Strain Fitness in Sinorhizobium meliloti 1021 around SMc03109

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,230,125	+		SMc03111	0.70	+1.8
3,230,125	+		SMc03111	0.70	+1.4
3,230,125	+		SMc03111	0.70	-0.5
3,230,179	+		SMc03111	0.75	+1.2
3,230,179	+		SMc03111	0.75	+1.1
3,230,180	-		SMc03111	0.75	+0.2
3,230,200	+		SMc03111	0.77	+0.1
3,230,201	-		SMc03111	0.77	+2.7
3,230,201	-		SMc03111	0.77	-0.9
3,230,215	+		SMc03111	0.78	+1.5
3,230,216	-		SMc03111	0.78	+0.0
3,230,287	+		SMc03111	0.84	+1.8
3,230,456	+				+1.0
3,230,456	+				+1.6
3,230,714	+		SMc03110	0.47	-0.7
3,230,715	-		SMc03110	0.48	-0.2
3,230,801	+		SMc03110	0.65	+1.1
3,230,801	+		SMc03110	0.65	+1.0
3,230,802	-		SMc03110	0.65	-0.1
3,230,802	-		SMc03110	0.65	+1.2
3,230,802	-		SMc03110	0.65	+0.0
3,230,802	-		SMc03110	0.65	-0.8
3,230,802	-		SMc03110	0.65	-0.2
3,230,802	-		SMc03110	0.65	-2.1
3,230,965	+				+0.8
3,230,965	+				+0.9
3,230,965	+				+0.6
3,230,965	+				+1.7
3,230,965	+				+2.6
3,230,966	-				-1.4
3,230,966	-				+0.9
3,230,966	-				-3.0
3,230,966	-				-0.1
3,231,143	+		SMc03109	0.10	+2.0
3,231,143	+		SMc03109	0.10	-0.9
3,231,143	+		SMc03109	0.10	-1.6
3,231,144	-		SMc03109	0.11	-0.0
3,231,144	-		SMc03109	0.11	-0.2
3,231,282	-		SMc03109	0.26	-0.3
3,231,395	+		SMc03109	0.39	-0.4
3,231,395	+		SMc03109	0.39	+1.1
3,231,395	+		SMc03109	0.39	+0.2
3,231,395	+		SMc03109	0.39	+0.6
3,231,395	+		SMc03109	0.39	-0.3
3,231,395	+		SMc03109	0.39	+0.4
3,231,396	-		SMc03109	0.39	+0.6
3,231,396	-		SMc03109	0.39	+1.3
3,231,396	-		SMc03109	0.39	+1.0
3,231,396	-		SMc03109	0.39	-0.4
3,231,473	+		SMc03109	0.47	-1.1
3,231,815	-		SMc03109	0.85	+1.0
3,231,947	+				-0.1
3,231,947	+				+0.1
3,231,947	+				+0.2
3,231,947	+				-0.3
3,231,948	-				-0.8
3,231,948	-				-0.1
3,231,948	-				+0.2
3,231,948	-				+1.0
3,232,019	+				-0.0
3,232,019	+				-1.1
3,232,118	+				-2.4
3,232,126	+				-1.5
3,232,243	+				-0.9
3,232,255	+				-0.0
3,232,255	+				+0.7
3,232,256	-				-0.0
3,232,713	+				-1.3
3,232,714	-				-2.4
3,232,714	-				+0.7
3,232,746	+		SMc03108	0.12	-2.5
3,232,746	+		SMc03108	0.12	-0.1
3,232,747	-				-0.7
3,232,747	-		SMc03108	0.12	-1.2
3,232,794	+		SMc03108	0.16	+0.6
3,232,795	-		SMc03108	0.16	-0.2
3,232,795	-		SMc03108	0.16	-0.8
3,232,874	+		SMc03108	0.23	+0.5
3,232,875	-		SMc03108	0.23	+0.1
3,232,875	-		SMc03108	0.23	-1.4
3,232,875	-		SMc03108	0.23	+1.7
3,232,932	-		SMc03108	0.28	-1.9