Strain Fitness in Sinorhizobium meliloti 1021 around SMc03978
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,973,138 | - | -3.2 | |||
2,973,141 | - | +0.6 | |||
2,973,318 | + | -1.1 | |||
2,973,318 | + | -3.4 | |||
2,973,354 | + | -1.7 | |||
2,973,618 | - | SMc03978 | 0.11 | -2.3 | |
2,973,839 | + | SMc03978 | 0.22 | -2.3 | |
2,973,841 | + | SMc03978 | 0.22 | -1.5 | |
2,973,842 | - | SMc03978 | 0.23 | -1.0 | |
2,973,846 | - | SMc03978 | 0.23 | -2.9 | |
2,974,497 | + | SMc03978 | 0.56 | -0.6 | |
2,974,546 | + | SMc03978 | 0.58 | -0.5 | |
2,974,547 | - | SMc03978 | 0.58 | -2.7 | |
2,975,303 | + | -2.0 | |||
2,975,315 | + | -2.0 | |||
2,975,332 | + | -2.8 | |||
2,975,446 | + | -0.4 | |||
2,975,994 | - | SMc03979 | 0.54 | +1.7 | |
2,975,994 | - | SMc03979 | 0.54 | -0.9 | |
2,976,275 | + | SMc03979 | 0.82 | -0.9 | |
2,976,276 | - | SMc03979 | 0.82 | -1.8 |
Or see this region's nucleotide sequence