Strain Fitness in Sinorhizobium meliloti 1021 around SMc04271

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,199,608	+		SMc04441	0.70	+0.7
2,199,609	-		SMc04441	0.71	+1.1
2,199,609	-		SMc04441	0.71	+3.0
2,199,609	-		SMc04441	0.71	-0.6
2,199,609	-		SMc04441	0.71	-1.6
2,199,952	+		SMc04269	0.61	+0.6
2,199,952	+		SMc04269	0.61	-1.6
2,199,953	-		SMc04269	0.62	-4.0
2,199,981	+		SMc04269	0.68	-0.1
2,199,981	+		SMc04269	0.68	+0.5
2,199,982	-		SMc04269	0.68	-3.6
2,200,080	-		SMc04269	0.89	-0.5
2,200,080	-		SMc04269	0.89	+1.3
2,200,186	+				+1.0
2,200,187	-				-0.4
2,200,187	-				+0.6
2,200,187	-				-1.0
2,200,202	-				+0.9
2,200,284	-		SMc04364	0.53	+0.1
2,200,357	-				+0.9
2,200,479	-				+1.4
2,200,524	-				-0.7
2,200,717	+		SMc04271	0.29	-3.1
2,200,717	+		SMc04271	0.29	-1.5
2,200,746	+		SMc04271	0.32	-2.1
2,200,746	+		SMc04271	0.32	-0.4
2,200,747	-		SMc04271	0.33	-1.3
2,200,747	-		SMc04271	0.33	-1.1
2,200,844	+		SMc04271	0.43	+0.7
2,200,845	-		SMc04271	0.43	-0.0
2,201,117	+		SMc04271	0.73	-1.2
2,201,118	-		SMc04271	0.73	-1.0
2,201,118	-		SMc04271	0.73	+0.5
2,201,255	-		SMc04271	0.88	-1.5
2,201,343	+				-0.5
2,201,343	+				+1.3
2,201,343	+				-0.4
2,201,343	+				+0.1
2,201,344	-				-0.5
2,201,344	-				+0.4
2,201,365	+				-0.8
2,201,365	+				-0.6
2,201,365	+				-1.2
2,201,365	+				+1.2
2,201,365	+				-0.6
2,201,365	+				+0.3
2,201,365	+				+0.7
2,201,365	+				-0.6
2,201,366	-				+1.7
2,201,366	-				-0.3
2,201,366	-				-0.1
2,201,378	-				-1.0
2,201,400	+				-0.1
2,201,401	-				-0.1
2,201,613	+				+1.7
2,201,613	+				+0.6
2,201,613	+				-0.2
2,201,613	+				-2.4
2,201,613	+				-0.7
2,201,614	-				+0.1
2,201,614	-				+0.5
2,201,906	+		SMc04272	0.49	-0.6
2,201,994	+		SMc04272	0.60	-1.4
2,201,994	+		SMc04272	0.60	+0.7
2,201,995	-		SMc04272	0.60	-0.5
2,202,044	+		SMc04272	0.67	-0.8
2,202,045	-		SMc04272	0.67	-0.7
2,202,054	+		SMc04272	0.68	-0.0
2,202,054	+		SMc04272	0.68	+0.1
2,202,055	-		SMc04272	0.68	-0.2
2,202,106	+		SMc04272	0.75	-2.8
2,202,124	+		SMc04272	0.78	-1.3
2,202,124	+		SMc04272	0.78	-0.7
2,202,125	-		SMc04272	0.78	-0.4
2,202,125	-		SMc04272	0.78	+0.4
2,202,125	-		SMc04272	0.78	+0.9
2,202,217	+				-0.0
2,202,217	+				+1.7
2,202,217	+				+0.4
2,202,217	+				-0.8
2,202,217	+				-0.8
2,202,217	+				+0.4
2,202,217	+				+0.1
2,202,218	-				-0.4
2,202,218	-				+0.4
2,202,218	-				+0.8
2,202,218	-				-0.0
2,202,218	-				+0.7
2,202,218	-				-0.7
2,202,218	-				-0.4