2 764,199 + AO356_03430 0.81 +0.2 764,199 + AO356_03430 0.81 -0.6 764,256 + -0.3 764,256 + -0.4 764,306 - AO356_03435 0.13 -0.2 764,306 - AO356_03435 0.13 +0.8 764,306 - AO356_03435 0.13 +0.2 764,385 - AO356_03435 0.40 -0.0 764,400 + AO356_03435 0.45 +0.5 764,613 + -0.0 764,614 - -0.6 764,645 + -0.5 764,645 + +0.7 764,645 + +0.4 764,645 + +0.0 764,646 - +0.5 764,646 - +0.9 764,731 + +0.1 764,732 - +0.0 764,732 - +0.1 764,732 - -0.6 764,732 - +1.9 764,732 - -1.5 764,742 + AO356_03440 0.12 +0.1 764,770 - AO356_03440 0.22 +0.1 764,814 + AO356_03440 0.38 -1.3 764,814 + AO356_03440 0.38 -0.3 764,815 - AO356_03440 0.38 -0.3
Or see this region's nucleotide sequence