Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01090 and AO356_01095 overlap by 1 nucleotides AO356_01095 and AO356_01100 are separated by 1 nucleotides
AO356_01090: AO356_01090 - glycolate oxidase subunit GlcD, at 248,116 to 249,615
_01090
AO356_01095: AO356_01095 - glycolate oxidase, at 249,615 to 250,673
_01095
AO356_01100: AO356_01100 - glycolate oxidase iron-sulfur subunit, at 250,675 to 251,895
_01100
Position (kb) 249
250
251 Strain fitness (log2 ratio) -2
-1
0
1 at 248.629 kb on + strand, within AO356_01090 at 248.630 kb on - strand, within AO356_01090 at 249.166 kb on + strand, within AO356_01090 at 249.166 kb on + strand, within AO356_01090 at 249.169 kb on + strand, within AO356_01090 at 249.170 kb on - strand, within AO356_01090 at 249.170 kb on - strand, within AO356_01090 at 249.245 kb on - strand, within AO356_01090 at 249.751 kb on + strand, within AO356_01095 at 249.751 kb on + strand, within AO356_01095 at 249.786 kb on + strand, within AO356_01095 at 249.786 kb on + strand, within AO356_01095 at 250.594 kb on + strand at 250.594 kb on + strand at 250.595 kb on - strand at 250.595 kb on - strand at 250.599 kb on + strand at 250.659 kb on + strand at 250.660 kb on - strand at 250.671 kb on + strand at 250.672 kb on - strand at 250.786 kb on + strand at 250.786 kb on + strand at 250.786 kb on + strand at 250.786 kb on + strand at 250.787 kb on - strand at 250.787 kb on - strand at 250.787 kb on - strand at 250.832 kb on - strand, within AO356_01100 at 250.832 kb on - strand, within AO356_01100 at 250.832 kb on - strand, within AO356_01100 at 250.912 kb on - strand, within AO356_01100 at 251.315 kb on - strand, within AO356_01100 at 251.446 kb on + strand, within AO356_01100
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 248,629 + AO356_01090 0.34 +0.5 248,630 - AO356_01090 0.34 +0.9 249,166 + AO356_01090 0.70 +0.5 249,166 + AO356_01090 0.70 +0.2 249,169 + AO356_01090 0.70 +0.8 249,170 - AO356_01090 0.70 -0.2 249,170 - AO356_01090 0.70 -0.5 249,245 - AO356_01090 0.75 +0.2 249,751 + AO356_01095 0.13 -0.1 249,751 + AO356_01095 0.13 -1.0 249,786 + AO356_01095 0.16 -2.1 249,786 + AO356_01095 0.16 -0.7 250,594 + +0.5 250,594 + +0.2 250,595 - -0.5 250,595 - +0.3 250,599 + -1.0 250,659 + -0.9 250,660 - -0.8 250,671 + +0.6 250,672 - -0.6 250,786 + +0.0 250,786 + -0.9 250,786 + +0.6 250,786 + +0.1 250,787 - -0.2 250,787 - +1.1 250,787 - -0.3 250,832 - AO356_01100 0.13 -0.0 250,832 - AO356_01100 0.13 -0.4 250,832 - AO356_01100 0.13 +0.9 250,912 - AO356_01100 0.19 -1.1 251,315 - AO356_01100 0.52 -0.1 251,446 + AO356_01100 0.63 -1.0
Or see this region's nucleotide sequence