Strain Fitness in Sinorhizobium meliloti 1021 around SMc03938

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,087,848	+		SMc03937	0.39	+0.1
3,087,848	+				+3.8
3,087,849	-		SMc03937	0.39	+0.1
3,087,849	-		SMc03937	0.39	-0.7
3,087,854	+		SMc03937	0.39	+1.5
3,087,855	-		SMc03937	0.39	-0.6
3,087,986	+		SMc03937	0.50	-0.2
3,087,986	+		SMc03937	0.50	+0.3
3,088,088	+		SMc03937	0.58	-0.8
3,088,089	-		SMc03937	0.58	+0.5
3,088,098	+		SMc03937	0.59	-0.4
3,088,191	+		SMc03937	0.66	-0.0
3,088,192	-		SMc03937	0.66	+0.2
3,088,201	+		SMc03937	0.67	+0.2
3,088,350	-		SMc03937	0.78	+1.0
3,088,379	+		SMc03937	0.81	-2.0
3,088,379	+		SMc03937	0.81	+1.4
3,088,380	-		SMc03937	0.81	+0.9
3,088,637	+				-1.1
3,088,637	+				-0.7
3,088,637	+				-0.5
3,088,638	-				+0.8
3,088,680	+				-0.2
3,088,681	-				-2.7
3,088,767	-				+1.4
3,089,007	+		SMc03938	0.12	+0.1
3,089,064	-		SMc03938	0.17	+1.0
3,089,070	+		SMc03938	0.17	+0.7
3,089,071	-		SMc03938	0.17	-1.0
3,089,202	+		SMc03938	0.26	-0.4
3,089,460	+		SMc03938	0.45	+0.3
3,089,460	+		SMc03938	0.45	+1.4
3,089,460	+		SMc03938	0.45	-1.1
3,089,460	+		SMc03938	0.45	-0.8
3,089,461	-		SMc03938	0.45	-1.2
3,089,461	-		SMc03938	0.45	+0.5
3,089,461	-		SMc03938	0.45	-0.2
3,089,461	-		SMc03938	0.45	+0.7
3,089,559	+		SMc03938	0.52	-0.1
3,089,559	+		SMc03938	0.52	-2.1
3,089,560	-		SMc03938	0.52	-1.8
3,089,756	-		SMc03938	0.66	+0.8
3,089,756	-		SMc03938	0.66	+1.3
3,089,907	+		SMc03938	0.77	+0.1
3,089,908	-		SMc03938	0.77	-0.6
3,090,008	-		SMc03938	0.84	+1.9
3,090,010	-		SMc03938	0.84	-0.0
3,090,094	+				-0.6
3,090,094	+				+0.2
3,090,126	+				-0.9
3,090,126	+				+0.3
3,090,127	-				-0.5
3,090,130	+				-0.9
3,090,130	+				+0.4
3,090,320	+		SMc03939	0.19	+0.2
3,090,437	-		SMc03939	0.47	+0.1
3,090,437	-		SMc03939	0.47	+0.7
3,090,437	-		SMc03939	0.47	+0.5
3,090,468	+		SMc03939	0.55	+0.1
3,090,468	+		SMc03939	0.55	+0.1
3,090,468	+		SMc03939	0.55	-0.9
3,090,469	-		SMc03939	0.55	+0.3
3,090,577	-		SMc03939	0.82	+1.1
3,090,655	+				-1.4
3,090,656	-				+0.4
3,090,814	+		SMc03950	0.14	-1.2
3,091,115	-		SMc03950	0.40	+1.4
3,091,185	+		SMc03950	0.46	-1.6
3,091,186	-		SMc03950	0.46	-0.8