Strain Fitness in Sinorhizobium meliloti 1021 around SMc02894
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
250,411 | - | +1.2 | |||
250,411 | - | +0.3 | |||
250,411 | - | +0.2 | |||
251,054 | + | SMc02893 | 0.68 | +1.0 | |
251,054 | + | SMc02893 | 0.68 | -0.2 | |
251,055 | - | SMc02893 | 0.68 | -0.1 | |
251,091 | - | SMc02893 | 0.72 | -1.2 | |
251,099 | - | SMc02893 | 0.73 | -0.5 | |
251,470 | - | SMc02894 | 0.40 | -1.2 | |
251,521 | - | SMc02894 | 0.59 | -1.3 | |
251,537 | + | SMc02894 | 0.65 | -1.1 | |
251,609 | + | -1.5 | |||
251,610 | - | -1.3 | |||
251,719 | + | -0.4 | |||
251,719 | + | +0.4 | |||
251,720 | - | +1.0 | |||
251,786 | + | +0.9 | |||
251,787 | - | +1.7 | |||
251,787 | - | +1.7 | |||
251,806 | - | +1.4 | |||
251,860 | + | -1.5 | |||
251,861 | - | +1.0 | |||
252,039 | + | SMc02895 | 0.22 | +0.0 | |
252,040 | - | SMc02895 | 0.22 | +2.2 | |
252,163 | + | SMc02895 | 0.35 | -0.9 | |
252,505 | - | SMc02895 | 0.71 | +0.9 | |
252,505 | - | SMc02895 | 0.71 | +0.4 |
Or see this region's nucleotide sequence