Strain Fitness in Sinorhizobium meliloti 1021 around SMc02477
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,320,174 | + | SMc02478 | 0.46 | -1.5 | |
3,320,460 | + | SMc02478 | 0.71 | +1.6 | |
3,320,460 | + | SMc02478 | 0.71 | +1.6 | |
3,320,460 | + | SMc02478 | 0.71 | +1.0 | |
3,320,460 | + | SMc02478 | 0.71 | +2.1 | |
3,320,461 | - | SMc02478 | 0.71 | +2.9 | |
3,320,461 | - | SMc02478 | 0.71 | +2.4 | |
3,320,461 | - | SMc02478 | 0.71 | +2.2 | |
3,320,585 | - | SMc02478 | 0.82 | +1.0 | |
3,320,586 | + | SMc02478 | 0.82 | -2.6 | |
3,320,586 | + | SMc02478 | 0.82 | +2.5 | |
3,320,586 | + | SMc02478 | 0.82 | +2.2 | |
3,320,586 | + | SMc02478 | 0.82 | +3.5 | |
3,320,587 | - | SMc02478 | 0.82 | +2.7 | |
3,320,587 | - | SMc02478 | 0.82 | +0.0 | |
3,320,587 | - | SMc02478 | 0.82 | -1.9 | |
3,320,587 | - | SMc02478 | 0.82 | +3.0 | |
3,320,587 | - | SMc02478 | 0.82 | +3.7 | |
3,320,587 | - | SMc02478 | 0.82 | +1.9 | |
3,320,809 | - | -0.6 | |||
3,320,809 | - | -2.9 | |||
3,321,141 | + | SMc02476 | 0.10 | -1.2 | |
3,321,142 | - | SMc02476 | 0.10 | +1.4 | |
3,321,202 | - | SMc02476 | 0.32 | +0.5 | |
3,321,502 | + | -0.2 | |||
3,321,518 | - | -0.5 |
Or see this region's nucleotide sequence