Strain Fitness in Sinorhizobium meliloti 1021 around SMc03085

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,261,255	+		SMc03087	0.72	-0.4
3,261,255	+		SMc03087	0.72	-0.9
3,261,414	+		SMc03087	0.81	-1.3
3,261,414	+		SMc03087	0.81	-0.1
3,261,414	+		SMc03087	0.81	+0.2
3,261,414	+		SMc03087	0.81	+0.3
3,261,694	-				-1.9
3,261,790	+				+0.1
3,261,816	+				-0.8
3,261,816	+				-0.1
3,261,816	+				+2.7
3,261,816	+				-0.7
3,261,816	+				-1.7
3,261,816	+				+1.5
3,261,817	-				+0.3
3,261,817	-				+0.9
3,261,817	-				-0.5
3,261,817	-				+0.4
3,261,817	-				-0.5
3,261,858	+				-0.2
3,261,858	+				-0.8
3,261,911	+				-0.6
3,261,912	-				+0.1
3,261,912	-				+0.4
3,261,986	-		SMc03086	0.36	-0.5
3,262,023	+		SMc03086	0.52	-0.1
3,262,023	+		SMc03086	0.52	-1.8
3,262,105	+		SMc03086	0.87	-0.3
3,262,107	+		SMc03086	0.88	-1.7
3,262,107	+		SMc03086	0.88	+0.8
3,262,108	-		SMc03086	0.88	+0.4
3,262,159	+				-0.1
3,262,505	+		SMc03085	0.40	+0.1
3,262,505	+		SMc03085	0.40	-0.0
3,262,505	+		SMc03085	0.40	+0.0
3,262,505	+		SMc03085	0.40	+0.6
3,262,506	-		SMc03085	0.40	-2.0
3,262,506	-		SMc03085	0.40	-0.9
3,262,506	-		SMc03085	0.40	-0.7
3,262,506	-		SMc03085	0.40	+0.1
3,262,506	-		SMc03085	0.40	+0.8
3,262,657	+		SMc03085	0.58	+1.1
3,262,780	+		SMc03085	0.72	-0.0
3,262,780	+		SMc03085	0.72	+1.0
3,262,780	+		SMc03085	0.72	+0.1
3,262,781	-		SMc03085	0.72	-0.2
3,262,781	-		SMc03085	0.72	+0.6
3,262,895	+		SMc03085	0.85	-0.2
3,262,896	-		SMc03085	0.85	+0.1
3,262,896	-		SMc03085	0.85	-0.3
3,263,036	-				-2.3
3,263,092	+				-0.1
3,263,093	-				+1.4
3,263,152	+				-0.7
3,263,181	-				-0.4
3,263,231	+				-0.6
3,263,231	+				+0.3
3,263,231	+				+1.7
3,263,232	-				+0.4
3,263,232	-				-1.0
3,263,232	-				-2.2
3,263,234	-				-1.0
3,263,422	+		SMc04444	0.13	+1.0
3,263,494	+		SMc04444	0.16	-1.6
3,263,618	-		SMc04444	0.20	-1.0
3,263,683	+		SMc04444	0.23	-0.1
3,263,683	+		SMc04444	0.23	-0.2
3,263,684	-		SMc04444	0.23	-0.2
3,263,684	-		SMc04444	0.23	+0.3
3,263,851	+		SMc04444	0.28	-1.8
3,263,852	-		SMc04444	0.28	+0.5
3,263,949	+		SMc04444	0.32	-0.4
3,263,949	+		SMc04444	0.32	+1.6
3,263,950	-		SMc04444	0.32	+0.0
3,263,968	+		SMc04444	0.32	-0.7
3,263,969	-		SMc04444	0.32	+0.0
3,263,969	-		SMc04444	0.32	+0.1