Strain Fitness in Sinorhizobium meliloti 1021 around SMc03871
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,534,750 | + | SMc03870 | 0.41 | -1.4 | |
3,534,751 | - | SMc03870 | 0.41 | +0.9 | |
3,534,950 | - | SMc03870 | 0.54 | -0.3 | |
3,534,995 | + | SMc03870 | 0.56 | -1.4 | |
3,535,210 | + | SMc03870 | 0.70 | -0.4 | |
3,535,211 | - | SMc03870 | 0.70 | -1.0 | |
3,535,564 | - | +1.4 | |||
3,535,581 | + | -1.1 | |||
3,535,582 | - | -2.4 | |||
3,535,682 | + | -0.5 | |||
3,535,683 | - | -0.3 | |||
3,535,728 | + | -0.1 | |||
3,535,930 | - | SMc03871 | 0.33 | -0.0 | |
3,535,942 | + | SMc03871 | 0.35 | -2.9 | |
3,535,942 | + | SMc03871 | 0.35 | -1.9 | |
3,535,942 | + | SMc03871 | 0.35 | -0.4 | |
3,535,943 | - | SMc03871 | 0.35 | -0.5 | |
3,535,943 | - | SMc03871 | 0.35 | -0.1 | |
3,536,251 | - | SMc03871 | 0.78 | -1.3 | |
3,536,411 | - | +0.6 | |||
3,536,411 | - | +1.0 | |||
3,536,509 | + | -1.0 | |||
3,536,563 | - | +2.8 |
Or see this region's nucleotide sequence