Strain Fitness in Sinorhizobium meliloti 1021 around SMc02405
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,156,148 | + | +0.7 | |||
1,157,564 | + | -1.8 | |||
1,157,564 | + | -0.3 | |||
1,157,564 | + | -0.0 | |||
1,157,564 | + | -2.6 | |||
1,157,564 | + | -3.8 | |||
1,157,565 | - | -1.4 | |||
1,157,566 | + | -1.3 | |||
1,157,566 | + | -1.1 | |||
1,157,566 | + | -0.8 | |||
1,157,567 | - | +0.7 | |||
1,157,567 | - | +0.4 | |||
1,157,567 | - | -0.9 | |||
1,157,841 | + | +0.1 | |||
1,157,841 | + | +1.6 | |||
1,157,993 | + | +2.0 | |||
1,157,993 | + | +1.5 | |||
1,157,993 | + | -2.4 | |||
1,158,090 | + | -2.1 | |||
1,158,091 | - | -2.3 | |||
1,158,164 | + | -0.6 | |||
1,158,171 | + | +0.3 | |||
1,158,172 | - | -1.5 | |||
1,158,219 | + | -1.0 | |||
1,158,228 | + | +0.6 | |||
1,158,249 | + | -0.3 | |||
1,158,249 | + | -0.7 | |||
1,158,249 | + | +0.6 | |||
1,158,250 | - | -0.0 | |||
1,158,250 | - | +0.0 | |||
1,158,348 | + | -1.8 | |||
1,158,348 | + | -0.2 | |||
1,158,348 | + | -0.0 | |||
1,158,348 | + | -1.9 | |||
1,158,351 | - | -0.7 | |||
1,158,351 | - | +0.5 | |||
1,158,451 | + | +0.4 | |||
1,158,451 | + | -2.2 | |||
1,158,518 | - | -1.4 | |||
1,158,518 | - | -0.6 | |||
1,158,518 | - | +0.8 | |||
1,158,520 | + | -2.4 | |||
1,158,521 | - | +0.7 |
Or see this region's nucleotide sequence