Strain Fitness in Sinorhizobium meliloti 1021 around SMc04028

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,025,820	-		SMc04026	0.46	+0.3
3,025,820	-		SMc04026	0.46	-0.8
3,025,898	-		SMc04026	0.52	-0.9
3,026,048	-		SMc04026	0.62	-2.0
3,026,201	+		SMc04026	0.72	-1.8
3,026,202	-		SMc04026	0.72	-1.0
3,026,202	-		SMc04026	0.72	-2.1
3,026,203	+		SMc04026	0.72	-1.4
3,026,203	+		SMc04026	0.72	-0.8
3,026,204	-		SMc04026	0.73	-1.0
3,026,215	+		SMc04026	0.73	-1.4
3,026,216	-		SMc04026	0.73	-1.6
3,026,384	-		SMc04026	0.85	-1.0
3,026,446	+		SMc04026	0.89	-0.8
3,026,592	-				-2.6
3,026,606	+				-1.2
3,026,606	+				-0.4
3,026,607	-				-1.5
3,026,607	-				-0.9
3,026,607	-				-1.2
3,026,607	-				+1.3
3,026,607	-				-0.5
3,026,607	-				-0.0
3,026,760	-				-0.9
3,026,760	-				-0.2
3,026,841	+				-0.1
3,026,842	-				-0.1
3,026,843	+				-2.7
3,026,844	-				-0.5
3,026,844	-				-0.8
3,026,844	-				-0.8
3,026,844	-				-1.4
3,027,050	+				+1.2
3,027,051	-				-0.0
3,027,128	+				-3.0
3,027,129	-				+0.7
3,027,219	-		SMc04028	0.11	-1.1
3,027,219	-		SMc04028	0.11	-0.8
3,027,219	-		SMc04028	0.11	+0.4
3,027,252	+		SMc04028	0.12	-2.2
3,027,253	-		SMc04028	0.12	-2.5
3,027,344	+		SMc04028	0.14	-1.1
3,027,635	+		SMc04028	0.20	-1.2
3,027,635	+				+1.1
3,027,636	-		SMc04028	0.20	-1.9
3,027,818	+		SMc04028	0.24	-0.7
3,027,897	+		SMc04028	0.25	-2.0
3,027,897	+		SMc04028	0.25	-2.5
3,027,898	-		SMc04028	0.25	-1.1
3,027,898	-		SMc04028	0.25	-1.6
3,028,057	-		SMc04028	0.29	-0.9
3,028,057	-		SMc04028	0.29	-1.6
3,028,229	-		SMc04028	0.32	-1.3
3,028,278	-		SMc04028	0.33	-2.0
3,028,308	-		SMc04028	0.34	-1.7
3,028,470	-		SMc04028	0.37	+0.0
3,028,470	-		SMc04028	0.37	-0.7
3,028,557	-		SMc04028	0.39	-2.5
3,028,633	-		SMc04028	0.41	-0.5
3,028,765	+		SMc04028	0.44	-1.7
3,028,919	+		SMc04028	0.47	-2.3
3,028,919	+		SMc04028	0.47	+0.1
3,028,920	-		SMc04028	0.47	-0.8
3,029,052	-		SMc04028	0.50	-3.3
3,029,052	-		SMc04028	0.50	-1.5
3,029,052	-		SMc04028	0.50	-1.9
3,029,052	-		SMc04028	0.50	-0.9
3,029,108	+		SMc04028	0.51	-2.4
3,029,117	+		SMc04028	0.51	-0.8
3,029,118	-		SMc04028	0.51	-1.3
3,029,183	+		SMc04028	0.52	-0.4
3,029,184	-				+0.8
3,029,261	+		SMc04028	0.54	-0.8
3,029,285	+		SMc04028	0.55	-1.1
3,029,466	-		SMc04028	0.58	-0.8
3,029,549	+		SMc04028	0.60	-0.0
3,029,550	-		SMc04028	0.60	-0.2
3,029,789	+		SMc04028	0.65	-1.5
3,029,789	+		SMc04028	0.65	-1.7
3,029,790	-		SMc04028	0.65	-0.5
3,029,790	-		SMc04028	0.65	-1.4
3,029,790	-		SMc04028	0.65	-1.3
3,029,795	+		SMc04028	0.65	-1.1
3,029,795	+		SMc04028	0.65	-0.9
3,029,796	-		SMc04028	0.65	-1.3
3,029,914	-		SMc04028	0.68	-0.5
3,029,914	-		SMc04028	0.68	-0.2
3,030,251	-		SMc04028	0.75	-1.6
3,030,317	+		SMc04028	0.76	-1.5
3,030,317	+		SMc04028	0.76	-3.1
3,030,318	-		SMc04028	0.76	-2.5
3,030,323	+		SMc04028	0.77	+0.4
3,030,324	-		SMc04028	0.77	-1.6
3,030,324	-		SMc04028	0.77	+0.1
3,030,324	-		SMc04028	0.77	-0.3
3,030,324	-		SMc04028	0.77	-0.6
3,030,324	-		SMc04028	0.77	-1.7
3,030,470	+		SMc04028	0.80	-2.3
3,030,568	-		SMc04028	0.82	-0.6
3,030,599	+		SMc04028	0.82	-0.9
3,030,698	+		SMc04028	0.85	-1.0
3,030,698	+		SMc04028	0.85	-2.7
3,030,699	-		SMc04028	0.85	-1.0
3,030,701	+		SMc04028	0.85	-2.5
3,030,701	+		SMc04028	0.85	-3.4
3,030,702	-		SMc04028	0.85	-1.4
3,030,702	-				+0.4
3,030,717	-		SMc04028	0.85	-0.7
3,030,737	+		SMc04028	0.85	-1.5
3,030,770	+		SMc04028	0.86	-1.3
3,030,770	+		SMc04028	0.86	-1.6
3,030,770	+		SMc04028	0.86	-2.4
3,030,771	-		SMc04028	0.86	-2.7
3,030,771	-		SMc04028	0.86	+0.0
3,030,771	-		SMc04028	0.86	-1.8
3,030,771	-		SMc04028	0.86	-2.4
3,030,803	+		SMc04028	0.87	-2.2
3,030,804	-		SMc04028	0.87	-1.0
3,031,064	+				-1.1
3,031,077	-				-1.4
3,031,317	-				-0.5
3,031,464	+				-1.2
3,031,465	-				+0.3
3,031,593	+				-0.9
3,031,594	-				+0.3
3,031,862	-				+0.4
3,031,910	+				+1.2
3,031,910	+				+0.6
3,031,910	+				+0.2
3,031,911	-				-0.5
3,031,911	-				-0.1
3,031,945	+				+0.7
3,031,988	+				+0.7
3,031,988	+				-1.3
3,031,988	+				+0.9
3,031,988	+				-1.1
3,031,988	+				-0.5
3,031,989	-				-2.1
3,031,989	-				-0.7
3,031,998	-				+0.2
3,032,083	-				+0.6