Strain Fitness in Sinorhizobium meliloti 1021 around SMc03236
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,344,375 | + | -0.1 | |||
3,344,375 | + | -0.2 | |||
3,344,563 | + | SMc03235 | 0.35 | -1.6 | |
3,344,563 | + | SMc03235 | 0.35 | -3.3 | |
3,344,563 | + | SMc03235 | 0.35 | -0.8 | |
3,344,564 | - | SMc03235 | 0.35 | -0.7 | |
3,344,564 | - | SMc03235 | 0.35 | -1.3 | |
3,344,639 | - | SMc03235 | 0.51 | -1.2 | |
3,344,657 | + | SMc03235 | 0.55 | -1.9 | |
3,344,658 | - | SMc03235 | 0.55 | -0.2 | |
3,345,309 | + | SMc03236 | 0.57 | -0.7 | |
3,345,309 | + | SMc03236 | 0.57 | -0.6 | |
3,345,375 | + | SMc03236 | 0.66 | +0.5 | |
3,346,002 | + | SMc03237 | 0.15 | +0.5 | |
3,346,002 | + | SMc03237 | 0.15 | -0.0 | |
3,346,020 | + | SMc03237 | 0.17 | -0.4 | |
3,346,062 | + | SMc03237 | 0.20 | +0.0 | |
3,346,063 | - | SMc03237 | 0.20 | -0.1 | |
3,346,063 | - | SMc03237 | 0.20 | +0.4 | |
3,346,076 | - | SMc03237 | 0.21 | -0.6 | |
3,346,195 | + | SMc03237 | 0.31 | -0.7 | |
3,346,195 | + | SMc03237 | 0.31 | -2.3 | |
3,346,195 | + | SMc03237 | 0.31 | +1.1 | |
3,346,411 | + | SMc03237 | 0.48 | +1.6 | |
3,346,412 | - | SMc03237 | 0.48 | +1.1 |
Or see this region's nucleotide sequence